Zea mays (maize): 103635427
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Entry
103635427 CDS
T01088
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
zma
Zea mays (maize)
Pathway
zma03420
Nucleotide excision repair
zma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103635427
09124 Replication and repair
03420 Nucleotide excision repair
103635427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zma04121
]
103635427
03400 DNA repair and recombination proteins [BR:
zma03400
]
103635427
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
103635427
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103635427
TCR (transcription coupled repair) factors
Cul4-CSA complex
103635427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
RecG_wedge
Motif
Other DBs
NCBI-GeneID:
103635427
NCBI-ProteinID:
XP_020398909
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All DBs
Position
8:79310160..79332214
Genome browser
AA seq
1089 aa
AA seq
DB search
MNVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNETQDFLFIATERYKFCVLQWDTEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL
YQDNKDVRHVKTYEVALKDKDFIEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC
NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE
TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVIDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSREL
VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNP
IGEHLEYSSLAAVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFVDD
NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES
AIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERAKLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGKIPTVIFGTINGVIGIIASLPHDHYTFLEKFQSTLVKY
IKGVGNMSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEVVSKAMGVSVEDLSK
IVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtggaactacgtcgtcacggcgcacaagcccacaagcgtcagccattcctgc
gtcggcaactttaccagccccaaccagctcaacctcattatcgcgaaatgcacccggatc
gagatccatttgcttacccctcagggccttcagccgatgcttgatgtgcctatatatggg
agaattgcaacgattgagctcttccggcctcataatgagactcaggattttcttttcatt
gctacggagaggtacaaattctgtgttctgcaatgggacacagaaaaatcagagctaatc
accagagccatgggtgacgtttctgatcgcattggccgccctactgacaatggacagatt
ggaatcatcgaccctgactgtagactcattggtcttcatctctatgacggcttatttaag
gttataccatttgacaacaaagggcagctgaaggaagctttcaatatcagactggaagaa
cttcaagtactggacatcaaatttctgcatggttgtgttaaacctacaattgttgtcctc
taccaggataataaagatgtgaggcatgttaagacttatgaagttgcactgaaggacaaa
gattttattgagggcccttggtctcagaataatgtagacaatggtgctggtttgttgata
cctgtaccagctccacttggtggtgtgataataattggcgaggagcaaatagtttactgc
aatgccaattctacatttaaagcaataccaataaaacaatccattattagagcttatgga
cgggttgacccagatggttctcgatatttacttggtgataatactggaattctgcattta
cttgtccttacccatgaacgagaaagggttactggtttgaaaattgaatacctgggggag
acttcgattgcatcatcgatttcatatcttgataatggcgttgtttatgttggttcacgg
tttggcgattcacagctggtgaagctgaacctccaagctgatgcaagtggttcatttgtt
gaaattctcgaacggtatgttaatcttggaccgattgtggacttctgcgtgattgacctt
gataggcagggtcaaggtcaggtggtcacttgttctggggcatttaaagatggttccctt
cgggtggttcggaatggtatagggattaatgagcaggcttcagtagaactccaaggcata
aagggattatggtcattgaaatcttctttcaatgatccatatgacatgtaccttgttgtg
agctttataagtgagacacgattcttggcaatgaacatggaagatgaacttgaagagacc
gagatagaggggtttgatgcacaaactcagaccctgttttgtcaaaatgcgatcaatgac
cttcttatacaggttactgctaattcggttcgattagtcagttgtacctcccgggagcta
gtggatcagtggaatgcaccagcaggattctcagtcaatgttgcttcagctaatgccagt
caggttctgttggcaaccggtggtggccatcttgtttacctagaaattagggatgctaaa
cttgttgaagtgaagcatgcacagttagaacatgagatttcttgtcttgatttgaaccca
attggagagcatctagagtatagttccctagctgctgttgggatgtggacagatataagt
gttagaatattttcacttccagatcttgtattaataaggaaagaaaatttgggtggagaa
attgttcctcggtctgttctgctgtgcaccttggagggggtttcgtatttactttgtgct
cttggggatggtaatctgttcagttttctgctgaatgcaagcacaggtgaactgactgat
agaaaaaaggttaccctcgggacccaaccaatcagccttcgtacattctcatcaaagggt
accacccacgtgtttgcttcatcagataggccaactgtcatctatagcagcaataagaag
cttctctatagcaatgtaaatttgaaagaggttaatcatatgtgccctttcaatacagcc
gcttttccagacagtcttgcaattgctaaagagggtgagctttcaattggaactattgat
gatatccagaagcttcatatccgcacaatcccccttaatgaacaagcacgccgcatttgc
caccaggagcaatcaaagacactagcattttgcagtttcaagtacaaccagagtgtggag
gaaagtgagactcacttaatacgtctgctagatcatcagacttttgagtccctgtgtgtg
tatcctctagaccagtatgaatgtggctgctccatcattagctgttcgtttgtggatgac
aataatgtctattactgtgtgggaactgcatatgttatacctgaagaaaatgaaccaacc
aagggccgaatccttgtatttgcagttgaagatggaagtttgcaattaattgtggagaaa
gaaaccaaaggagcagtttattcgttgaatgcattcaatgggaaattgttggctgctatc
aaccagaagattcaattatacaagtggatgtcgcgcgaggatggttcacatgagctgcaa
tctgagtgtggccaccatgggcacatacttgccttgtacactcaaacacgtggtgacttc
attgtggttggcgatctgatgaagtcaatttccttgctggtgtataagcatgaggaaagc
gcgatcgaagagcgtgctagggattacaatgcaaactggatgactgcagttgagatgctt
gatgatgaagtctatgttggggcggagaatggctataacttattcaccgtgcgcaagaac
agtgatgctgccacagatgacgaaagggccaagcttgaggtcgttggggagtaccatctc
ggagagtttgtgaacagattccgccatggttcactcgtgatgcgccttccagactcagag
atagggaagattcctacggtcatctttggcacaataaacggggtcattggcattatcgcc
tccctcccgcatgaccattacaccttccttgagaagttccagtccactcttgtcaagtac
ataaagggagttggaaacatgagccatgagcaatggcggtcgttccataacgacaagaag
acagcggaggcacggaacttccttgatggtgacctgatcgagtcgttccttgaccttagc
cggagcaagatggaggtggtgtccaaggctatgggcgtttcggtggaggatctgtccaag
attgtggaagagctgacgaggcttcactag
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integrated database retrieval system