Zea mays (maize): 103635858
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Entry
103635858 CDS
T01088
Name
(RefSeq) formin-like protein 5 isoform X2
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103635858
09122 Translation
03013 Nucleocytoplasmic transport
103635858
03015 mRNA surveillance pathway
103635858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103635858
03041 Spliceosome [BR:
zma03041
]
103635858
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103635858
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
103635858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
103635858
NCBI-ProteinID:
XP_008656461
UniProt:
A0A804LL41
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Position
1:complement(66301547..66306795)
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AA seq
714 aa
AA seq
DB search
MSSYPVLNNRPIDQWRVTDLKDELRKRKLPVKGLKEELVKRLSDSIQSEREADEADEDVG
VNVDDQLPDANAIEENTVTVTEVHQETVVDVTHQVEVPTTEVGQESIISPTRGPPSVDVE
EASTTKGKVPESVARGNLTFEEVQVHTKSTNEPLHEKTTDVDTNDAVDVNSDLIPAEVKF
GATEASKIEEQDFPPAPVDDLTSDSTGPLGTDVVTAATSVSDEGEKLAPKDASGNKVSMH
DEEQNNSDTMNEDCKPIISQSNNQVPEVSQDLGSQIKCESISTDNLSTNKKNNIEGNLNA
NNFDLELEIQPKMVEPSSGITPLGGDLQPLDDDKELVKNQTSLEDIDSTDNVDSYKKDSP
EGGSPEKLNLDRSSGDESMEEDTVEIKQDESNMKSDDLGGKNEFNSEDVKEVILPDSVVE
ASKEAMAEEKSAASTEKRKLEAEEGVASTEPIKRQRRWTADIAKVSGRQALSQTGPETPK
ESFQPAFKRSFGRSDSTASVDSPKERIVPPSEKPPTTSLRIDRFVRPFTLKAVQEFLGKT
GSVQDFWMDHIKTHCYVTFSSVDEAVATRDAVYNLQWPPNNGNKLVAEFVDPQEVKLKVD
PPPPPAAPVSPAAATRAPPVQHTQTNQSVPRQAAAPKEELPPPPPPPLAKPPMADLTPLG
RERLPPTPKKPEPPVVTLDDLFKKTQSSPRIYYLPLSEEEVAAKLAAQGKGKKG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatatcctgttctaaacaaccgaccaatcgatcagtggagagttactgatctg
aaggatgagctccgtaaaaggaagcttcctgttaaaggtttgaaagaggaactcgtcaag
agactctctgactccattcagagtgaaagagaagctgacgaagctgatgaggatgtggga
gtgaatgtggatgatcagttgcctgatgccaatgctattgaggaaaatacagttactgtt
acagaagttcatcaggaaactgtggttgatgtcactcatcaagttgaagttcctacaacc
gaagttggtcaagaatccataatttctcccactagaggcccccccagtgttgatgttgaa
gaggcctcaacaaccaaaggaaaagtacctgaatcagttgctcgaggaaatttgacattt
gaagaagtgcaagtgcatactaaaagtactaatgagcctcttcatgagaagaccacagat
gttgacaccaatgatgcagtcgatgtgaattcagacttgatccctgctgaagtcaagttt
ggtgctacagaagcaagcaaaattgaagaacaggattttcccccagcgcctgtagatgac
ttaacttcagattctactggtcctttgggtactgatgttgtcacagctgcaacttcagtt
agcgacgaaggggagaaactggcacccaaggatgcttcgggtaacaaggtgtcaatgcat
gatgaagagcagaataattctgataccatgaacgaggactgcaagcccatcatatcacaa
tcaaataatcaggtacccgaggttagtcaagatttagggtctcaaattaagtgtgagtcg
atttctactgataatctatcaactaacaaaaagaataatatagaaggtaatttaaatgct
aataattttgatttagaactagagattcagccgaagatggtcgaaccatcatccggcatt
actccattaggtggagatttgcagccattggatgatgacaaagagctggttaagaaccag
acatctttggaagacatagattccacagataatgtggactcatacaagaaagatagtcct
gaaggtggatctccagagaaattaaatctagacaggagttcaggtgatgaatcaatggag
gaggatactgtggaaattaaacaagatgagtccaatatgaaatctgatgatctcggagga
aagaatgagtttaactcagaagatgtgaaagaggtgatcctccctgattctgttgttgag
gcttccaaggaggctatggctgaagaaaagtcagcagcttcaacagaaaagaggaaactt
gaagctgaagaaggtgttgcaagcactgaaccaatcaagcgacaacgtcggtggactgca
gatattgccaaagtttcagggagacaagcattgagtcaaactggtcctgaaactcctaag
gaaagttttcagcctgctttcaaacgatcttttgggaggtctgattcaacagccagtgta
gattctcctaaggagcggattgtaccaccttccgagaaacctcccacaacttctttgaga
attgaccgatttgtacgcccatttaccctgaaagctgtgcaggagtttcttggtaaaact
ggatctgtacaagacttctggatggaccatatcaagactcattgctatgttacattttct
tcggtggatgaagctgtggctactagggatgctgtttacaacctacagtggcccccaaac
aatggcaataagttggttgccgagtttgttgatcctcaggaagtgaagctcaaggtcgac
cctcctcccccgccagctgctcctgttagcccagctgctgccacaagggcacctcctgtt
caacatactcagacaaatcaaagtgtgccacgccaggctgctgcaccaaaggaggaactg
ccacctccacctccccctccccttgctaagccccctatggctgacctgacgcctttagga
agagagaggcttccacccactccaaaaaagccggagcctcctgtcgtgacacttgacgat
ctctttaagaagacacagtcctctccgaggatctattatcttcctttatcagaagaggag
gtggcagccaagctcgccgcacagggcaaaggaaaaaagggatag
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