Zea mays (maize): 103633605
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Entry
103633605 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC103633605 isoform X1
KO
K06100
symplekin
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103633605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103633605
03019 Messenger RNA biogenesis [BR:
zma03019
]
103633605
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103633605
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103633605
U7-dependent histone pre-mRNA processing factors
103633605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_EZ
HEAT
HEAT_2
HEAT_GCN1
TPR_DNAAF5
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
103633605
NCBI-ProteinID:
XP_008653537
UniProt:
A0A1D6IPH9
LinkDB
All DBs
Position
7:183788683..183809362
Genome browser
AA seq
1242 aa
AA seq
DB search
MLAARNPPPPPHDIAARLHHLRDLRRVPLPNRVARIADLHTDEASPVRKLVAEIIGELGS
KHMRYLPDMIPCLLHLLNDETPAVVRQAVKTGTNLFAKVLQKLAIQGLFSNGGIDDALKS
SWEWLLKFKSGVSHMAFQATGNEGVRLLAIKFVEKTVLMYTPDPDVPSDPPTETTEDMAF
NVAWLRGGHPLLNVGDLAMEASQSLGLLLEQLKSPKVKSLSTSMIIVFVTSLSAIAQRRP
SFYGRILPVLLSLDPASSIIKLRVPGAFHALKSAFSACLKCTHSSAEPWRARLLEAQNII
NQGGSIEDAANAAKNFGDTSNREESWPLMERSTDGSNKRSLAEDMNHVTEDDVHSTKRAR
QSIDANEHSEEANKTNFESMSVDISSSQPSSIRTGNSEAVYQLIGMFAALAAQGDRAAGS
LQILSYSIASDLLAEVVMVNMQHLPISRPEVDQQQLPSTSSGDGLPLSSFSSLLGILLKG
ANQIDQDEVSPAKEPALVSSVADDRMILPANSPVPSSVNLPIEENSNSPTVPLCIETTEA
KVTSAGGNSSIDIPESSEASHASTEPQGTQEHASTFAGPFPADNFSVGFSLAQSSETRSP
SSSTLEANHSQLSSLSSQYVLPKLVVNNIDLSDEAKDLLQKEAFVRILESDKKEASGGSI
ARLPLLAHLGVEFPLEFDPWVILQKHILSDYANNEGHELTICILNRLYHEAEQDHDFLSS
RTATSVYESFLLNIAENLRDMFPASDKSLGKLLCEIPYLPEGVLKLLESLCSPGSNERQD
KDIQSGDRVTQGLSAVWNLIMLRPSNRDRCLEIALQSSTHHLEEVRMKAIRLVANKLFPM
TSISKKIEDFANEKLNSVLEMTPSGDCVTTEMATPEAHKDIGLENLTASVTGMQTLMSLY
FALCTKKHSLLRHVFAIYGNLPQAAKQAVHQQVPILIRTIGSSSDLLGIISDPPADCRDL
LMQVLQTLTDAAVPSKDLISSIKILYSKTKDVEFLFAILVHLPKDEVLPVFPSIVNLPID
KFQSAISRILQGSPRNGPSLDPSEILIAIHVIAPDKEGIPLKKVMDACSSCFEQRTIFTQ
QVLAKALNQLVEQIPLPLLFMRTVMQAIGVFPALVDFVMEIMSRLVSKQIWKYPKLWVGF
LKCAILTKPQSYGVLLQLPAPQLENALSKNPTLKTPLAEHAEQPNIRSTLPRSTLVVLGL
AEDQPQQPAVTQVQSSQNQAAETSSSAADTATEVTQESSGAS
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgcccggaacccccctccgccgccccatgacatcgccgcgcgcctccaccac
ctgcgcgacctccgcagggtgccgctccccaaccgcgtcgcgcgcatcgccgacctccac
accgatgaggccagccccgtgcgcaagcttgttgccgagatcatcggtgagcttgggtca
aaacacatgaggtatctacctgatatgatcccttgtttgctgcaccttctgaatgatgag
acgcctgcagtcgtcaggcaagctgttaagacaggaaccaacttgtttgccaaagtactc
caaaagctagctatccagggtttattctccaatggagggattgatgatgcacttaaatca
tcatgggaatggctgctcaagttcaaatcaggtgtctcgcacatggcatttcaggccacc
ggcaatgaaggtgtcaggttactggctattaagtttgttgaaaaaacagttcttatgtac
acaccagatcctgatgtcccatctgatccgccaactgaaacaacagaagatatggcattc
aatgtagcttggttacgaggaggtcaccctttgcttaatgttggggatctggccatggaa
gccagccagagtcttggattgttgctagagcagctcaagtctcctaaagtaaagtcactc
agtacttccatgatcattgtcttcgttactagtctctcagctattgcccaaagaaggcct
tcattttatggacgcatattgccagttttactttccttggatccagcaagttctattatt
aaattgagagtcccgggcgcattccatgccttgaagagtgccttctctgcatgcctgaaa
tgcacacattcaagtgctgagccgtggcgagcacgcctattggaagctcaaaatattatc
aaccaagggggttcaatagaagatgcagcaaatgctgctaagaatttcggggacacttca
aacagggaagaatcgtggcctctgatggagagaagcactgacggtagtaacaagcgtagt
ctggctgaagacatgaatcatgtgacagaggatgatgtccactccactaaaagagccagg
caatcaattgatgctaatgaacatagtgaagaggcaaacaagacaaattttgagtcgatg
tctgttgatatctcatctagccagcccagctctataagaactgggaattcagaagctgtg
tatcaattaattggtatgtttgctgcactagctgcacaaggtgacagagcagctggatca
ctgcaaatcctttcatacagtatcgctagtgacttactagcggaggtggtaatggttaac
atgcaacatctcccaatctctcgtcctgaagttgaccaacagcagcttccttctacgagc
tctggagatggacttccactttcaagtttctcctctctgctggggattctgctgaaggga
gcgaaccaaattgatcaagatgaagtgtctccagctaaagaacctgcgctggtgtcgtca
gttgcagatgacagaatgatacttcctgctaattcacctgttcctagctcagtaaatcta
cctatcgaagagaacagtaacagtccaacagttccattatgtatagaaacaacagaggcc
aaagtaaccagtgcaggtggcaatagttcgattgatattccagaatcatcagaagcttcc
catgcctcaacagagccccagggaacccaagagcatgctagcacttttgccggtccattt
cctgctgataatttctcagttggatttagtttggcacaatcgtcagaaactcgcagccca
agctcttctacattggaagcaaaccactcacagctttcatcccttagttcacaatatgtt
cttccaaagttggttgtcaataatattgatctcagtgatgaggccaaagatctccttcaa
aaagaggcgtttgtgcggattcttgagagtgataagaaagaagcatctggtggttcaatt
gctcgccttccgttgcttgctcacctgggtgttgagtttcctctggaatttgatccttgg
gtgattcttcaaaagcacattctctctgattatgcgaataatgaggggcacgagttgact
atatgcatcctgaaccggctatatcatgaggcagagcaggatcacgatttcctttcatct
agaactgctacatcagtttacgaatcctttcttctaaacatagctgaaaatcttcgagac
atgtttccagcttcagataagtcacttggcaaattgctttgtgagataccatacttacca
gaaggtgtgctgaaactgcttgaaagtttatgttctcctggaagtaatgagaggcaggac
aaggatattcagagtggtgatagggtaactcaaggtctcagtgctgtctggaaccttatc
atgctaagaccttcaaatcgggacagatgtctggagattgctttgcagagttcaactcat
catctagaggaggtccgcatgaaggcaatacgtttggtggcaaataagttatttcctatg
acaagcatttccaaaaagattgaagattttgcaaatgaaaaacttaattcagtgctggaa
atgactccatctggtgattgtgtaactactgaaatggctacacctgaagcacacaaagat
attggtttagaaaacttaacagcttcagtaacaggcatgcagactctgatgtctctatac
tttgcattgtgcaccaagaaacattcccttctcagacatgtatttgcaatatatggtaat
ctaccgcaagctgccaagcaggcagttcatcaacaagtaccaattctgatacgcactata
ggctcctcctctgatcttcttggaatcatctcagatccaccagctgactgccgggacctc
ctcatgcaggttttacaaaccctcactgatgctgcggttccatctaaagatctgatttct
tccataaagatcttatattctaaaacaaaggatgttgagttcctttttgcaatcttggtt
catctaccaaaagatgaggtcctgcctgtgttccccagtattgttaatcttccaatagac
aagtttcaaagtgccatttcccgaatcttgcagggatcacctcggaatggcccttcactt
gatccatcagaaattttaattgcaattcatgtaatagctcctgataaggaaggaatacca
ctcaaaaaggttatggatgcatgctcttcttgctttgagcaaagaacaatatttacccag
caagttctggcaaaagcactaaatcaactggttgaacagattcctcttcctttgctattc
atgaggactgtcatgcaagcaataggtgtttttcctgcattggtggattttgtgatggag
atcatgtcacgccttgtgagcaagcagatttggaaatatcccaagttatgggtaggattt
ctgaagtgtgctatcttgacaaaacctcagtcatatggtgtgttgctgcagttaccagct
cctcaacttgagaatgccttgagtaagaacccgacactgaagacgcccttggctgagcat
gccgagcagccaaatattcggtcgacacttccaaggtctactttggtggttctgggtctt
gctgaagatcaaccacagcaaccagcagtaacacaggtgcagagcagccaaaaccaggct
gcggaaaccagtagctctgctgctgatacggctacagaagtaactcaggaatcttctggt
gctagctaa
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