KEGG   Zea mays (maize): 103630828
Entry
103630828         CDS       T01088                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
zma  Zea mays (maize)
Pathway
zma03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103630828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    103630828
   03036 Chromosome and associated proteins [BR:zma03036]
    103630828
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103630828
   Coactivators
    SAGA/TFTC/STAGA complex
     103630828
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103630828
    STAGA complex
     103630828
    TFTC complex
     103630828
    SAGA complex
     103630828
    SLIK complex
     103630828
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_IP5PC_F Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_ACSF4 Cytochrom_D1
Other DBs
NCBI-GeneID: 103630828
NCBI-ProteinID: XP_020395278
LinkDB
Position
6:complement(5761174..5765507)
AA seq 454 aa
MGTQYTFHYPKLFTAPSRADPPSFLQSPRSAGAPSSLPFLPAIGTQAAAAALRLGLYDCV
SGFPSGLRPPASHHAPSPPVLCTPAGDPACLPFSLLPPPVDRQRLVICHKFSHYIFLQKR
NTEGGKQNASLKKAKKDKLVGATGKNVRTETSMVFVTLRVKPELTLPATPIEVEQSILED
LRNRAQLNNVALPSVSFYTFLNTHNGLNCSSISHDGSLVVGGFSDSSVKVWDMSKIGQPA
KISSSQNENGCSHGEHISTLDEGKRTYTLFQGHSGPVYSAAFSPFGDFLLSSSSDLTIRL
WSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSIDKIQPLRIMAGHLSD
VDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDE
DGTIMIWDLSTGRCVSPLLGHSSCVRTLAFRFAI
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgggcacccaatacacgtttcattaccctaaacttttcactgctccatcgagggcagac
ccgccgtcgtttcttcaatctcctcgcagcgccggcgctccatcttcgctccctttttta
cccgcgatcggcacgcaggcggcggctgcggcgctcaggctcgggctctacgactgcgtc
agcggcttcccctccggcctccggcctcccgccagtcaccacgcgccctcgcccccggtc
ctctgcacaccggccggtgaccctgcgtgcttgcctttctctctcctcccgcctccggtg
gatcgtcaaaggctcgttatctgtcataagttttctcattatatttttctacagaaaaga
aacacagaaggtggaaagcaaaatgcttctcttaagaaggccaaaaaggacaagcttgta
ggtgcaactggaaaaaacgtcagaactgaaacaagcatggtttttgtgacacttcgagtg
aaaccagagctaactcttccagcaacacctattgaagttgaacaatcgattctcgaggac
ctgcgaaaccgtgcacaactaaataacgtggcattgccatctgttagcttctacacattc
cttaatacacataatggattaaactgttcgtcaatatcacatgacggatcgctggttgtt
ggtgggttttctgattcatctgtgaaggtctgggatatgtcaaagattggccaaccagca
aaaatatcaagttcacaaaacgagaatgggtgttcccatggtgagcacatatcaacatta
gatgaggggaaaagaacctatacactatttcaaggccattctgggccagtttattctgcg
gcttttagcccttttggggatttcctcttgtcatcatcttcagatttgacaataagacta
tggagcaccaagctgaatgccaatcttgtctgttacaaaggacataattacccagtttgg
gatgtccaattcagcccagttggccattactttgctagtgcttcacatgacaggactgct
agaatttggtcaattgataaaatccagcctttgcgaataatggctgggcatctttctgat
gttgattgtgtccagtggcacgtaaactgtaactacattgctaccggctctagcgacaaa
actgtaagactatgggatgttcagacgggtgaatgtatacggatgtttattggtcatagg
agtatggttttgtcactggcaatgtcacctgatggacgatacatggcctctggagatgaa
gatggaacaatcatgatatgggatctctcgactggccgttgtgtttcaccactgctagga
cacagctcttgtgtgcggacacttgctttcaggtttgcaatctaa

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