KEGG   Zea mays (maize): 103635427
Entry
103635427         CDS       T01088                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
zma  Zea mays (maize)
Pathway
zma03420  Nucleotide excision repair
zma04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103635427
  09124 Replication and repair
   03420 Nucleotide excision repair
    103635427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zma04121]
    103635427
   03400 DNA repair and recombination proteins [BR:zma03400]
    103635427
Ubiquitin system [BR:zma04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     103635427
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103635427
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103635427
SSDB
Motif
Pfam: MMS1_N CPSF_A RecG_wedge
Other DBs
NCBI-GeneID: 103635427
NCBI-ProteinID: XP_020398909
LinkDB
Position
8:79310160..79332214
AA seq 1089 aa
MNVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNETQDFLFIATERYKFCVLQWDTEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL
YQDNKDVRHVKTYEVALKDKDFIEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC
NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE
TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVIDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL
VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNP
IGEHLEYSSLAAVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFVDD
NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES
AIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERAKLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGKIPTVIFGTINGVIGIIASLPHDHYTFLEKFQSTLVKY
IKGVGNMSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEVVSKAMGVSVEDLSK
IVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgaacgtgtggaactacgtcgtcacggcgcacaagcccacaagcgtcagccattcctgc
gtcggcaactttaccagccccaaccagctcaacctcattatcgcgaaatgcacccggatc
gagatccatttgcttacccctcagggccttcagccgatgcttgatgtgcctatatatggg
agaattgcaacgattgagctcttccggcctcataatgagactcaggattttcttttcatt
gctacggagaggtacaaattctgtgttctgcaatgggacacagaaaaatcagagctaatc
accagagccatgggtgacgtttctgatcgcattggccgccctactgacaatggacagatt
ggaatcatcgaccctgactgtagactcattggtcttcatctctatgacggcttatttaag
gttataccatttgacaacaaagggcagctgaaggaagctttcaatatcagactggaagaa
cttcaagtactggacatcaaatttctgcatggttgtgttaaacctacaattgttgtcctc
taccaggataataaagatgtgaggcatgttaagacttatgaagttgcactgaaggacaaa
gattttattgagggcccttggtctcagaataatgtagacaatggtgctggtttgttgata
cctgtaccagctccacttggtggtgtgataataattggcgaggagcaaatagtttactgc
aatgccaattctacatttaaagcaataccaataaaacaatccattattagagcttatgga
cgggttgacccagatggttctcgatatttacttggtgataatactggaattctgcattta
cttgtccttacccatgaacgagaaagggttactggtttgaaaattgaatacctgggggag
acttcgattgcatcatcgatttcatatcttgataatggcgttgtttatgttggttcacgg
tttggcgattcacagctggtgaagctgaacctccaagctgatgcaagtggttcatttgtt
gaaattctcgaacggtatgttaatcttggaccgattgtggacttctgcgtgattgacctt
gataggcagggtcaaggtcaggtggtcacttgttctggggcatttaaagatggttccctt
cgggtggttcggaatggtatagggattaatgagcaggcttcagtagaactccaaggcata
aagggattatggtcattgaaatcttctttcaatgatccatatgacatgtaccttgttgtg
agctttataagtgagacacgattcttggcaatgaacatggaagatgaacttgaagagacc
gagatagaggggtttgatgcacaaactcagaccctgttttgtcaaaatgcgatcaatgac
cttcttatacaggttactgctaattcggttcgattagtcagttgtacctcccgggagcta
gtggatcagtggaatgcaccagcaggattctcagtcaatgttgcttcagctaatgccagt
caggttctgttggcaaccggtggtggccatcttgtttacctagaaattagggatgctaaa
cttgttgaagtgaagcatgcacagttagaacatgagatttcttgtcttgatttgaaccca
attggagagcatctagagtatagttccctagctgctgttgggatgtggacagatataagt
gttagaatattttcacttccagatcttgtattaataaggaaagaaaatttgggtggagaa
attgttcctcggtctgttctgctgtgcaccttggagggggtttcgtatttactttgtgct
cttggggatggtaatctgttcagttttctgctgaatgcaagcacaggtgaactgactgat
agaaaaaaggttaccctcgggacccaaccaatcagccttcgtacattctcatcaaagggt
accacccacgtgtttgcttcatcagataggccaactgtcatctatagcagcaataagaag
cttctctatagcaatgtaaatttgaaagaggttaatcatatgtgccctttcaatacagcc
gcttttccagacagtcttgcaattgctaaagagggtgagctttcaattggaactattgat
gatatccagaagcttcatatccgcacaatcccccttaatgaacaagcacgccgcatttgc
caccaggagcaatcaaagacactagcattttgcagtttcaagtacaaccagagtgtggag
gaaagtgagactcacttaatacgtctgctagatcatcagacttttgagtccctgtgtgtg
tatcctctagaccagtatgaatgtggctgctccatcattagctgttcgtttgtggatgac
aataatgtctattactgtgtgggaactgcatatgttatacctgaagaaaatgaaccaacc
aagggccgaatccttgtatttgcagttgaagatggaagtttgcaattaattgtggagaaa
gaaaccaaaggagcagtttattcgttgaatgcattcaatgggaaattgttggctgctatc
aaccagaagattcaattatacaagtggatgtcgcgcgaggatggttcacatgagctgcaa
tctgagtgtggccaccatgggcacatacttgccttgtacactcaaacacgtggtgacttc
attgtggttggcgatctgatgaagtcaatttccttgctggtgtataagcatgaggaaagc
gcgatcgaagagcgtgctagggattacaatgcaaactggatgactgcagttgagatgctt
gatgatgaagtctatgttggggcggagaatggctataacttattcaccgtgcgcaagaac
agtgatgctgccacagatgacgaaagggccaagcttgaggtcgttggggagtaccatctc
ggagagtttgtgaacagattccgccatggttcactcgtgatgcgccttccagactcagag
atagggaagattcctacggtcatctttggcacaataaacggggtcattggcattatcgcc
tccctcccgcatgaccattacaccttccttgagaagttccagtccactcttgtcaagtac
ataaagggagttggaaacatgagccatgagcaatggcggtcgttccataacgacaagaag
acagcggaggcacggaacttccttgatggtgacctgatcgagtcgttccttgaccttagc
cggagcaagatggaggtggtgtccaaggctatgggcgtttcggtggaggatctgtccaag
attgtggaagagctgacgaggcttcactag

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