KEGG   Zea mays (maize): 103632647
Entry
103632647         CDS       T01088                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
zma  Zea mays (maize)
Pathway
zma03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103632647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    103632647
   03041 Spliceosome [BR:zma03041]
    103632647
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103632647
Spliceosome [BR:zma03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103632647
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 NBCH_WD40
Other DBs
NCBI-GeneID: 103632647
NCBI-ProteinID: XP_008652625
UniProt: A0A1D6I353
LinkDB
Position
7:complement(102973625..102985410)
AA seq 381 aa
MATAAAQSHPASMDARRWDESSYRRGILRARDLSSRTLFRAVFFDHSDDPDTDILLAAAS
SDGSLASFSLSSCISACSATSQVETAATLVDPVCIVQAHSGPAYDVRFYPDQQQPLLFSC
GDDGRIKGWRWHEMQSCLVPLSLQGDHLEPALDLVNPQHEGPWGARSPVPENNAIAINKQ
DGSILAAAGDACAYCWDVETSKCKITFKGHADYLHSIAVRESNRQVVTGSEDGTARIWDC
RSGKCTRVIQPGKSKAFESSWVSCVAIDPSESWLACGTSSGISVWSLLSNECIFNLDCHA
PVQDLLFDKNHILAVGAEPLLSRLTINGTVLSQVKCAPQSAFSVSIHSTGIAAVAGYGGL
VDVISEVGSHLCTFGSRGLDK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggcgacggcggcggcgcagtcccatccggcatcgatggacgcgcgccggtgggacgag
tcatcgtaccgccgcggcatcctccgtgcccgcgacctctcgtcccgcaccctcttccgt
gccgtcttctttgaccacagcgacgacccggataccgacatcctactcgccgccgcctcc
agcgacggctccctcgcttccttctccctttcatcctgcatctccgcatgttccgctacc
tcccaggtggagaccgccgccactctggtagatcctgtctgcatcgtgcaagcgcacagc
ggacctgcctacgacgtcaggttttaccccgatcaacagcagccgctgctcttcagctgc
ggggacgatggccgcatcaagggttggaggtggcacgagatgcagagctgccttgtcccg
ctctccctgcaaggggatcatctggaaccagcacttgacttggtcaaccctcagcacgag
ggtccttggggtgctcgatctccagtacctgaaaacaatgccattgcaattaataaacag
gatggatccattttggcagcagcgggtgatgcatgtgcttactgctgggatgtggagacc
agtaaatgtaaaatcacattcaaggggcatgctgattatttgcacagcattgcagttcgt
gagtcaaaccgccaggttgtaacaggatcagaggatgggacagctcgtatctgggattgc
agaagtgggaagtgcactcgggttatacagccaggaaagagcaaggcatttgaaagctca
tgggtcagctgtgttgctattgatccaagtgaaagttggctggcttgtggcacgtctagc
ggtatatcagtttggagtcttctctcaaatgagtgcatctttaatttggactgtcatgct
cctgttcaagatttattgtttgacaagaatcatattttagcagttggcgctgaacctctg
ctctcccgtctcacaataaacgggacagtcctttcacaagtaaaatgtgcccctcagtcg
gcgttttctgtctccatccactcaactgggatagcagctgttgctggatacggaggtctg
gtggatgtgatctcagaagttgggagccatctgtgcacattcggtagccggggcctagac
aagtaa

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