Zea mays (maize): 103632446
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Entry
103632446 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC103632446
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103632446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103632446
03019 Messenger RNA biogenesis [BR:
zma03019
]
103632446
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103632446
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103632446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
zf-C2HC_2
Pcf11_C
Motif
Other DBs
NCBI-GeneID:
103632446
NCBI-ProteinID:
XP_008652477
UniProt:
A0A1D6I0L1
LinkDB
All DBs
Position
7:complement(72242235..72249352)
Genome browser
AA seq
1049 aa
AA seq
DB search
MRASASAVPMEASASARRSAASPDPGAKKPRLAQPPARDPRSYAAAAAASNGGASAAEQA
LVDELLGQYRTALGELTFNSKPIITNLTIIAGENLQAAKPIAAVICANILEVPSEQKLPS
LYLLDSIVKNIGKDYVKHFSARLPEVFCKAYKQVDPSIHHSMRHLFGTWKGVFPLPPLQT
IEKELGFQSSTNGLSGAAPSRTDSQSPRPSNSIHVNPKYLEARQQLNQPTKGILGSGAKT
AVIADTDDDIERANRLGTERSAGRRLDAPNARPNIEHIQRDPFSNPIHEKLAGRDVRGLG
FSNTSQQAVVGTGQVRSKPRGQDGIGGPYYASGVVSSEEKIDKRSNFYTSKDVRPSGSVH
FDSALLPTRSINANRVGRPSSNKSWKHSEEEEYVWDDVPSKTTEYSGTHNIIKGEWMSDD
GNAKFASLQSAKWADAGPVECIDPKTHKVDNVSRFGFAAGQERRISAYMDQEEYLLGKRE
VEARIDREIRPYGQQFPAARDSSLWVSQEKALPDNGLDPWVSKFSNQPAEMSICTGTMPA
SIISSVPVRLSGHYAGRSNLDTTNSVPIRSTEAFGQQKHRYWSSSPPQAHPPSSTAPFAR
QGSPNHDESDFYPSGSFSQLGQDPQEEYSQRALPVLAKGSHVVVHNDELTQGQPSLQATL
QTQKYPIIQSKSHINPSDQLQASFLCENSPSLFRPSIQLGEVSLPSDSTPISSDLTSASN
LLAGLIKSGFKPSNHSDAQPLGPSGSLLVASLSLQNAAGENTILQTQTPNTSRPPLPPGL
PPPPSTQSAEKAAPLSSLLSSLVAKGLISSPASDSSDAVISQPNKESSINGKDVAASGVP
LPALKSSFGKVSSSNSDSSAPPNASLPKAIEIEMGDLIGLEFKPEKLRKYHEHVISYLDD
QSHQCKMCGNRFGLEELSLHTSSCGPRESRTIYTGIAPKRWYPSRNIYIDGSHEIEDSAE
ASDAGLGSAEVCEFMVHADERQIICALCGEPFDDVYSFEKGNWMYKDAVFLDYAKGKNSC
GNNVKGEEHVPIVHVRCMPRGSNDGMDVD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctccgcctccgctgtccccatggaggcctccgcctccgcccgcagatccgcc
gctagccccgaccccggcgcgaagaagccgcgcctcgcgcagccgccggcacgggacccc
agatcttacgccgctgccgccgccgcctccaatggcggcgcaagcgccgccgagcaagcg
ctggttgacgagctgctcggccagtaccggaccgcgcttggggagctcaccttcaattcc
aagcccatcatcaccaacctcaccatcatcgctggcgagaacctccaggccgctaagccc
atcgccgccgtaatctgcgccaacatcctcgaggttccaagtgaacagaaactaccatcg
ctgtatctgcttgacagtattgtaaaaaatattggaaaagattatgtcaaacatttctca
gcaagattaccagaggtgttctgcaaggcatataaacaagttgatccttctatacatcat
agcatgaggcatctttttggaacatggaaaggagtgtttcctctacctcctctccaaacg
attgagaaggaacttggttttcagtcatctaccaatggattatcaggtgctgcaccatca
aggactgattctcaatcgccgcgtccatccaatagcatacatgtaaatccaaaatatttg
gaagcgaggcagcagctcaatcaaccaactaaggggatacttggaagtggtgctaagaca
gctgtaattgctgatacagacgatgatattgagagggctaataggctaggtactgaaaga
agtgcagggagacgattggatgctcctaatgctagacctaacatagagcacattcagagg
gacccttttagcaatcctattcatgaaaaacttgcaggtagagatgtgaggggccttgga
ttctccaacacttcacagcaggctgttgtgggaactggtcaagttcgctcaaaacccaga
ggccaagatggaattgggggaccctattatgcctctggtgttgtgtcttctgaagaaaaa
attgacaagcgcagcaacttttatacaagcaaggatgttcggccatcaggatctgtacat
ttcgatagtgctcttcttccaactcgatcaattaatgctaatagagttggtaggccttca
tcaaacaaaagctggaagcactctgaggaagaagaatatgtttgggatgatgtaccctct
aaaacaacagaatatagtggtacccataatataataaaaggagaatggatgtctgatgat
ggcaatgctaagtttgcaagcctccaaagtgctaaatgggcagatgcaggacctgtggaa
tgtatagatcccaagacacataaagttgataatgtgtcaagatttggatttgcagcaggt
caagaaagaagaatttcagcatacatggatcaggaagagtaccttcttggcaagcgtgag
gtggaagctagaattgatagggaaattaggccctatggacaacagttcccagcagctcga
gattcctctctctgggtgtcccaggaaaaagcactccccgacaatgggttggacccttgg
gtatcaaagttttcaaatcagccagcagagatgtccatttgtactggcaccatgccagca
agtatcatatcatctgtacctgttaggttatcaggacactatgctggaaggtcaaaccta
gatactacaaatagtgtgccaataagatcaactgaggcttttgggcagcagaagcataga
tattggtcatcttcccctccacaagctcacccaccttcatctactgcaccctttgcacgt
cagggttctccaaatcatgacgagtctgatttttatccttctggatcattttctcaattg
ggccaagatcctcaagaagaatatagccagagagcattgcctgtacttgctaaaggttct
catgttgtggttcacaatgatgaacttactcagggccaacctagtctacaggcaaccctg
cagacacaaaagtaccctatcatacagtccaagtcacatattaatccatctgatcaattg
caagcaagctttttgtgtgaaaattctccatcactgttcagaccttccattcagcttgga
gaagtatctttacccagtgattccacccctataagctcagatctgacaagtgctagtaat
ttgttggctggtctcataaagagtgggttcaaaccaagtaaccacagtgatgcacagcct
cttggtccgagtggctcacttctagtggcttctttatcacttcaaaatgctgctggtgaa
aataccattttgcagacacagacaccaaacacttctcgtccaccattgccaccaggtcta
ccaccacctccatcaacacagagtgcagagaaagctgcgccgctctcgagtcttctcagt
tccctggttgcaaagggattaatctcttctcctgcctctgattcatctgatgctgtcatt
tcacagccaaataaagaatcaagcataaatggtaaagatgtcgcagcttcaggtgtgcct
ttgccagctctgaagtcttcatttggtaaggtgtcatcatctaattctgattcatctgcc
ccaccaaacgcttcgttacccaaagctatcgaaattgagatgggtgacctcattggcctg
gagttcaagccagagaaacttcgcaagtaccatgagcatgtaattagctacctcgatgac
caaagccatcagtgtaaaatgtgtggtaataggttcgggcttgaagaactgagtttgcac
acatcaagctgtgggccaagggagtcaaggactatctatactggtatcgcacctaagaga
tggtatcctagcaggaacatttacattgatggatcacatgaaattgaggatagcgctgag
gcttctgatgcaggtttaggttctgcagaagtgtgtgagtttatggtccatgcagacgag
aggcaaattatctgtgcactgtgtggggaaccatttgatgacgtatattcttttgagaag
gggaactggatgtacaaggatgcagtattcttggattatgccaagggtaaaaatagctgc
ggaaacaatgttaagggtgaagagcatgtgcctatagtccatgtaagatgtatgccaaga
ggctcaaacgatggcatggacgttgactag
DBGET
integrated database retrieval system
