Zea mays (maize): 103631988
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Entry
103631988 CDS
T01088
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103631988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103631988
03016 Transfer RNA biogenesis [BR:
zma03016
]
103631988
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103631988
Messenger RNA biogenesis [BR:
zma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103631988
Transfer RNA biogenesis [BR:
zma03016
]
Prokaryotic type
tRNA degradation factors
103631988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
103631988
NCBI-ProteinID:
XP_008652072
UniProt:
A0A1D6HT50
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All DBs
Position
7:complement(8360702..8376722)
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AA seq
880 aa
AA seq
DB search
MLAAPAALHLLLPAPPLPPPHYHHHHVAFPAPPLHASLPCSRRPRRRPPRHGVARASAAM
AEEASSSGPTKFSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLSDTPNDP
SDFFPLSVHYQERLSAAGRTSGGFFKREGKTKDHEVLVCRLIDRPLRPTMPKGFYFETQI
LSWVFSYDGIHSPDCLAITAAGIAVALSEIPNKQTIAGVRIGLINNQFIVNPTTEQMENS
ELDLMMAGTDSAILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQSCGKKKMVD
AISLPPPELYRHVEDISGDELMKALQIKGKIPRRKALSALEEKVISILSEQGYVSKDGLS
GGTESLADIVEDEDEDEIVDDGEVDEGDVHIKPVSRKPLQLFAEVDVKLVFKEISSKYLR
KRIVERGKRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQRID
NLVDTEDSKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPLEEDFPYTI
RVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPLILS
DITGAEDASGDMDLKIAGNESGISAFQMDIKVVGITLPVMEKALLQAREGRQHILNEMLK
SSPPPSKALSPHAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKIT
ARDLTSLEKSKIIIANLTMVPKVGEIYRDCEIKSIAPYGAFVEIAPGREGLCHISELSSG
WLAKAEDAFKVGDRIDVKLIEINDKGQLRLSSRALLPDVDSESNIGSTKEKVPQKDDVIK
MTTKRPRRKKQPEPSGAENATTKALAKSAAAPAGSKGSEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggcccccgccgcgctccacctcctcctcccggcgccgccgctgccgcccccg
cactaccaccaccaccacgtcgccttccccgcgccgccgctccacgcctcgctcccgtgc
tcacgccgcccgcggaggaggccgcccaggcatggggtcgccagggcctccgccgcaatg
gcggaggaggccagcagctccggaccgaccaagttctccgtgaggatccccgtcggcgac
cgcgagatattggtggaaacgggccacattgggaggcaagcgagcgcttctgtaatggtc
actgatggcgaaacgattctctactgttctgtctgtctgtcggatactccaaacgaccct
tctgactttttccctttatcggttcactatcaagagcgcctttcagctgctggaagaact
agtggcggtttcttcaaacgagaaggcaagacaaaagaccatgaggttttggtttgcaga
ttgatagacaggcccctacgacctactatgcctaagggtttctactttgaaactcagatt
ctatcctgggtcttcagttatgatggcattcactccccagactgcttggctatcacagct
gctggtatagccgtggccctctctgaaattccaaataaacaaacaattgctggagtaaga
attggcctaattaacaaccagtttattgttaacccaactactgaacagatggagaattca
gagttagatttgatgatggctgggactgatagtgccattttgatgattgagggctactgt
gattttctgactgaggagaagctgcttgaagctgtcgaagctgggcaggtggcaattaga
gaaatctgcaaagcaattgatgttcttgttcagagctgtgggaagaagaaaatggtcgat
gctatcagcctaccgccgcctgaactctacaggcatgttgaagatatttctggagatgag
ttgatgaaggcattacaaataaaaggaaagattcccagaagaaaagctctttcagcattg
gaagagaaagttataagtatactttctgagcagggctatgtttccaaagatggcttatct
ggaggcactgaaagtttggctgatattgttgaggatgaggatgaggatgaaattgtagat
gacggagaagtagatgaaggcgatgttcacatcaagccggtttcaaggaagccccttcag
ctatttgcagaagttgatgtgaagctagtcttcaaggaaatttcatctaaatatttacga
aagcgcattgtagagcgaggaaagcgaagtgatggacggagtccttgggaacttcggccc
atcaattctcaatgtggcttacttccaagagctcatggtagtgctctgttcacgagggga
gaaacacagtcactggctgtggtcactttaggtggctatcagatggcacaacgaattgac
aaccttgttgatacggaggactcaaaaagcttctatcttcagtactcatttcctccatca
tgtgttggcgaagttggtcgaattggagcacctagccggagagagattggacatgggatg
cttgcagaaagggcactggagccaattttacctctggaagaggattttccgtacactatt
cgtgttgagagtactatcactgaaagtaatggttcatccagcatggcttctgtttgtgga
ggttgtttagcacttcaagatgctggggttcctataaagtttcctgttgctggaattgca
atgggcctggtccttgatacacaagaatttggtggagatggtagcccacttatactttct
gatattactggagctgaagatgcctctggtgacatggatttgaagattgctggtaatgaa
agtggcatatctgcatttcagatggacattaaggtagttgggataactctacctgtgatg
gagaaagcactccttcaagctagggaagggagacaacatattctaaatgaaatgttgaaa
tcttcacctccaccctcaaaagcactatctccacacgctccattaattcatgttatgaag
gtcaaacctaacaaggtgaatttaataattggttctggtggaaagacaataaaaagcata
attgaggagactggggtagatgctattgatactggagatgatggcacggtaaaaattact
gcaagagacctaacaagcttagagaagtcaaaaattataatagctaatcttaccatggtt
ccaaaagtaggagaaatatacagggactgtgagatcaagtcaatagctccatatggtgct
tttgttgaaattgctccagggcgtgagggtttatgtcatatcagtgagttaagttcgggc
tggttggccaaggctgaggatgcttttaaagttggagatcgcatagacgtcaagcttatt
gagataaacgataagggtcaacttcggctaagctctcgagctttgcttccagacgtggat
tccgaatccaacataggttcaacaaaagaaaaggtgccacaaaaagatgatgtcataaaa
atgacaacaaaaagaccaaggcgcaagaaacagccagagccgtctggagctgaaaatgcc
acaacaaaggctcttgcgaaaagcgctgctgctccagctggttcaaagggcagtgaagcg
tag
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