Zea mays (maize): 103631746
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Entry
103631746 CDS
T01088
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103631746
03036 Chromosome and associated proteins [BR:
zma03036
]
103631746
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103631746
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103631746
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103631746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
UvrD-helicase
ResIII
AAA_22
AAA_16
Terminase_6N
ATPase_2
Mg_chelatase
AAA
AAA_7
SLFN-g3_helicase
Mov-10_helical
Helicase_RecD
AAA_25
Med6
DEAD
AAA_24
Terminase_3
Motif
Other DBs
NCBI-GeneID:
103631746
NCBI-ProteinID:
XP_008651233
UniProt:
A0A1D6JP79
A0A8J8YPS6
LinkDB
All DBs
Position
1:complement(12434131..12438617)
Genome browser
AA seq
967 aa
AA seq
DB search
MGVHRRNYSDDEFSVAGERPEVEFMDFQNDDTFQDYSCEDTPVLVSAPFPFEDGKPKSAL
VGETSADTIQIENTSPESVNLWSVRIFSSNPEDSYVLSMMRPPSDDANEEEKHAFLALTS
VEDRTLLPGQTLTVWLSCTPKDIGLHTSIVHVDIGDEKIERVAFLLADDNVSQALFSDKP
YSRRRDQVKKFGPSPTVPGRRPTKQHVQGFKHRLPQYAIPAHIRELIESKQKPDVLYDEL
SMVNYAEYFSTLLVMEELNLEEEMRTYDMEGVLMRRRGMHFLSLEVPGLAEKRPSLVQGD
FVVARYAGNHAQAYQGFIHRVEADEIFLQFDHQFHMNHHDRNRYHVSFTYNRVNMRRLYK
SIDDAKYLGPGILFPRQSPCRVLKRWPFNPLNPHINTEQADAVAMVLACRGGSPYVIYGP
PGTGKTMTIVEAVLQLYTGKKRANILICAASNTAADHVLEKLLQASYLIRPSDIFRLNAQ
SRQYEDVSTDFIKFCFFQDRVFMCPPLQALVRYRIVISTYSSSYQLQAEGIRQGHFTHIF
LDEAGQASEPEAMVPLSGLCGRDTVVVLAGDPKQLGPVVYCKQAEKDGLGTSYLERLLTD
FEPYGTRNPNYVTKLVRNYRCHPAILELPSELFYEGELIPCKEGESSAYDCIGLPDKSFP
VLFIGIQGCDEREGANPSWFNRIEVSKVVSIIRNLTRGGDVDASDIGVITPYRQQVAKIK
KALEAFEMPGLKVGSVEQFQGQEREVIIISTVRSTVKHNEFDRFFNLGFLSNHKRFNVSI
TRAKSLLVIVGNPYIITKDRHWDRLLRYCADNGSYQGCPLPPPESHAYSDGTRFFSEHDD
GHQAGPSGQDDYYNQEATYCSYNNQEPSDFGFRLGSGAEPASENQELPSEELPEDEKQPL
FSNPQADLEETPKQDVVEEGAAQGGVLADPTSSTTADDQLQGAYAEKYSFPPGWCDVSSI
PAQGWGD
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcaccgtaggaattattcagatgatgaattttcagttgctggcgagaggcca
gaagtagaattcatggacttccagaacgacgacacctttcaggattattcatgtgaagat
acccctgtgcttgtctcagctcctttccctttcgaggatggaaaaccaaaatctgcactt
gtcggagaaacatcagctgataccatacagattgagaatacctctcctgaatctgtaaat
ctgtggagtgtaagaattttctcttcgaacccagaagacagctatgttctatcaatgatg
agaccaccgtcagatgatgctaatgaggaggaaaagcatgcttttcttgctttgacgtcc
gtggaagaccgtacacttctgcctggacaaacccttacagtttggctgtcttgtacgcca
aaagatattggcctgcatacatcaatcgtgcatgttgatatcggtgatgagaagattgag
cgtgtggcttttcttttggcagatgacaatgtctcccaggccttattttctgataagcct
tattccaggagacgtgaccaagttaagaaatttgggccttctccaactgtgccaggtcgt
cgtccaactaagcagcacgttcaaggattcaaacataggcttcctcagtatgcaatacct
gcgcacatccgtgagctcattgaaagtaaacagaaacctgatgtcttatatgatgagttg
agcatggtaaactatgcagaatatttcagcactcttctagtcatggaagagctcaatttg
gaggaggagatgagaacatatgacatggagggtgtcttaatgagaaggaggggtatgcat
tttttgtctcttgaggtccctggtttggcagaaaaaaggccatcactagtccaaggagac
ttcgtagttgctagatatgctgggaatcatgctcaggcttaccaaggtttcattcacagg
gttgaagctgatgagatatttttacaatttgaccatcagtttcacatgaatcatcatgat
agaaaccggtaccatgttagcttcacatataacagagtgaacatgagaaggctttacaag
tcaattgacgatgcaaaatatttgggacctggcattttgtttcctcgccaatcaccttgt
agagttttgaaaaggtggccgtttaatcctctgaatccacatataaatactgagcaagct
gatgctgttgcaatggtacttgcctgcagaggaggttcaccatatgtgatatatggacct
ccaggaactggcaagaccatgaccattgtagaagccgttttgcagctttacacgggaaag
aagagggcaaatattctcatttgtgctgcttccaatactgcagctgatcatgtactggaa
aagctccttcaagctagctatctgatccggccaagtgatatctttaggctaaatgctcag
agtcgccaatacgaggatgtcagtactgattttatcaagttttgcttctttcaagatcgg
gtgttcatgtgccctcccttacaagcattggtgcggtacaggatagtcatatcgacctat
tcgagttcctatcagctgcaggctgagggcattcgccaagggcatttcacacacattttc
ctggatgaggctggccaagcctctgaaccagaggcgatggttcctttgtcggggctgtgt
ggaagagacactgtggttgtgttagcaggagatccaaagcaattaggtccggtggtttac
tgtaagcaagcagagaaggatggtctggggacatcatatctggaaaggctgctgactgac
ttcgagccgtacggaacaaggaatcctaactacgtgacaaaactggtgaggaattaccgc
tgccatcctgcaatcctggagctaccatcagagcttttctatgagggtgaactgattccc
tgtaaagaaggagagtcatctgcttatgattgcataggccttcctgacaagtccttccct
gttcttttcatcggaattcaaggatgcgatgagagggaaggcgccaacccatcatggttc
aacaggatcgaggttagcaaagtggtctctatcatcaggaacctgacaaggggcggggac
gttgatgcatctgatataggagtaatcactccgtaccgccagcaagtcgccaagataaag
aaagccctagaggcattcgaaatgcccggcctgaaggtcgggagcgtcgaacagttccag
ggccaagagagggaggtgataatcatctccacagtccggtcgaccgtaaagcacaacgag
ttcgacaggtttttcaacctggggttcttgagcaaccataaaaggttcaacgtttctatc
acccgcgcgaaatcgttgctcgtcatcgtcggaaacccttacattatcaccaaggaccgt
cactgggataggctcctgcgatactgcgctgacaatggctcttatcaaggatgccccctt
ccaccaccggaatctcatgcttattcagacggtaccagattcttctccgagcatgacgac
gggcatcaagctggaccttctgggcaggacgactactacaaccaagaagccacctactgc
agctacaacaaccaagagccttctgacttcggtttcaggcttggcagtggtgctgaacct
gcttcggagaaccaagagttaccgtccgaggagctgcctgaggacgagaagcagccatta
ttcagcaacccccaagcggatctcgaggagacgccgaagcaggacgtcgtcgaggaaggg
gctgcacagggaggcgtgctggccgacccgacatcgtcgacaaccgccgacgatcagctc
cagggtgcatatgcggagaagtacagcttccctcctggctggtgcgacgtttcgagcatc
ccggcgcaaggctggggcgactga
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