Zea mays (maize): 103629312
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Entry
103629312 CDS
T01088
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103629312
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103629312
REST complex
103629312
Heterochromatin formation proteins
Other heterochromatin formation proteins
103629312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
103629312
NCBI-ProteinID:
XP_008648696
UniProt:
A0A804PUV5
LinkDB
All DBs
Position
6:54275751..54288647
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AA seq
1266 aa
AA seq
DB search
MARRPPPSPPPPAQGNGSGSGSLTTRDALAYLKAVKDKFQEKRHTYEQFIQVMRDFKSDR
LDSTGVIARVKTIFHGYPDLILGFNAFLPKEHAIRPLDLREDKKPVDYPRAISLVNRIKS
RFQQEEHVYKSFLGILNKYRMHNKPIQDVYNEVTALLHGHPDLLEEFSHFLPDTPMPPPQ
AGTTTKVRHDDNNAIMHSVTRAQTVQVNQQIIESPVFNSKSQTVQRGRDFPSTADWDTSA
DRLDLEHDIQKSCIEKEKIRDACPRQHRRGYKRNEKNDEYENEDLDVEQCGHKSQRKMEG
TGDDTPGDATLSSFNCSHAQEFQFCEKLKAHLEPEAYQEFLKCLHIYNQDIITRNELKRL
VKDILQHYPDLVNGFNDFLGHCENIDGFLEGTFNKIFWNIGQTSRMVRPVEKERYKENEG
DSDPEKERYKESKNSERVLTFNSKEGAAHEASTFPSKEKYNLCKPISELDLSNCQRCTPS
YRLLPKNYPVPSASNRTDTEASVLNDRWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDMF
ELDMLLESVTVAIERVEKLVERMEGNSLKPDSSISLDEHLTSLNMRCIERLYGDHGLDVI
DVLRKNVGVTLPVILTRLKQKQEEWSRCQSDFNKVWAEVYSKNYHKSLDHRSFYFKQQDT
KNLNTKALLSQIKEISEKNRKGDDVLLAIAAGNRWPLVANMSFVYLDMDIHEDLYQIIKY
SCGELCNSSDQVNKVMRIWTTFLEPLLGIHHRAHGAEDADMVKSKRRTREVGLACGGKTN
NAAAKGGNGSKSAGAESVAEFMGRNETIPSMKSIKHDRITSLYGVGVHPFSAYSVSHNNL
RPETEEGELSPNGDFKEEHFCVFEDEAVDGTSKQNEGSTSRSPQGRPKNYLKFSGKDHSG
AENEGNKRAQRSAEDSENASEADEDISGSESAGDEESSHEDQEEEEDDMDLDTKAKNDCR
AEVNREAQGLDGGTSLSFSECLQSTVKPISKYVSTALPNHEKKLSHIFYGNDSFYVLFRL
HQIFYERILSAKTNCSTSDNNWKASRHINSPDQYSRFISALYNLLDGSSDHTKFEDDCRS
IIGTQSYVLFTIDKLIYKIVKQLQALASDEMDNQLLQLYLYEKSRSPGSFFDLVYHENAR
ALLHDDNIYRFECHSDPTELTIQLMEYGNEKPELTAVSFDPTFSPYLYNGYLSSIDDTKL
VDDVFLRRNKRKQGRNDDSPTSLKIMDNVMFANGLECKISCESSKVSYVLDTEDVLFRTR
KRRSSI
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcccgccgccgtcaccccctcccccggcgcaagggaacgggagtgggagc
gggagcctcaccaccagagacgccctcgcctatctcaaggccgtcaaggacaagttccag
gaaaagcgccacacgtacgagcagttcatccaggtcatgcgtgatttcaagagcgacagg
ctcgacagcaccggcgtgatcgcccgtgtcaagaccatcttccacggctacccggaccta
atcctcggattcaacgccttcctgcccaaggagcatgccatcaggcctctggacctccgc
gaggacaagaagcccgtcgattatcccagggccatcagccttgtcaacaggattaagagc
cgattccagcaggaggaacatgtctacaagtcattcctggggatcctcaataagtaccgc
atgcataacaagcccatccaagatgtttacaacgaggtcaccgcactgttacatggccat
ccagatttactcgaggagttcagtcattttttgcctgatacgcccatgcctcctccgcag
gcaggcactactactaaagttaggcatgatgacaataatgctataatgcattctgtcacg
agagctcagacagtccaggtgaatcaacaaattatagaatcacccgtgttcaattccaaa
tctcagacagtccagagggggagagattttccatcaactgctgattgggacaccagtgct
gatcgccttgatcttgagcatgatattcaaaaaagttgtattgagaaggagaaaattcgt
gatgcctgcccacgtcagcatagaagaggttataaaaggaatgagaagaatgacgagtat
gaaaatgaagatttggatgtggagcaatgcggtcacaaatcacaaagaaagatggagggt
actggtgatgatacaccaggggatgctacattgtcctcattcaattgttcacacgcacaa
gagtttcaattttgtgagaaactaaaggcacatctagagcctgaagcttaccaagagttc
ttgaaatgccttcacatatacaaccaagatattattacaagaaatgaactaaaaagattg
gtaaaggatatacttcaacattacccagatcttgtgaatggattcaatgacttcttgggt
cactgtgaaaatatagatggttttttggaaggaaccttcaataaaatcttttggaatata
gggcaaacatcgcggatggttagacctgtggaaaaagagagatacaaggagaacgagggg
gatagcgatcctgagaaagagagatacaaggaaagcaaaaattctgaaagagtattgacc
ttcaattctaaggaaggagcagctcatgaagctagtacattccctagcaaagagaagtat
aacttatgcaaaccaatatcagagcttgatctatcaaattgtcagcggtgcactccaagt
taccgacttttgcctaaaaattatccagtaccttctgcaagcaacaggactgacactgaa
gcttccgtgctgaatgatcgctgggtatcggtgacctcaggaagtgaagattattcattt
aagcatatgcgcaaaaatcagtatgaagaaagcttgtttagatgtgaagatgacatgttt
gagctggacatgctgttggaatctgttactgttgcaattgagcgtgttgagaagttggtg
gaaaggatggaaggcaattcactgaaaccagacagctctatctccctcgatgaacatttg
actagtttgaatatgaggtgcattgagcggctatatggtgaccatggacttgatgttatt
gatgttcttcgaaaaaatgttggtgtgacattaccagttattttaaccaggcttaaacaa
aagcaggaggagtggtcaaggtgccagtcagattttaataaagtttgggctgaggtatat
tcaaaaaattatcacaagtctcttgaccatcgcagtttttatttcaaacaacaagacaca
aagaatttgaacacaaaagctctattatctcagattaaagaaatcagtgagaagaatagg
aagggggatgatgtgttacttgctattgctgctgggaataggtggccactagttgccaac
atgtcatttgtgtatttggatatggacattcatgaagatctttatcagatcatcaaatac
tcttgcggagaactatgcaattcttcagatcaagttaacaaagtgatgaggatctggaca
acatttttagagcctctgttagggattcatcatagggctcatggcgctgaagatgcagat
atggtaaaatcaaagaggcgaactagagaagttggtttggcatgtggcgggaaaacaaat
aatgctgcagcaaagggtggtaatggctctaaaagtgctggagctgagtctgtggctgaa
tttatgggtaggaatgaaacaattccgtctatgaagagcataaaacatgacaggataaca
tctttgtatggagtgggtgtacatccatttagtgcatattcggtgtcccacaacaattta
aggcctgaaacagaagagggtgaattatctcctaatggtgatttcaaagaggaacacttc
tgtgttttcgaagatgaagctgtagatggaacttctaaacaaaatgaaggttctaccagc
agatctccccagggtagacctaagaattatctcaagttttcaggcaaggatcattcaggt
gcagaaaatgaaggtaacaagagagcccagaggtctgcagaggatagtgaaaatgcatct
gaggctgatgaagatatctctggcagtgaatctgctggtgatgaggagtcttctcatgaa
gatcaggaggaagaagaggatgatatggatcttgatacaaaggcaaaaaatgactgcaga
gcagaggtaaatagggaggcacagggtttggatggaggaacatcattgtcattttcagaa
tgtttgcaaagtacagttaaaccaatttccaagtatgtttccactgcattaccaaaccat
gaaaagaaactttctcacatattttatggaaatgactcattttatgttctgttcaggcta
catcagatcttttatgagagaatattgtcagctaagacaaactgttccacatcagacaat
aactggaaagcttcaaggcacataaattctccagatcaatattcaaggtttatcagtgca
ctatacaacttgcttgatggttcttctgaccacaccaaatttgaagatgactgccgctcc
atcattgggactcagtcatatgttctctttactatagataaactgatatacaaaattgtg
aagcagcttcaagcattagcatctgatgaaatggacaaccagcttctccagctttattta
tatgaaaagtcgaggtctcctgggagcttctttgatctggtttatcacgaaaatgcacga
gcccttctacatgatgacaacatataccgttttgaatgtcattctgatcctacagaatta
actattcagctcatggagtatgggaatgaaaaacctgagttgactgctgtctcatttgat
ccaaccttttcaccgtatctttataatggttatctgtcaagtattgatgataccaaattg
gttgatgacgtcttccttaggaggaataagcggaagcaagggaggaatgatgactcccct
acttccttgaagatcatggacaatgtcatgtttgctaatggtcttgaatgcaagatatct
tgcgaatcttcaaaagtctcttatgtcctcgatactgaggatgtcttatttcgtacgaga
aagaggagaagctctatctag
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