Zea mays (maize): 103636271
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Entry
103636271 CDS
T01088
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
zma
Zea mays (maize)
Pathway
zma03430
Mismatch repair
zma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103636271
03460 Fanconi anemia pathway
103636271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103636271
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103636271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103636271
NCBI-ProteinID:
XP_008656853
UniProt:
K7W1B0
LinkDB
All DBs
Position
8:complement(163579123..163586475)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVDDPSPRAGGGSGVDPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTV
SVTVKDGGLKLIQVSDDGYGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASM
TYVGHVTVTTITEGQLHGYRVCYKDGVMENEPKPCAAVKGTQIMVENLFYNMVARRKTLQ
NSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDTIRNVYGASVVRD
LIEIEVSDEDAGDAVFKMDGYISNANYVAKKIMMILFINDRLVECTALKRAIEFVYSATL
PQASKPFIYMSINLPSEHVDVNIHPTKKEVSLLNQERVIETIKNTIEEKLRNCNTTRIFQ
TQAVNSALTQVYTQKDKGTEVKMAPGVKSQKAPVSQMVRTDPRNPSGSLHAYWHGQSSKL
ENKYDLVSVRNVVRSRRNPKDAGDLSSRHELLMEIDSHCHPGLLEVIKNCTYVGLADEVS
ALIQYNTHLYLVNVVNVSKELMYQQALCRFGNFNAIQLSEPAPLQELLLMALKDDESIGD
ENDEEKLEIAEANSKILKENAEMINEYFSIHVDHDGNLTRLPVVLDQYTPDMDRLPEFVL
TMGNDVTWDDEKECFRTAAAAIGNFYALHPPILPNPSGSGVQVYKKNKACMASGEHVDST
DEDDIDHELLAEAETAWSQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQIASLEKLYRI
FERC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgatgacccctcaccgcgcgccggcggaggcagcggcgtggacccgccccgc
atccggcggctggaggaatcggtggtgaaccgcatcgcggcgggggaggtgatccagcgc
ccgtcgtcggcggtcaaggagctcgtcgagaacagcctcgacgccggcgcgtccacagtc
tccgtcaccgtcaaggatggaggactcaagctcatacaggtttccgacgacggctacggc
attcggtttgaggatttgccaatactgtgtgaaaggcatactacctcaaagttatctgca
tatgaggatttacagaccataaaatctatgggctttagaggggaggccctggccagtatg
acttatgttggccatgttactgtgacaacaataacagagggccaacttcatggctaccgt
gtttgttataaagatggagtaatggagaacgagccaaaaccctgtgctgcagttaaagga
actcaaatcatggttgaaaatttattttacaatatggtagctcgtagaaaaacattgcag
aactccaatgatgactacccaaagattgtagatttcattagtcgttttgcagtccatcac
atcaatgtgaacttctcctgcagaaagcatggagccaatagagcagatgttcatagttcg
agcacatcttctagactagatactattaggaatgtctatggggcttctgttgttcgtgat
ctgattgaaatagaagtttcagatgaggatgctggagatgcagtcttcaagatggatggt
tatatatcaaatgcaaattatgtggcaaagaaaatcatgatgatccttttcataaatgat
aggcttgtagagtgtactgctttaaaaagggcaattgaatttgtgtactctgcaacgttg
ccacaagcatccaaacccttcatatacatgtccatcaatcttccatcagaacatgtggat
gtcaatatacacccaaccaaaaaagaggttagcctcttgaatcaagagcgtgttattgaa
actataaaaaataccattgaggaaaaactgaggaattgtaataccacaaggatattccaa
actcaggcagtaaactcagcacttactcaagtttacacgcagaaggacaagggtactgag
gtcaaaatggcccctggagtgaaatctcaaaaggctcctgtgagccaaatggtcagaact
gatccacgcaatccatctggaagcttgcacgcttactggcatgggcaatcttcaaaactt
gaaaataaatatgaccttgtttctgtaagaaatgttgtaagatcaaggaggaatccaaag
gatgctggtgatttatctagccgtcatgagcttcttatggaaatagattctcactgccat
cctggtcttttagaggttattaagaattgcacatatgttggcctggctgatgaagtttcc
gctttgatacaatacaatactcacttataccttgtcaatgttgtaaatgttagtaaagaa
ctcatgtaccagcaagctctgtgccgttttggaaacttcaatgcgatccagcttagtgaa
ccagctcctcttcaggagctgctgctgatggcactgaaagatgatgaatcaatcggtgat
gaaaatgacgaggagaaactggagattgcagaggcaaactcgaaaatactgaaagaaaac
gctgagatgattaatgagtacttctctattcatgttgatcacgatgggaacttgaccagg
cttccagttgtacttgatcagtacacccctgatatggaccgtctcccagaatttgttttg
actatggggaatgatgttacctgggatgatgagaaagagtgcttcagaacggcagcagct
gctattgggaacttctacgcactccatcctcccatccttccaaatccatcggggagtggt
gttcaggtgtacaagaaaaataaagcttgcatggcgagtggtgaacatgttgatagtaca
gatgaagatgacattgatcacgaactacttgcggaagcagaaacagcatggtcccaacgt
gagtggaccattcaacatgtcttgtttccatccatgcgacttttcctcaagcccccaaag
tcaatggcaacagatggaacctttgttcagattgcctctctggagaaactttacaggatt
tttgagagatgttag
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