Zea mays (maize): 103637587
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Entry
103637587 CDS
T01088
Name
(RefSeq) uncharacterized WD repeat-containing protein alr3466-like
KO
K12880
THO complex subunit 3
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103637587
09122 Translation
03013 Nucleocytoplasmic transport
103637587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103637587
03041 Spliceosome [BR:
zma03041
]
103637587
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103637587
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
103637587
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103637587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_ELP1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_WDR5
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_1st
CFAP43_N
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
103637587
NCBI-ProteinID:
XP_020402006
LinkDB
All DBs
Position
1:84341007..84347028
Genome browser
AA seq
283 aa
AA seq
DB search
MRSMAEEQIEEASMAATVAVRTHSLTRCLQTHFSRAPPRASVSASSMASLTGSALSFARP
VKTKMAEWNPEKDLLAMVTDDSKVLLHRFNWQRLWTISPGKCITSICWSPDGKIIALGTE
AGLILLHDVETKMAEWNPEKDLLAMVTDDSKVLLHRFNWQRLWTISPGKCITSICWSPDG
KIIALGTEAGLILLHDVETKMAEWNPEKDLLAMVTDDSKVLLHRFNWQRLWTISPGKCIT
SICWSPDGKIIALGTEAGLILLHDVEVCIWMMIKIVGVYCIFV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcatggcggaggagcagatcgaagaggcgtccatggccgcgacggtagcggtc
cgcacccactcactcacccgttgcctccaaactcatttctcccgagcgccgccgcgagcc
tccgtttcagcttcgtccatggcttccctcaccggatctgctctctcctttgcgaggccc
gtcaagacaaaaatggcagaatggaatccagagaaggatctgcttgctatggttactgat
gactccaaggttcttctccatcgcttcaattggcaaaggctttggacaatctctccaggg
aagtgcatcacatcaatttgttggagccctgatggtaaaataatagcacttggcacagaa
gctggcttgattcttttgcatgatgtggagacaaaaatggcagaatggaatccagagaag
gatctgcttgctatggttactgatgactccaaggttcttctccatcgcttcaattggcaa
aggctttggacaatctctccagggaagtgcatcacatcaatttgttggagccctgatggt
aaaataatagcacttggcacagaagctggcttgattcttttgcatgatgtggagacaaaa
atggcagaatggaatccagagaaggatctgcttgctatggttactgatgactccaaggtt
cttctccatcgcttcaattggcaaaggctttggacaatctctccagggaagtgcatcaca
tcaatttgttggagccctgatggtaaaataatagcacttggcacagaagctggcttgatt
cttttgcatgatgtggaggtgtgtatctggatgatgataaaaattgtcggtgtctattgt
atctttgtatga
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