Zea mays (maize): 103627891
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Entry
103627891 CDS
T01088
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103627891
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zma04812
]
103627891
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
103627891
Cytoskeleton proteins [BR:
zma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
103627891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EZ
HEAT_GCN1
HEAT_EF3_N
TPR_CAND1
XMAP215_CLASP_TOG
Cnd1
HEAT
TPR_DNAAF5
Adaptin_N
HEAT_MROH2B_C
Vac14_Fab1_bd
HEAT_DAAF5
INTS1_R4
UTP20
Tti2
MMS19_C
Motif
Other DBs
NCBI-GeneID:
103627891
NCBI-ProteinID:
XP_008646419
LinkDB
All DBs
Position
5:224033166..224042210
Genome browser
AA seq
1313 aa
AA seq
DB search
MAMPPAAVARLRELVPAPGTEEELELDVAGAAALVECCSGLLRPGGGGDGDAGAALEALE
ALCAAGGGGAMRRHADGLAPLVVARLGDGHAAVREAARRYLVLLMEMKEMNARTENTEPN
SNVPNDQHVHYTTIEMESSNTSQARKNSKEKVSARDISLLAGEGDITRKLVEPIKVFSEK
DLLREIGKVVSTLQPDNEWSIRITAMQRVEGLVLGGAADYSAFPMLLKQLMTPLITQLLD
RRSSVVKQACHLLNFLSKELLRDFEPYAELLIPVLLKNVVITILVIAESADNCIKEMLRN
CKVARILPRIIEFAKNDRSAVLRARCCEYATLMLEYWVDTPEIQRSADLYEDLIKCCIAD
ATSEVRSSARACYRMFSRIWPDRSHQLYSSFEPPRQKMINDEDTETPQAHLPPVKISHLQ
PSSFVPAVIDKVVKVDSGISFSSGDLQTSDILYLQCDDIIAKGLDAGNNDDTLTIGSSFE
DKITLRELETRDRDTEKNDSGNSTGVNSSARDQPTATPITIEAPSEMSLDDATVVTIVQD
KAECKLNVEPINQQVQAQEDPSDLTCLSPAVNSKGAGNLLKENPVEVSSDAGSSGKVGTH
KKSAVSKKPRGSYTPNFRRPLLSKQMTNWFYASTKSDIHEKQLILGEMVNNMDVPSSITE
ALSLGLNPRSDWMMKVYAFSFLRQCLLERGSKGTQEVAQNFEKVMRLVCRYLDDPHHKVA
HAALSSLADIMPVFKKPFEHYLDKTLPHIFSRLNDPKESIKQQCLAILKHANESYPIDSL
LPALLRSLDEQKSPKSKLAVLEFANASFVKCEVNSESYCSSSFLKPWFGKLAHLFNDKNK
KLKEVTVVGFSSIYSHYDPTSMLSFLVTLSMEEQKRLKRAMKQLIPSIESDMEEFLQQKR
HKQKTPSFDIFTAKSPLHPAFQSAKSPLHPAHRSSKSPLHPRFAESPGHSAYKYAKSPLH
PSYQPANSPLHPSYQSNYVKADDCFSSALQCLPDTSLEVQEDRTGRIEIESPNKSYGHKA
EMMDKKSCTVRSKNDLPRRSDFSVISNNIVQNASSRDSRSTKILDEPNDSELHINTRKNK
VTRTRNDLQDHENLHQMSSSLLEMLDDPDMATRELALSLLAEILEKHQKAMENCVELLVV
KLLHATKDGALKVMHSCSAWFGSHLLVQPQSWHLKPLFMSLSLQVVNQAHICLTTVVTQF
DPLRCLGAIASQLASQDEKVLIVSINSLSKLVMRFSEDNLMAHLPTFLPALVDASKNRSP
YVRKAAMVCVVDAYLKLGPALLPYLEGLDSAQLQLITTHASRLSQARLIASDG
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccacccgccgcggtggcgcggctgcgggagctggtgccggcgccggggacg
gaggaggagctggagctcgacgtcgccggcgcggccgcgctcgtcgagtgctgctccggc
ctcctccgccctggcggcggcggtgacggcgacgccggggccgcgctcgaggcgctcgag
gcactctgcgctgcgggcggagggggcgcgatgcgccgccatgccgatgggctcgctccg
ctggtcgtcgcgcgcctcggcgacggacacgcggccgtgcgggaggccgcgaggaggtac
ctcgtgctgctcatggagatgaaggagatgaatgcaagaacggaaaacacagagccaaac
tcaaacgtgccaaatgaccaacacgttcactatacgacaatcgaaatggaatcttctaat
accagccaagcaagaaaaaattccaaagagaaggtcagcgcaagagacatctcgcttctt
gcaggagaaggagatattacaaggaagttagtcgaacctataaaggttttctctgagaag
gacctactaagggagataggaaaagtagtatctactttgcagccagataatgagtggtca
atccggataactgcaatgcaaagagtggagggtttagtgcttggaggtgctgcggactat
tcggccttccccatgctcctaaaacagctcatgactcctctaataactcagcttctggat
aggagatctagcgttgtaaaacaggcatgccatttattaaacttcctatcaaaagagcta
ctacgtgactttgagccatacgcagagctgcttattccggtccttcttaagaatgtcgtg
atcaccatccttgtaattgctgagtctgctgataactgtataaaagagatgttaaggaac
tgcaaggtggctcgtatactaccaaggattattgaatttgcaaagaatgatagaagtgct
gttcttcgtgccaggtgttgtgaatatgcaacactaatgttagagtactgggttgatact
ccagaaatacagagatcagctgacctgtacgaagaccttataaaatgttgtatagcagat
gcaactagtgaggtccgatcaagcgcaagggcatgctacaggatgttctcaaggatttgg
cctgaccgttcgcatcagctgtactcatcttttgaaccacccagacagaaaatgataaat
gatgaagatactgagacacctcaagcgcatcttcctccagttaaaataagtcatcttcaa
cctagttctttcgttccagctgtaatagataaagttgttaaggtcgattctgggatatca
ttttcttccggagaccttcaaacatcagacatactatacctccagtgtgatgatataatc
gcaaaaggcctagatgcgggcaataacgatgacacactgactattggaagttcttttgag
gataagatcacactaagagaactagaaactagagacagagatactgagaaaaatgattca
ggcaacagtacaggtgtcaattcatcggctcgtgaccaaccaactgccactcccattaca
atagaagcaccttcagaaatgtcactggatgatgcaactgttgtaacaattgttcaagac
aaggctgaatgcaagctgaatgttgaaccgataaatcagcaagttcaagcacaagaagat
ccttctgacttgacatgcctgtcacctgcagttaactcgaaaggtgcagggaacttacta
aaggaaaatcctgttgaagtaagctctgatgctggatcaagtggaaaagtaggaactcat
aagaagagtgctgtttctaagaagccacgtggtagttacacccctaacttccggcgacct
ctcttgagtaagcagatgacaaattggttttatgccagtaccaaaagtgatatacatgag
aagcaactcattctgggagaaatggtcaacaacatggatgtgccctcatctattacagag
gcactttctttgggtcttaacccaagatcagattggatgatgaaggtatatgcattcagt
ttcttaagacagtgtttgctagaacgtggatcaaaaggcactcaggaagttgcacaaaat
tttgagaaggttatgaggcttgtttgtcgatatctagatgatccccatcacaaagtggca
catgctgctctctcttcactagctgatatcatgccagttttcaagaagccttttgaacat
tatctcgacaagacactgccccatattttctcccggttaaatgatccaaaggaatcaatc
aagcagcagtgcttggcaattttgaaacatgcaaatgaaagttatcccattgattctctc
ttacccgccttacttcgttcgctagatgagcagaaatctcccaagtcaaaactggcagtt
cttgagtttgcaaatgcctcttttgtgaaatgcgaagtcaattctgaaagctattgtagc
agcagcttcctcaagccatggtttggaaaacttgcccatttgtttaacgataaaaacaag
aaactgaaggaggttacagtggttggtttctcatctatttattctcactatgatcctaca
tccatgttaagctttttggtcaccctgtcaatggaagaacaaaagcggctaaaacgggca
atgaagcaattaataccatcaatagaaagtgacatggaagagttcttgcaacagaagaga
cataagcaaaagactccatcttttgatatttttactgcaaaatcaccacttcatcctgca
tttcaatctgcaaaatcaccactgcatcctgctcatcgatcttctaaatcaccactccat
cctcgatttgctgagtcgcccggtcattccgcatataaatacgccaagtcaccgctgcat
ccctcgtatcaacctgctaactcaccgctgcatccctcgtatcaatctaactatgtcaag
gctgatgattgtttcagttctgcactccagtgtctcccggatacatctttggaagtccag
gaggaccgtactggaaggattgagatcgaatctcctaataaatcttatgggcacaaagct
gaaatgatggacaagaagtcctgtaccgtgaggtcaaagaatgatctcccgagaagaagt
gacttcagtgtgatatcaaataacatagttcagaatgcaagcagtagggacagtcggagt
acaaagatacttgatgaaccaaacgacagtgaactgcacataaatacccgaaaaaacaaa
gttacgaggacgaggaatgatttgcaggatcatgagaatttacaccagatgtcttcttcc
cttctcgagatgcttgatgacccagatatggccacaagagagcttgcactttctctgctg
gctgaaatccttgaaaagcaccagaaggcgatggagaactgcgttgagcttcttgtagtt
aaactgctgcatgcaaccaaagacggtgccttgaaggtaatgcacagttgcagtgcttgg
ttcggctcgcatttgctggtgcaaccacaaagctggcatctgaagcctttatttatgtca
ctgtcgctgcaggttgtaaatcaggcccatatctgcttgacaactgtggtcactcagttc
gacccactcagatgccttggggccatcgcttctcagctggccagccaggatgagaaagtt
cttattgtaagcatcaatagtctgagcaagcttgtgatgcgattctcggaggacaacctg
atggctcatctgccaacgtttcttccagcacttgtggatgcttccaaaaaccgcagtccg
tatgtccgcaaggctgcgatggtgtgcgtggtggacgcgtacctgaagctggggccggcg
ctgctgccgtacctggagggcctggacagcgcgcagctgcagctgataaccacccacgcc
agccgtctgtcccaggcaagattgattgcgtcggacggctga
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