Zea mays (maize): 103631311
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Entry
103631311 CDS
T01088
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zma
Zea mays (maize)
Pathway
zma00040
Pentose and glucuronate interconversions
zma01100
Metabolic pathways
Module
zma_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103631311
Enzymes [BR:
zma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103631311
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
103631311
NCBI-ProteinID:
XP_020395651
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Position
6:115969229..115976973
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AA seq
399 aa
AA seq
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MALSSNAMRVVFLLAMMACAAHAGKPAPKECWIFYEFEEGEGEEGDKKSGDAAAPEGAEE
GSGSSDISKLGAKGDGKTDSTKALNDAWEAACGKEGKQTLMIPKGDYLAGPLNFSGPCXV
DNLVITGKGTLDGQGKEVWDNNKCAKKYDCKILPNSLVLDFVNNGTVSGITLLNAKFFHM
NVFQCKDMTIKDVTITAPEDSPNTDGIHIGDSSEVTISGTTIGTGDDCISIGPGSSGINI
TGVTCGPGVGSLGRYKDEKDVTDVNVKDCTLKKTSNGVRIKAYEDAASVLTASKLHYENI
AMEDVANPVIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPSAVSLLCSDKIPCS
DITMDKVKVEYKGTNNKTMAVCNNAKGSATSCLKELACL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagcagcaatgctatgcgggtggtcttcctcctcgcgatgatggcgtgcgcc
gcccatgcggggaagccagccccaaaggagtgttggatcttttatgagtttgaagaagga
gaaggagaagaaggcgataagaagtcaggcgatgccgccgcgccggagggcgccgaggag
ggcagcgggtcttccgacatatccaagctgggagccaagggcgacggcaagacggacagc
accaaagcgctgaatgatgcgtgggaggcggcgtgcggcaaggaagggaagcagacgctc
atgatccccaagggcgactaccttgctggtcccctcaacttctccgggccgtgcnacgtt
gacaacctcgtcatcaccggcaagggcaccctcgacggccagggcaaagaagtgtgggac
aacaacaaatgtgccaaaaaatacgactgcaagatcctgcccaactcgctggtgctggac
ttcgtgaacaacggcaccgtctccgggatcaccctgctgaacgccaagttcttccacatg
aacgtgttccagtgcaaagacatgacgatcaaggacgtgaccatcaccgcgccggaggac
agccccaacaccgacggcatccacatcggcgactcctccgaggtcacaatctccggcacc
accatcggcacgggtgacgactgcatctccatcggccccggcagcagcgggatcaacatc
accggcgtcacctgcggccccggcgtcggcagcctgggcaggtacaaggacgagaaggac
gtgacggacgtcaacgtcaaggactgcacgctcaagaagaccagcaacggcgtccggatc
aaggcctacgaggacgccgccagcgtgctcaccgcctccaagctccactacgagaacata
gccatggaggacgtggccaaccccgtcatcatcgacatgaagtactgccccaacaagatc
tgcaccgccaagggcgattccaaggtcaccgtcaaggacgtcaccttcaaaaacatcacc
ggcacctcgtccaccccctccgctgtcagcctgctctgctccgacaagatcccctgcagc
gacatcaccatggacaaagtcaaggtcgagtacaagggaaccaacaacaagactatggcg
gtctgtaacaacgccaagggaagcgccaccagttgcctcaaggaactggcatgcctctga
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