Zea mays (maize): 103636014
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Entry
103636014 CDS
T01088
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103636014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103636014
Spliceosome [BR:
zma03041
]
Complex C
Other components
Step II factors
103636014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
103636014
NCBI-ProteinID:
XP_008656603
UniProt:
A0A804LLH7
LinkDB
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Position
1:69560070..69564132
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AA seq
572 aa
AA seq
DB search
MDLLQSSYAPDAASSPEDSAAASSPESSPLRLPSKSAAPAVDDTALALSSAASAARPLDP
SLHLVAFNPTADQLWAPILGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYAADPSGLHIVGDAHPQAPEPDTVYNLAPSEHKRRRLLAKADNQEEPAPPEAKNPAS
EEWVLHNKQSPWAGKKEAPPAELTDEQRQYAEAHAAKKAEKEARAEGKSERAEVVVKTTF
HGKEEKDYQGRSWITPPKDAKATNDHCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSA
SMDCKIKIWDVLGSRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLR
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcctcttacgcgccggacgccgcctcgtccccggaggactcggcg
gccgcgtcctcgccggagtcctcgccgctccgccttccgtccaagtccgccgcccccgcc
gtcgacgacaccgcgctcgcgctctcctccgccgcgtccgccgcccgcccgctcgacccc
tcgctccacctcgtcgccttcaaccccaccgctgaccagctctgggcgcccatcctaggg
ccccagcacccccacgccccaatctcctccgcctcaggcaatcgcaaccacaagctcggc
cacgtcgaggacgccgcggtcctgcccttcctattcgacgagcagtacaacaccttccac
cgcttcggttacgctgccgacccctccggcctccacatcgtcggcgacgcccatccccag
gcgcctgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctc
ctggccaaggcggacaaccaggaggagcccgcccctccggaggccaagaaccccgcctcc
gaggaatgggtcctccacaacaagcagagtccctgggctgggaagaaggaagcgcctccc
gcggagctcaccgacgagcagaggcagtatgcggaggcgcacgctgccaagaaggccgag
aaggaggctcgcgccgaaggaaagagcgagagggcagaggttgtggtcaagaccaccttc
cacggcaaggaggagaaggactaccagggacgctcctggatcacgccgcccaaggacgcc
aaggccaccaacgaccactgctacatcccaaagaggtgtgtccacgagtgggtcggccac
accaagggggtctcggccatcaggttttttccaaagtatggacatttgctgctgtctgca
agtatggattgcaagattaaaatctgggatgtgcttgggtcacggacatgtatgcggact
tatatggggcactcaaaggccgtaagggatatatcattctctaatgatgggactaaattc
ttgagtgctgggtatgacaggaatatacagtactgggatactgagacagggcaggtgatc
tcgaccttctcaaccgggaaggtcccatatgttgtgaagctcaatcctgatgaggataag
cagcatattctccttgccggaatgagtgataaaaagattgtgcaatgggatatgaagtca
gggcagattacacaagagtatgatcagcatttaggggctgtgaacaccataacttttgtg
gataacaacaggagatttgtgacctcgagtgatgacaagtctcttcgtgtgtgggagttt
ggcatccctgtggtgattaagtatatcagtgagccgcacatgcactcaatgccatcaatt
gcactgcatcccaactcaaattggctggcagcacagagcttggacaatcagatactgata
tacagcaccaaggagaggtttcagcttaataagaagaagagatttgccggacatattgtg
gcaggttatgcttgtcaagtgaacttctcacctgatgggaggtttgtgatgtctggtgat
ggtgagggtagctgctggttctgggactggaaaagctgcaggagatttaagactttgagg
tgccacaacggagtttgcattggatgtgagtggcatccattggaaactagcaaggttgca
acctgtggatgggatggtgtaattaaatactgggattga
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