Zea mays (maize): 103632101
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Entry
103632101 CDS
T01088
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103632101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103632101
03041 Spliceosome [BR:
zma03041
]
103632101
03036 Chromosome and associated proteins [BR:
zma03036
]
103632101
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103632101
Spliceosome [BR:
zma03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103632101
Complex B
103632101
Complex C
U2 SnRNP specific factors
103632101
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103632101
TFTC complex
103632101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
103632101
NCBI-ProteinID:
XP_008652174
UniProt:
A0A1D6HVM7
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All DBs
Position
7:complement(17473174..17487611)
Genome browser
AA seq
1356 aa
AA seq
DB search
MKPSTAGDASAAAAASSSGPSTSASTSASTSTADATHYIAKRVLRGSAVLHVAEGCFRSP
DSADVVLAKETSLELVAVGDDGVLQSICEQDIFGIIKDIGVLQWHSRHNGLIPQIECKDL
LVVLSDSGKLSLLYFCSEMHRFFAIANIELSKPGNLRHHLGRILAIDRESNFVAVSSYED
KFALIHVSVSQSGSGSGIISEKKYFYPPENEDDARIITSSRTSIRGTIWTMRFISVPQDE
EYYPVLAMIINRKGSDVNDLSLFGYDSSSCVINHLSSYSEIGPLVLDVSEIPETFGFALL
LRVGDALLLDLRNPTNVCCIQRVSLTTNLIGEPITVEDPCPGLDVDDDVAACALLELRDS
GNNIMKDDGYMDIDGVDSRSNVKPRIVCSWSWEPPDPVRRGCARLLFCLDDGEFHILEFT
LDVEGAKLYTFEYIDRTLPCRPLFWMKNRMIIGFVEMGDGMIFKLGHRRLLHKSTIQNVA
PILDLAIADYHGEKQDQMFACCGMSPEGSLRVLRNGVNVDRLLKTEAIYQGVTGLWTLRM
KATDAYHSFLVLSFVEETRILSVGLSFNDISDAVGFQPDVCTLACGLVADNLLVQIYSKG
VKVCLPTVYAHPEGAPLTSPICTDWYPAITISVGAVGHNIVVVATSNPCCLYVLGVRSSS
SYQYELYATHHVQLQYEVSCISIPQEDCIHDNVSFSCGEGDDICKNPPPKVNVCKFAVIG
THRPSVEIISLEPGEALRVLTIGTVSVNNALGAPMSGCIPENVRFVAAERFYILAGLRNG
MLLRFESETRDYLPGFLYKDSSIPSVNTFLQLISIRRIGITPVLLVPIHDSANADIIVLS
DRPWLLHAARHSLAYSSISFLSASHVTPVSSVDCPNGLLFVAESCLHLVELVHGKRLNAQ
KFSIGGTPRKVLYHNESRTLLVLRTGLNGASSSSDVVQVDPQNGVLLSRYKCEPGETAKC
MQIAKIGNDQVLIVGTTKSAGRPMMSNGEAESSIKGRLIVLSLEAVESPRESSSFIPTFS
FNPSSHSGSPFHEIVGYTTEEFSSNSMCSSPDEFSCNQIQAEQMTGQLRSLTQYILNGAV
LALCPYLDRYVLAAAGNMIYVFGFTNENPHRIKKCAVGRTRFTITCLKTFASRIAVGDCR
DGVLFYSYNESHRKLELVYSDPAHRLVGDIALLNCETAVVSDRRGSISVLSCTRLEVSES
PQKNLAVNCSFYMGETAMSIQKAAFRYRLPIDDDTDPVLETVYNCIVASTMLGSLFVMIP
LSSEEHQLLQDVQEKLSVHPLTAPVLGNDHAEFRQRGTPSVVPPILDGDMLVQFLELTGE
QQQAILTHALPGKGQHRPLSVFQVLQTLERVHYALN
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatccaccgccggcgacgcctctgcggcggcggcggcgtcctcttcggggccc
tctacctccgcgtcgacatccgcgtccacgtctaccgcggacgccacccactacatcgcc
aagcgggtgctccggggaagcgccgtgctccacgtcgccgagggctgcttccgctcgccc
gactccgcggacgtcgtcctcgccaaggaaacttcactggagttggttgctgttggtgat
gatggtgttttacagtcaatatgtgaacaagacatttttgggattataaaagatattggt
gtattgcaatggcactctagacataatggtttaattccacagatagaatgcaaagatctt
ctggttgtcctttcagattctggaaagctttctcttctttacttttgttctgagatgcac
aggttcttcgcaattgccaatattgagttatcgaaaccaggaaatctgaggcatcatctg
ggaagaattttagcgatagatcgagaatctaatttcgttgctgtcagttcatatgaggat
aagtttgcccttatacatgtttctgtttcccagagtggttctggcagcggtattatttct
gagaagaaatatttttatccaccagaaaatgaagatgacgcaaggatcataacttcgtct
aggaccagcatccgtggtacaatttggacaatgcgcttcatatctgtgccccaagatgaa
gaatactatccagttctggcaatgataattaacaggaaaggctctgatgtgaatgacttg
tcgttatttggatatgactccagcagctgtgttatcaaccacctctctagttattcagaa
attggacctttggtacttgacgtatcagaaattcctgaaacgtttggctttgcacttctg
ttgcgtgttggtgatgctttattgttggatcttagaaatccaacaaatgtctgctgtatc
caaagagtcagcttgacgactaacctgattggagagccaatcactgttgaagatccctgt
ccaggattagatgttgatgatgatgtggctgcttgtgctttgctagaattgagagattct
ggtaataacataatgaaggatgatggttatatggacattgatggtgttgacagcagaagt
aatgtgaaaccaaggatcgtttgctcgtggagctgggagccacctgaccctgtcaggcga
ggatgtgcaaggcttctattttgtttggatgatggagaatttcatattttggaatttact
ttggatgttgaaggggcgaagctgtacacatttgaatatattgataggactttgccttgt
agacctcttttttggatgaaaaacagaatgataatagggtttgtagagatgggggacggc
atgatttttaaacttggtcaccgcaggttgcttcataaaagcactattcagaatgtagca
ccaatattggatctagcaattgctgattaccatggtgagaaacaggaccagatgtttgca
tgttgtggaatgtcccctgagggctctcttcgagttttaaggaatggtgtcaatgtggac
agacttctgaaaactgaagctatttaccagggtgtcactggtttgtggactttgagaatg
aaggcaactgatgcctaccattcttttcttgtgttgtcatttgtggaggaaaccagaata
ctgtcagtaggactaagttttaatgacatcagtgatgccgtgggattccagcctgatgtt
tgcactttagcatgtggtttggtggctgataatctgctagttcaaatttacagcaaaggt
gttaaggtctgtttgcctacagtatacgctcaccctgaaggtgcccctttaacttctcca
atttgcactgactggtatcctgctatcactatcagtgttggtgctgtaggacataatatt
gttgttgttgctacatctaatccttgttgcttatatgtccttggtgttagatcatcatct
tcttaccagtacgagttgtatgcaacacatcatgtgcaattgcagtatgaagtatcatgc
atatcaatcccacaagaggattgtatacatgataatgtatctttcagctgtggagagggt
gatgacatttgtaagaacccccctcctaaagttaatgtttgcaagtttgctgttattgga
actcatagaccttcagtggaaatcatctccttggaacctggagaagcattaagggtatta
actattgggactgtatctgtgaataatgcacttggcgcacctatgagtggttgtatacct
gaaaatgtcaggtttgttgcggctgagaggttttacattcttgcaggcttgagaaacgga
atgctactcagatttgagtcagaaacacgtgattatctccctggttttctctacaaggac
tcttctattccttctgttaatacattccttcagttgatttcgatacggcgtattggaatt
actcctgtactgttagtgccaatacatgattcagctaatgctgacatcattgttctcagt
gatagaccttggctattacatgcagcaagacatagcctggcatattcgtccatttcattt
ctttctgcttctcatgtcacacctgtttcatctgttgattgccccaatggtctactgttt
gttgctgagagctgtttgcatttggttgaactggttcatgggaagcgattgaatgcacaa
aagttttcaattggagggactccaaggaaagtgctataccataatgaaagcagaacactg
ttggtactgagaactgggctaaatggtgcatcgtcttcttcagatgttgtacaagtagat
ccacaaaatggggtattactttccagatataaatgtgaacctggcgaaacagcgaaatgc
atgcaaattgcaaaaataggaaatgatcaagttttaattgttgggaccactaagtctgct
ggacggccgatgatgtcaaatggtgaagcagaaagcagcatcaagggacgcctgattgtt
ttaagcttggaggccgttgaaagtcctcgtgagagcagttcgtttattccaacttttagt
tttaatccctcttcacattctggttctcctttccacgagattgttggatatacaactgag
gaattttctagtaacagcatgtgcagcagtcctgatgagtttagctgcaaccagatccaa
gctgaacaaatgacagggcaattgagatcattgactcaatatatattgaatggcgcagtt
cttgctctgtgtccctatctagatcgttatgtgttggcagctgctggtaatatgatttat
gtatttggtttcacaaatgaaaatccccacagaataaaaaagtgtgctgttggtaggaca
cgatttacaataacttgcctgaagacatttgcatcacgaattgctgttggtgattgtcgt
gatggtgttctcttctattcttataatgagagtcataggaagttggaattggtctattct
gatcctgctcatagattggtgggtgatattgctcttttaaattgtgaaactgctgtggta
tcagatcgacgtgggagcatatctgtattatcatgcaccagattggaagtttcagaaagt
ccacagaagaacttagccgtgaattgttcattttatatgggtgaaacagccatgagcatt
cagaaggctgcattcaggtatcggcttccaattgatgatgatactgacccggtgcttgag
acagtttacaactgtatcgtggcaagtaccatgttggggagtctctttgttatgattcca
ctttcaagtgaggagcatcagcttttgcaagatgtccaagaaaaactctcagtacaccca
ttaactgcaccggtcctgggaaatgatcatgcagagttccgtcagcgtggtaccccttcg
gtagtgcctcccattcttgacggtgatatgcttgtgcaattcttggagctcaccggtgaa
caacagcaagccatccttactcatgctttgccagggaaggggcaacataggcccctctcg
gttttccaggttttgcaaacattagagcgcgtccattacgctcttaactga
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integrated database retrieval system
