| Entry |
|
|---|
| Name |
(RefSeq) putative transcription elongation factor SPT5 homolog 1
|
|---|
| KO |
| K15172 | transcription elongation factor SPT5 |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:zma00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103631336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:zma03021]
103631336
03019 Messenger RNA biogenesis [BR:zma03019]
103631336
Transcription machinery [BR:zma03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103631336
RNA polymerase I system
103631336
Messenger RNA biogenesis [BR:zma03019]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103631336
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
6:complement(120726562..120737327)
|
|---|
| AA seq |
1040 aa
MARRDHDDDDEEEVEEEAYDLDEEEDDEDEEDDYEEEARRGKASRGGGKGGGGRKRSRED
NFIDDSAIEDEDEDDDDDGGGRPRKKGGGGVRGFFDEEAQVDEDEEEEDEGEGEDDFIND
AGADLPDEDVVRGSRRHSIPMRDEEEDIDEIERQVRERYARSTHIEYGEEAAEVEQQALL
PSVKDPKLWMVKCAIGHERETAICLMQKFIDRSDLQIKSVVALDHLKNYIYVEAEKEAHV
KEACKGLRNIYASAKITLVPIKEMADVLSVESKSVDLSRDSWVRMKLGIYKGDLAKVVDV
DNVRQRVDVKLIPRIDLQALASKLEGESVKKKAFVPPPRFFNIDEAREMHIRVERRRDKE
SGEYFEWVDNLKFKDGFLYKSVSTKSIHTNNIQPNFDELEKFKKPGDDMNGDMASLSTLF
ANRKKGHFMKGDAVIVIKGDLKNLEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYF
KPGDHVKVISGVQEGATGMVVKVEGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIG
DYELHDLVLLDNLSFGVIIRVEAEAFQVLKGVPDRPEVVLVKLREIKSKIDRRSSAKDRS
NNIISAKDVIRVVEGACKGKQGPVEHIHKGMLFIYDRHHLEHAGFICAKAQSCLLVGGST
GGHRGNGMDTVDARLGALRSSASILQSPGRLPPRGPNMNYGGRFGGGRGGRCDALVGKCI
KIKSGPYKGYRGRVKEVTGALVRVELDSLMKIVTVKRDDIADTPTVATPFREPRYSLGGE
TPMHPSRTPHHAYQTPMRDPGATPIHEGMRTPMRSRAWAPMSPPRDNWEDGNPATWGSSP
AYQPGTPQARPYEAPTPGSGWANTPGVSFNDAPTPRDNYANAPSPYVPSTPVGQPMTPNS
ASYLPGTPGGQPMTPGNAGMDMMSPIIGGEGEATWLLPDVLVNVLSGGDDGPGVVREVLG
DGSCRVALGSSGNGDMVTVLPNEVEVIRPKKSDKIKILNGSFRGHTGKLIGIDGSDGIVR
LDDTYEVKILDMVILAKLAT |
|---|
| NT seq |
3123 nt +upstreamnt +downstreamnt
atggctcgccgcgaccacgacgacgacgacgaggaagaggtcgaggaggaggcatacgac
ttggacgaggaggaggatgacgaggatgaggaagacgactacgaggaggaggcgaggcgc
gggaaggcctcccgcggcggtggcaagggtggcggcgggcggaagcggtcacgcgaagac
aacttcatcgacgactcggccatcgaggacgaggacgaggacgacgacgacgacggcggg
ggccggccgaggaagaagggcggcggcggggtgcgagggttcttcgacgaggaggcccag
gtcgacgaggatgaggaagaagaggacgaaggcgagggagaggacgattttattaatgat
gctggggccgaccttcctgatgaggatgttgttaggggctcaagacgtcattctattcct
atgagagatgaggaagaggatattgatgagattgagagacaagtgcgggagagatacgca
cgatccactcatattgagtacggtgaggaagctgcagaagtggaacagcaagctctgctg
ccgtccgtgaaggatcccaaactatggatggtcaaatgtgcgattggacatgagagagaa
actgctatttgtctgatgcaaaagttcatcgatcggtcagaccttcagataaagtcagtc
gtggcattggatcatcttaaaaattatatttatgttgaagctgaaaaggaggcccatgtc
aaagaggcttgcaaaggtctaagaaacatttatgcttcagcaaaaataacattagtgccg
ataaaagaaatggcagatgtcctctccgttgagagcaaatctgttgatctttcaagggat
tcttgggttcgaatgaaattgggcatatataaaggcgaccttgctaaggttgttgatgtt
gataatgtacgtcaaagagtagacgtgaagctgatccctagaatagatctacaagctttg
gctagtaaacttgaaggggagtctgtaaagaagaaagcatttgtcccaccaccacgattc
ttcaatatcgatgaggcgagggagatgcatattcgtgtggaacggaggcgagataaagaa
tctggggagtactttgagtgggttgataatttgaagttcaaagatggtttcttgtacaaa
tctgtctccactaaatcgatccacacaaacaatattcaaccgaattttgacgaacttgag
aagtttaagaagcctggtgatgacatgaatggcgacatggctagcttgtccactctgttt
gcaaacaggaaaaaaggacactttatgaagggtgatgccgtcattgttattaaaggcgat
ttgaaaaatctggagggttgggttgagaaagtagaggatgaaaccgttcacatcaggcca
aaaatatctgatctcccgaaaacattggccttcaatgaaaaagagctttgcaaatatttc
aagcctggtgaccatgtcaaggtgatctcaggagttcaagaaggcgctactggcatggtt
gttaaagtggaagggcatgtcttgatcattttgtctgacacaactaaagaacatatccgt
gtgtttgctgatcatgtcgttgaaagctctgaaattaccacaggaatcaccagaatcggt
gattatgaactgcatgatcttgtccttttagacaacttgtcatttggagtaattataagg
gtggaagctgaagcatttcaggttctgaaaggagtgccagatagacctgaagttgtgctc
gtgaaattaagagagataaaaagcaaaattgataggcgctcatcagctaaagatcgttct
aataatattatctctgcaaaagatgtcataagggttgttgaaggagcatgcaaggggaag
caaggacccgtggaacacatacacaaggggatgctgtttatttatgacaggcatcacctt
gaacatgcaggctttatttgtgcaaaagcgcaatcttgccttcttgttggtggatcaacc
ggtggccatcgaggaaatggtatggacacagttgatgcacggcttggtgctttgagatct
tcagcaagcattctgcaatctccaggaaggctgcccccaagaggacctaatatgaattat
ggcggaaggtttggaggcggccgtggtggtaggtgtgatgccttggtgggtaaatgtatc
aaaattaaatctggaccttataaaggatatcgtggccgtgttaaagaggtgactggtgca
ctcgtacgtgtagagcttgattcattgatgaagattgtcacagttaaaagagacgatatt
gctgacacacctactgttgcaacaccattccgtgaacctcgttattcattgggtggtgaa
actccaatgcacccgtctcgaacaccacatcatgcttatcagactccaatgcgggaccct
ggagcaacaccaatacatgaagggatgcggactcccatgcgaagtcgagcctgggctcct
atgagccctccgagggataattgggaagatggaaatcctgctacttggggtagcagtcca
gcttaccagccaggaaccccacaagctcggccatacgaagcccccacacctggatcaggg
tgggcaaacactccaggagttagtttcaatgatgctcctactcccagggataactatgca
aatgccccaagtccatacgtgccttccacgcctgttggccaaccaatgacgccaaactca
gcctcatatcttccaggcacacctggtggtcaaccaatgaccccaggcaatgctggaatg
gatatgatgtcgccgataataggtggtgagggtgaagctacatggctgctgccggatgtt
ttggtcaatgtgttgagcggaggtgatgacggtcctggtgtggttagggaggtactcggg
gatggatcttgccgagttgcacttgggtcttcgggcaacggtgacatggtgacggttctt
ccgaacgaggtcgaggtcatcaggccgaagaagagtgacaagatcaagatactgaatggt
agtttccgtgggcacacaggaaaacttataggtatagatggttctgacggaatagtgagg
cttgacgacacatacgaagttaagatattagatatggtgattttggccaaactggcgact
tga |
|---|
