Zea mays (maize): 103630583
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Entry
103630583 CDS
T01088
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
zma
Zea mays (maize)
Pathway
zma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103630583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103630583
04121 Ubiquitin system [BR:
zma04121
]
103630583
03036 Chromosome and associated proteins [BR:
zma03036
]
103630583
03400 DNA repair and recombination proteins [BR:
zma03400
]
103630583
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103630583
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103630583
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103630583
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103630583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_6
PHD_NSD
zf-HC5HC2H_2
PTCB-BRCT
Nucleocap_ssRNA
Motif
Other DBs
NCBI-GeneID:
103630583
NCBI-ProteinID:
XP_008649851
UniProt:
A0A804Q0Y9
LinkDB
All DBs
Position
6:169580649..169586240
Genome browser
AA seq
961 aa
AA seq
DB search
MADVGSLERMGRELKCPICLSLLTSAVSITCNHIFCNACLTESKKSASCCPVCKVPFHRR
EIRPAPHMDNLVAVFKSMEAAAGISVVSTQLTPAPKAAECSEYTAGKPRRSNKKKLASKK
EKNTVKATANSASCSTAKPSISKNKRIHVTPFPESETPIRPKKIMKSDEQKRKEDKDNTL
NSDIPDNPSLSPFFWLKEQEENVGGTAETLSEPLSLDTALCHNVPTFSDIKDSDDEMPND
MTPNSKVEVSELFDSEIFEWSQRPCSPELRSTPLKKQGQSKNTLDQITEVDDGGYMNLGD
LFDKLDHESNVTQPANAEEAKKRKLARARNRKNSKLPSRVKLCTKGSDAEHQVKNIPVSI
AAKPNQKDINKKKRCTLNGGNKVSGNNTKVVFSSDKYMYTFSPQSGGLDIEAPENQPSER
ILKKPKNSRSKLHIAGDSAVKTAKNKSEQRVKQTIRCSGGVVDENLRVLSEAENEIESFQ
LHRLAKGCTQHKPFDDRSKQNMESNIGPNTPSILPGRCQFDEAIHTIPTVKNVSVKNGRA
KSIEQPDYPGSIRLCTAHNTALKKCEGKASKLSCAFCQSDDTTQESGEMVHYHNGKQVPA
AFDAGAGVVHCHKNCLEWAPDVYFEDDSVFNLANELARSKRIKCACCGIKGAALGCFETS
CRKSFHLTCARLIPECRWDNENFVMLCPLHQSSKLPRETSGFKNKSHRKLARKSSSEVNT
SQSHDNKWTWPSGSPPKWVLCCSALSAAEKGIVSELAKIAGVPISTSWSPNVTHVIASTN
MSGSCKRTLKFLMAILNGKWVISMDWVKTCMELMEPADEMKFEVSTDVHGTADGPRLGRQ
RVINKQPKLFDGIQFYLHGDYTKSYRGYLQDLVVAAGGTVLQRKPVSRNHQKLLDESSLI
LIVYSIENQDKAKPGSSDGMDTGRSQADAQALACASGGKAVSSAWIIDSIAACNLRPSML
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggggagcctcgagaggatgggccgggagctcaagtgccccatctgcttg
agcctgctcacttcggcggtgtccatcacctgcaatcacatcttctgcaacgcctgcctg
acggagtctaagaaatctgcctcctgctgccccgtgtgcaaggttccattccaccggaga
gaaatacggccagcgcctcacatggataatttggtggccgttttcaaaagtatggaagct
gcagcaggtattagtgtcgtgtcaacacagctgactcctgcacccaaagctgcagagtgt
agtgagtacactgctggaaagcctagaaggtcgaataaaaagaagctagcatccaagaaa
gaaaagaatacagtcaaagctactgcaaattctgcatcttgttctactgcaaagccttca
atctccaagaacaaaagaatacacgtgacaccattccctgaatctgagacgccgataagg
cccaagaagattatgaagtctgacgagcaaaaacgtaaagaggataaagataacacactg
aattctgatataccagataacccttcattgtcaccttttttctggctgaaggaacaagaa
gaaaacgtaggtggcactgctgaaactttgagtgaaccactatcattggacacagccttg
tgtcacaatgtgcctaccttcagtgatatcaaagattctgatgatgaaatgcctaatgat
atgactcctaatagcaaagttgaggtttcagaattattcgacagtgaaatctttgaatgg
agccaaagaccttgctcccccgagctgcgttctaccccactgaaaaaacagggtcaatcg
aagaatactctagatcaaatcacagaggtggatgatggaggatatatgaatcttggtgat
ttatttgataagttagaccatgaaagtaatgtaactcaacctgccaatgctgaagaagct
aagaagagaaagttggcaagagctaggaacagaaaaaactcaaaactgcccagtcgtgtt
aaactatgtacaaaaggatctgatgctgagcaccaagttaaaaatatccctgtaagtatt
gctgcaaagccaaaccagaaggacatcaataaaaaaaagagatgtactttgaatggagga
aacaaggtctctggcaacaacactaaagttgtcttctctagtgataaatatatgtataca
ttttcccctcaatcaggcgggttggacattgaagcacctgagaaccagccttcagaaagg
atcctcaaaaagcctaaaaacagtcgaagcaaacttcacatagcaggggatagtgcagtg
aagaccgcaaagaataaatctgaacaaagagtaaagcaaaccataagatgttctgggggt
gttgtagatgaaaatctaagagttctttctgaggctgaaaatgaaatagaatcgtttcag
cttcacagactcgcaaaaggttgcacccaacataaacccttcgatgatagaagtaaacaa
aacatggaatcaaacattggtccaaatacaccaagcattttacctgggaggtgccaattt
gatgaggccatacacacaattcctacagtgaagaatgtctctgttaagaacggtagggca
aaatcaattgaacaaccagattacccaggatctatcagattatgcactgcacacaatact
gccctgaagaaatgtgagggtaaagcttctaagctttcctgtgctttctgccagtctgat
gataccacacaggaatctggagagatggttcactaccataatggaaagcaagtgccagca
gcatttgatgcaggggctggtgtagtacattgccacaaaaactgcctggagtgggctcct
gatgtctactttgaagatgactctgtctttaatcttgcaaatgagttggctagaagtaaa
agaatcaaatgtgcttgctgtggaattaaaggtgctgcacttggatgctttgagacgagt
tgccgaaaaagcttccatctcacctgtgctagattaatcccagagtgcagatgggataat
gaaaactttgtgatgctatgccctttgcaccaatcttcaaagttgcccagagaaacttct
gggtttaaaaataagtcgcacaggaaactagcacgaaaaagttcatctgaagtaaacact
agtcaaagccatgataataagtggacatggccatctggatcaccaccgaaatgggttcta
tgctgttcagccctttctgccgcagaaaagggtatcgtatcagaactcgcaaaaatagct
ggtgtgccaatctcaacaagttggagtcctaatgttacccatgttattgcatcaaccaac
atgtctggttcttgcaagcgcacactgaagtttctgatggcaatcttgaatggcaaatgg
gttatctccatggactgggttaaaacttgcatggaacttatggaacctgctgatgaaatg
aaatttgaagtttccactgatgtacatgggactgctgacggtcccaggttaggtagacaa
cgagttatcaacaagcaacctaaattattcgatggcattcaattctatctccatggagac
tataccaagtcgtacagaggctacctgcaagaccttgtggttgcagccggtggaactgtc
ttgcagaggaagcccgtgtcaagaaaccatcagaagttgcttgacgagagctccctcatc
ctcatcgtatacagcatcgagaatcaggacaaggcaaaaccaggatcaagcgatggcatg
gatactggtcgtagccaagctgatgctcaggctctggcctgtgcctctggtggcaaagct
gtgagcagcgcatggatcatcgactctatagcggcttgcaaccttcgaccttccatgcta
ccctag
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