Zea mays (maize): 103630545
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Entry
103630545 CDS
T01088
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103630545
03036 Chromosome and associated proteins [BR:
zma03036
]
103630545
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103630545
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
103630545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
SH2
Tex_central_region
HHH_9
Tex_N
MRP-S34
Motif
Other DBs
NCBI-GeneID:
103630545
NCBI-ProteinID:
XP_008649817
UniProt:
A0A1D6M795
LinkDB
All DBs
Position
6:167432747..167447630
Genome browser
AA seq
1622 aa
AA seq
DB search
MGRTVLSDEEEDEFEADEEDPRPSRRNRDDMDERDDDDDDDEDGQDEFEKDDFIVDDEEE
EVEGEEEEQKSDDERRRKKKKKKRESDDFMLDEDDYMLLQDNNITGISRPKPGNKFKRLK
KAGRESEMDEHSGFSDGDGTGKKRSGKERVEYSLFGDHQDAAPFEEDFEDDQQAGEGEEE
VGDDEDEMADFIVEEDEIDGNGQVVRRKKFKKKVPRQAAGVSSSALQEAQDIFGDVDELL
ALRKQELEREALNSGELRGARLEDEFEPFILAEKYMTSKDEQIKENDVPERMQLSEELTG
YPPTDKTTIEEESSWIHSHLTGDGFLSFFGNEHINKDIDQKDIVNVVTMLHANKFEIPFI
AMYRKESCPTLLSFDSDEDNEDIESDARKLRWHKLLWAVQALDRKWLLLQKRKVALQLYY
EKRFDDEKRRIDDVTRQELNSQLYNSIIEALKDAKSEKEVEDVDAKFNLHFPPGEVEEEG
QFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHLTLTKIPEAGELESGRHSPEEVAA
NFTCAMFETSQDVLRGARHMAAVEIGCEPIVRKHVRGIFMNKAVVSTSPTSEGNTIIDPY
HQLSGVKWLREKPLSKFVDAQWLLIQKAEEEKLLKVTVKLPEDAKKKLMSEARENYLSDC
VSKSAQLWDEQRKMILDDAFFNFLLPSMEKEARSLLMTKAKHWLHMEYGKQLWNKVTVAP
WKKKDADKKDADIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAGSISNRSQ
GVAEQQRKKNDQQRVLKFMTDHQPHVVCVGASNYNCRQLKDDLYEVIFKIVEDHPRDVNA
QMENFSIVYGDESVPRLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMIATLCGPGK
EILSWKLHALEQFLTPDEKYEIVEQVMVDATNQIGFDVNLAASHEWHFSTLQFIAGLGPR
KASALQKDLVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQLIDLLEDTRI
HPESYVLAKNLAKDVYVEDAQHEINEMDDEEQEMAIEHVRERPSMLRSLKIVEYIKSITE
EYRKLETLRDIKFELLCGFSDWRIPYTEPSPDEEFWLLSGETDDTISEGRIVQVTVRNIQ
DNKIICTFDSGLKAIVMADNYSDEGFDPESSQLREGDVLTGKIRNVNKNRFMVYLTCKAS
EMRRRPFSRGEQDPYYHEQDMTSQTVEDKARKQKELAKKHFKPRMIVHPHFQNLTAEEAM
QFLSDKEHGEKLIRPSSRGPSFLTLTLKIFDGVYAHKEIAESGKDHKDITSLLRLGKTLT
IDNETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKNEVDEMLRAEKAENPMRIVYSF
GISHEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRKRDFDNIDRLVSYFQKNIDKPPPDA
GPSMRNVAAMVPMKNSAWGSGGGGDANGGWRGDGSNDRDRPFSGRSGGRFDSRNSSGGRG
RGRGRGRGNFGDDDNAGGGWSGGGGGGNSGRWTDNIGTGGSGGSSWGGGGGGDDSNRGGG
GGGWGSAGGGADNAGGGNGAWGAAAGGSDDPGLGSAKKVVPAQDGGTGWGSEGGGGGGGG
GW
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcacggttctttcagatgaagaagaagatgagttcgaggctgacgaggaggat
ccgcggccctcgcggaggaacagggacgatatggacgagcgcgatgacgacgacgacgac
gatgaggacggtcaggatgaatttgagaaggatgacttcatagtggacgacgaggaagaa
gaagtggaaggagaggaagaggaacagaagagtgatgacgagaggcgaagaaagaaaaag
aaaaagaagagggaatcagacgacttcatgctcgatgaggatgactatatgttgctccag
gataataacatcactggcatcagtcgcccaaagcctggaaacaagtttaagcgcttgaaa
aaggctggaagggaatctgaaatggatgagcactctggtttttcagatggtgatggaaca
ggcaaaaaacgcagtggcaaggagagggtcgagtacagtttatttggtgatcatcaagat
gctgcaccctttgaggaggacttcgaggacgatcagcaggcaggggagggtgaggaggaa
gttggtgatgatgaagatgaaatggcagatttcattgtggaggaagatgaaattgatggg
aatggacaagttgtaaggaggaagaaatttaaaaagaaggtaccacgacaagcagcaggt
gtatcatcgtctgctctgcaagaggcccaagacatatttggcgatgttgatgagctgttg
gcactaagaaaacaagagcttgagagggaggcccttaactctggtgagttaaggggggcg
aggcttgaagatgagtttgaaccatttattcttgcagagaagtatatgacatcaaaagat
gagcaaataaaagaaaatgatgttcctgagaggatgcagttgtctgaagagttgactggg
tatcctccaacggataaaacaacgattgaggaagagagttcatggatacacagccactta
accggtgatggatttctgtccttttttggcaatgagcacataaacaaggatattgaccag
aaggacattgtcaatgtcgtgaccatgttgcatgccaacaaatttgaaattccgttcatc
gcaatgtacagaaaagagagctgtccaaccctattaagttttgattctgatgaggataac
gaggatattgaatctgatgcacgcaaattgaggtggcataagctgctctgggcggttcag
gccttagacagaaagtggctacttcttcagaagcgcaaggttgctttacagttgtattat
gagaaaagatttgatgatgagaaacggaggatagatgatgtcacaaggcaagaacttaat
agccaactttataattccatcattgaagcactgaaggatgctaaatctgagaaagaggtg
gaggatgttgatgcaaaattcaatttacattttcctcctggtgaagtagaagaagaaggt
caatttaaacgtcctaaaaggaagtccttgtacagtatctgtcacaaggcagggctatgg
gaggttgccaaccaatttgggcgcagtgctgagcaattaggccaccatctgactttaact
aagatacctgaagcaggcgagcttgagagcggtagacattcacctgaagaggtcgctgca
aatttcacatgtgcaatgtttgaaacatcacaagatgttcttcgtggcgcgagacacatg
gcagcagttgagataggttgtgagccaattgtgagaaagcatgtacgaggcatcttcatg
aataaagcagttgtgtcaacaagtcccacatctgagggaaatacaatcatagatccatat
caccaactatcgggtgttaagtggctgagagagaaaccacttagcaagtttgttgatgca
cagtggctccttattcagaaagcagaggaagaaaagctcctcaaggttaccgtaaaattg
ccagaagatgcaaagaaaaaactcatgtctgaagcacgtgagaattatctaagtgattgt
gtcagcaagtctgcacaattgtgggatgagcaacggaagatgatactggatgatgctttc
ttcaattttctccttccatcaatggaaaaggaagctcgatcactgttgatgacaaaagcc
aaacattggctccatatggaatatgggaaacagttgtggaacaaggttactgttgctcct
tggaagaagaaagatgcggacaagaaggatgctgacattgatttggatgatgaatcagag
ttgagagttatggcttgctgctggggtcctgggaagccagcaaccacctttgtaatgtta
gactcctcaggagagttggttgatgttctgtatgcaggctctatcagtaacaggtctcaa
ggtgtcgctgagcagcagcggaagaagaacgaccagcagcgagtcttaaagtttatgact
gatcatcaaccacatgttgtgtgtgtaggagcatcgaactacaattgcagacaactgaag
gatgatctttatgaggttatttttaaaattgtagaggatcatccaagggatgttaacgcc
caaatggaaaattttagcattgtctatggtgacgagtctgtgcctcgcttgtatgagaac
tctcgaatatcttcggatcaacttcctggccaatcaggtattgtgaagcgggctgtggcg
cttggacgttaccttcagaacccgttggcaatgattgcaacactgtgtggacctgggaaa
gagatactttcttggaaactgcatgctctggaacagtttctaactcctgatgagaagtat
gaaattgttgagcaagtaatggttgatgcaacaaatcagataggttttgatgtcaatctt
gctgctagccatgagtggcatttttctactctacaatttattgctggtttgggtccgcgt
aaagcttcagctttgcagaaagatctggtaagagagggatccatttttagtcgcaaagag
cttgtaaaacctctaggcaggaaagtattcatgaatgcttctggatttttacgtgttcgg
cggagtggtgcagctgcagccagcgctcaactcattgatctgcttgaggatacaaggatc
catcctgaatcatatgtattggcaaaaaatttagctaaggatgtctatgttgaggatgca
caacatgaaataaatgaaatggacgatgaggagcaagagatggctattgagcatgttaga
gaaaggccaagcatgcttcgaagtcttaaaattgtggaatatataaagagcattacagaa
gaataccgtaaactggaaactctgcgtgatataaagtttgagctgctgtgcggtttttct
gactggaggattccctataccgagccaagcccagacgaggaattctggttgctttctggt
gaaactgatgataccatatctgagggaaggattgttcaagttactgttcgcaatatacaa
gataacaaaataatttgcacctttgattcgggtttgaaagccatagttatggcagacaac
tattctgatgagggttttgatccagaatcatcacagttacgtgaaggcgatgtattaact
ggcaaaattcgaaacgtgaataaaaatagattcatggtttacctaacatgcaaggctagc
gagatgaggagaaggccattctctagaggtgagcaggatccttactatcatgaacaagac
atgacctcacaaactgtagaagataaggctcggaaacaaaaggaacttgcaaagaagcat
ttcaagccccgaatgattgttcatccccactttcagaacctgacagctgaagaagccatg
cagtttttatcagataaagagcatggtgagaagttaatccgaccaagctccaggggacca
tcatttttgacacttaccctgaaaatttttgatggcgtttacgcacataaggagatagct
gaaagtggaaaggatcataaagatatcacaagtttgcttcgcctggggaaaacactaaca
attgataatgaaacttttgaagacctcgatgaggttattgaccgatatgtggacccattg
gtaggacacctgaagagcatgctgtcgtaccgtaaattcagaaagggtttaaaaaatgag
gttgatgagatgttaagggcagagaaagcagagaaccctatgagaatagtatatagtttt
ggcatatctcacgaacatcctggcacctttatattgtcatatattaggagtacaaaccca
catcacgagtacattgggttgtacccgaagggcttcaggttcaggaagagagacttcgac
aacattgaccgtcttgtgtcgtatttccagaagaatattgacaaaccaccacctgatgct
ggaccatcaatgcggaatgttgctgcaatggtacctatgaaaaactcagcttggggttct
ggtggtggtggggatgcaaatggtggttggaggggagatggtagtaatgatagggatcga
cctttctctggcagatcaggagggaggtttgattcaaggaatagctctggtggtcgtgga
cgaggacgggggcgtggccggggtaactttggcgatgacgataatgctggtggaggttgg
agtggaggaggtggtggtggcaacagtggaaggtggaccgataacattggcacaggtggc
agtggtggttcttcctggggtggtggtggcggtggtgatgacagcaaccgtggcggtgga
ggagggggttggggatcagctggtggtggtgctgacaatgctggtggcggaaatggagcc
tggggagcagctgctggtggctctgatgacccagggttgggtagcgccaaaaaggtcgtc
ccagcacaggatggtggaaccggctgggggtcagaaggtggcggcggcggtggtggcgga
ggctggtaa
DBGET
integrated database retrieval system
