Zea mays (maize): 103633530
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Entry
103633530 CDS
T01088
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X3
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103633530
03036 Chromosome and associated proteins [BR:
zma03036
]
103633530
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103633530
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103633530
SLIK complex
103633530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
SLIDE
Chromo_MIT1
Semialdhyde_dh
Motif
Other DBs
NCBI-GeneID:
103633530
NCBI-ProteinID:
XP_008653436
UniProt:
A0A1D6IMC7
LinkDB
All DBs
Position
7:complement(180354939..180375097)
Genome browser
AA seq
1724 aa
AA seq
DB search
MAFFSNSGSKADSGGYNLNEKAEDEGIYESVQDGNVDLSSRQWNLNEKADDAYHCEAEQY
EAGQSGLYSSEKASGQHIQKGGRSSGGPWGTNFLKDSRSKQMAEDVPSNSGRGMNAASLH
DGLDDSGEDDELNRANGEVPAEEMLSDDYYEQDGEEQIESLHRGGTKQSSCSTSGGAAKS
GSRQMKASKYNAYDDDDDDDYNDENDDDNDADEDDPADVDFEPDSETDKATDKDKFMDSE
NSDGDDDDGLELSDDDDDFVENRRQPKRLKIVATKTSKGRKLPMPAQRKRGVSHSDEEYS
SGKDSDLPSDADFKHRSKRPDRLHQKSVGRSDVAPINSHNELRTSGRRTVKKISYVESEE
SDDSEEKSTKQQKLMKEELEEEDGETIEKVLWHQPKGVAEEAIKNHQSAQPTVVSLTSDF
DQQWDELEFYIKWKGQSYLHCQWKTLSELQSVSGFKKVINYTKRVAEEQRYKRALSREEV
EVHDVGKEMELDLIKQYSQVERIFADRVSKADGDDLVPEYLVKWQGLPYAESTWEKDTDI
DFAQDAIDEYKAREAATSILGKTVDFQRKKSKASLRRLDDQPEWLKAGKLRDYQLEGLNF
LVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTLSNWAKEFRK
WLPNMNVVIYVGNRASREMCQKHEFFSDKKGGRHVKFHTLITTYEVILKDKAVLSKIKWN
YLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKD
SFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY
KWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKVERI
VMSSGKLVLLDKLLVRLRETNHRVLIFSQMVKMLDILAEYLSLRGFQFQRLDGSTRADLR
HQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ
QETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGGSIFDKNEL
SAILRFGAEELFKEDKTDEEAKRNLESLDIDEILERAEKVETKGGEGEEGNELLSAFKVA
NFSSGEDDATFWSRLIQPDPADIIQETLAPRAARNKKSYVEDPQFDKNNNRKRRAVEAQE
KPRRRSGRTVETVNSVPLVDGAVAQVREWSFGNIPKKDASRFVRAVKKFGNATQIDLIVD
DVGGVLEKAPHEAQIELFDLLIDGCQKAVKENTDIKGTVLDFFGVAVKAYELLARVEELQ
LLSKRIARYKDPIKQYRIQLPYKKPQWSASCGWTETDDARLMVGIHWYGYGNWEKIRLDP
KLGLTTKIAPATLGERETFLPRAPNLDNRASALLQKEYAKFSGNSSKVKGNARQTVNNDS
NSGARSMRGRQKDAPDKEDNKPNKDDIQKRKVMMEAEAREEGEISESEAETKYRLDKEEK
WLEWCSEVLNEEQETLKRLDRLQNTSVNLPKEKVLSRIRKYLLIIGDKIGEVVRQHSESY
RQSRMTMRLWNYVATFSNMSGEQLHDLYLKLSQDQLEGGVGPSHGANFTSIPSSKGGNSN
QLHPTRNHRPTRSLQYNSESLHNNESSGSSEAWKRRRRADPDNQFDTQPLYQPPIMTNGN
RLQESSSSAGILGWGPVEMRRYGNERPKRGVHPSHFPTGHGPLL
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaactccgggagcaaggctgattcaggagggtacaacctgaatgaa
aaggccgaagatgagggcatctacgagtcagttcaggatgggaatgttgacctgagttct
aggcagtggaacttaaatgagaaagcagatgatgcttaccattgtgaagcagagcaatat
gaggcgggccagtcaggtttgtactcttctgagaaggcatcagggcagcatatccagaaa
ggaggcagatcttctggtggtccatggggcacaaattttctgaaggattccaggtccaaa
cagatggccgaggatgttccatcgaatagtggtagaggaatgaatgctgctagcttgcat
gatggcttggatgatagtggagaggatgatgagctgaacagggcaaatggtgaggtgcct
gctgaggaaatgctctccgatgactattatgagcaggacggagaggagcagattgaatcg
ttgcatcgtggcgggacgaagcaatcaagctgttccacttctggtggggcagcaaaatct
ggctcacgacaaatgaaggcgtcaaagtacaatgcttatgacgacgatgatgacgatgac
tataatgatgagaatgacgatgacaatgacgctgatgaagacgaccccgctgatgtggat
tttgagccagacagcgaaacggacaaagctactgataaggataagtttatggatagtgag
aattctgatggcgacgatgatgatggccttgaactctcagatgatgatgatgactttgtt
gagaaccggaggcaacctaaacgacttaagattgtagcaactaaaacttccaagggaagg
aagttgcccatgccagctcaacgaaaacgaggggtgtctcacagcgatgaagaatattct
tcaggaaaagattcagatcttcccagtgatgctgatttcaaacacagatcgaaaagacct
gacaggttgcatcagaaatctgtgggccgcagtgatgttgccccaatcaattctcataat
gagcttcgaacttctggaaggaggacagtgaaaaagatctcatatgttgaaagcgaagaa
agtgatgatagcgaggagaagtcaactaaacaacaaaagctcatgaaggaggagctggaa
gaggaagacggagaaacaattgaaaaagttctttggcatcaacccaagggtgtagctgaa
gaagcaataaagaatcaccaatcagctcaacctactgttgtcagcctaacatcggacttt
gatcaacagtgggatgaattagagttctatataaaatggaaaggccagtcttacctgcat
tgtcaatggaagacattatcagagcttcaaagtgttagtggattcaagaaggtaataaat
tacacgaaaagagttgctgaggaacagaggtacaagagggcactatcacgtgaagaggtt
gaggtgcatgatgtgggcaaggagatggagctggatcttattaaacaatatagtcaggtt
gaacggatatttgctgatagggtcagcaaagctgatggagatgatctggttcctgaatat
ttagtcaaatggcaaggacttccttatgcagaatctacctgggaaaaagatacagatatc
gattttgctcaagatgcaattgatgaatataaggctcgtgaagctgccacatctatactt
gggaaaacagtagatttccaacgaaagaaaagcaaagctagtttgaggaggcttgatgat
cagccagaatggctaaaagctggtaagcttcgtgattatcagctggaaggactaaacttt
ctcgtgaatgggtggagaaatgatactaatgttatacttgctgatgaaatgggtctgggg
aaaactatccaatctgtttccatgcttggcttccttcataatgctcaagaaatcaatggt
ccatttcttgtagttgtgccactgtcaacattgtcgaactgggcaaaagaatttcggaag
tggctgcccaacatgaatgttgtcatttatgttggcaaccgtgccagcagagagatgtgc
cagaagcatgagtttttttcagacaagaagggtgggcgtcatgtaaaattccatacgttg
ataactacatatgaggtgattctcaaggacaaagcggttctttccaagatcaaatggaac
tatcttatggttgatgaagcccaccggttgaaaaattgtgaagcatcactatatactacc
cttttggaattcagcactaagaataagctgcttatcactggaacacctttgcagaacagt
gtggaagagctttgggcattacttcatttccttgatccagttaaattcaacagcaaggat
agttttgttgaaagatacaaaaatttgagttccttcaatgaaaccgagcttgcgaatctg
cataaggaattgaggcctcatattctaaggcgggttataaaagatgtcgagaagtcttta
cctcctaaaattgaacggattctacgtgtcgagatgtcaccccttcagaaacaatactac
aagtggattttagagcggaatttccagaatctaaataaaggagtccgtgggaatcaggta
tcacttttgaacattgttgttgaattgaagaaatgctgcaaccatccatttttgtttgaa
agtgccgatcacggttatggtggagatagcattggcgatcggaataaagttgaacggatt
gttatgagtagtggtaaacttgtcttgttggacaaactattggtgagactacgggagact
aaccatcgtgtgcttatattctcacagatggttaagatgttggacatccttgcagaatat
ctctcccttcggggatttcagtttcagaggcttgatggtagtacaagagcagatcttcgt
catcaagccatggaacattttaatgctcctggaagtgatgacttctgttttcttttatcc
acacgtgccggaggacttggtattaatcttgcaactgcagatacagtgataatttttgat
tcagattggaatccacaaaatgatctgcaggccatgagtagggcacataggattggccaa
caggaaactgttaatatctaccgcttcgtcacatgcaaaagtgttgaagaggatattttg
gaacgcgcaaagaaaaagatggttcttgatcacttggttattcagaagctaaatgctgag
ggcaggcttgagaagaaagaatccaaaaagggtggctccatatttgacaagaatgaactt
tcggctatcttgaggtttggagcagaggaattgttcaaagaagacaagactgatgaagag
gccaagagaaaccttgaaagtttggacattgatgaaattcttgagagagcagagaaagtc
gagacaaagggtggtgaaggggaggaaggaaatgagcttcttagtgctttcaaggtcgca
aacttttccagtggcgaggatgatgcaacattctggagtaggctaatacagccagatcct
gcagatattattcaggaaactttggcgcctcgtgctgcacgtaataaaaagagttatgtt
gaagatccccagtttgacaaaaataataacaggaaaagacgtgcagttgaagcacaagaa
aagccaaggaggcgttctggcagaacagtggaaacagttaattcagtaccattggttgat
ggagcagtagctcaagtacgagagtggtcttttggtaatattccaaagaaggatgcttct
cgttttgtacgagcggttaaaaaatttgggaatgcaacccagattgacttaattgtggat
gatgttggtggtgtactagagaaggcaccacatgaagcacaaatagagctatttgatttg
ttgattgatggttgtcagaaagctgttaaagagaatacagatatcaagggcacagttttg
gattttttcggtgtagctgtgaaggcctatgaattgctagctcgtgttgaagagcttcag
ttgttgtcaaagcgcattgcacgatacaaagatccaatcaagcaataccgcatccaacta
ccttataaaaagcctcagtggtcagcaagctgtggatggactgaaactgatgatgctaga
ttgatggttggaattcattggtatggctacgggaattgggagaaaatacgtttggatcca
aagcttggcctgacaacaaaaattgcaccagcaacacttggtgagagagagacattttta
ccacgtgctccaaacttggataaccgtgctagcgctctcctgcaaaaggaatatgctaag
tttagcggtaatagctcaaaagtcaaaggaaatgcccgccagacagtcaataacgacagt
aatagtggagctcgatcaatgagaggccgacaaaaggatgcaccagataaagaggataat
aagccgaacaaagatgacattcagaagcgcaaggtaatgatggaagctgaagcaagagaa
gaaggtgaaatttctgaatcagaggcagagacaaagtatcgtctggacaaagaggagaag
tggctcgaatggtgctctgaagttttaaatgaggaacaggaaactttgaagcgcctggac
aggctgcagaatacaagtgtaaacctcccaaaggaaaaggttctttcaagaatccgcaag
tatctcctgataattggggacaaaattggtgaagttgtccggcaacacagtgaatcttat
aggcaatcccgcatgaccatgaggttatggaattatgttgccaccttttcaaacatgtct
ggggagcaattgcatgatctctatttgaaacttagtcaagaccaactggaaggtggagtt
ggcccatctcatggtgccaatttcacatccattccttccagcaagggaggtaactcaaat
caacttcatcctacaagaaaccataggccaaccaggtctctccagtacaattctgagtct
ttgcacaataatgagagctctggaagttctgaagcctggaagcgtcgacggagagcagac
cctgataatcagtttgacacccagcctttgtatcaacctccaattatgacaaatggaaat
aggttgcaggaatctagtagttctgcaggaattcttggttggggtccagttgaaatgaga
cggtatggtaatgaaaggccaaagcgtggtgttcatcctagtcattttcctactgggcat
ggacctttgttgtag
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integrated database retrieval system
