Zea mays (maize): 103637697
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Entry
103637697 CDS
T01088
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
zma
Zea mays (maize)
Pathway
zma03030
DNA replication
zma03410
Base excision repair
zma03420
Nucleotide excision repair
zma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103637697
03410 Base excision repair
103637697
03420 Nucleotide excision repair
103637697
03430 Mismatch repair
103637697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zma03032
]
103637697
03036 Chromosome and associated proteins [BR:
zma03036
]
103637697
03400 DNA repair and recombination proteins [BR:
zma03400
]
103637697
DNA replication proteins [BR:
zma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103637697
DNA Replication Termination Factors
ELG1-RFC complex
103637697
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103637697
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103637697
Check point factors
HRAD17(Rad24)-RFC complex
103637697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
RuvB_N
Motif
Other DBs
NCBI-GeneID:
103637697
NCBI-ProteinID:
XP_008658588
UniProt:
A0A804LNP1
LinkDB
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Position
1:100470232..100474366
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AA seq
623 aa
AA seq
DB search
MPCQCPDTPPRQPPALWLPSYITTDMETPSPGATLSAVIAEDRRREARRRQGGFGQGGLL
PYLVPACGRPAGQRGGRPLHSELMVKLHRWGATFLPKGGGAVARELEEPCRAPSPPPRPR
PSFTPAASAAEPEVVPRHEAPAVSVVPTTGPSREREEPAAGSEAIAEADMSAGESAGSSD
HQATPVVTVAGGSGGTWLRASPKTRARSPSLQTDSDESPRPLADSAALPVVADDKYVWAD
KYRPNVLNEFICNKTVAAELYQLVVAHQCRHFIFEGPPAVGKRSMVLALIRDAFGPHDLK
IEEQTKRFELKGEIRKHIDVRVKTSEHHVEVSLADLHGYEKYIITTLLSESIPSPSSVCD
HTNCRVIVIHDADKLSFDLQHYIGWFLGRYAGCNKIIFCCSDASNLEAIKHLCKVVTLQP
PSFDEIINVLEYIATQESIDLPRDLARRITVGANNNLRQTIRSFEATWKANYPFIDGQVI
LTGWEEEISNVASNIMEEPSPKQLFLVRGKIRKMIEHDVSPHFIFSHLVAELKRDKDEDF
QHSVDELASDLNHFQDSKGQCKGNKSREANFKTRYMNIEGFTAEAHDHGETIQCFIKIEE
FTVRFLSFYRSLVAKNSNRGSAQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccatgccagtgcccagacacaccgccgcgtcaacctcccgctctctggctcccaagt
tacatcaccacggacatggaaaccccctcgccgggcgccacgctctccgcggtgatcgcc
gaggaccgccgccgggaggctcgccgccgccaggggggcttcgggcagggcggtctcctc
ccgtacctcgtcccggcttgcgggcgtccggccggccagaggggcggcaggccgctgcac
tctgagctcatggtaaaactgcaccgctggggcgccactttcctgcccaagggcggcggc
gccgtcgcgcgcgaactcgaggagccgtgccgcgcgccaagcccgccgccacggcctaga
ccatcattcacaccggctgcatcggcggcggagccggaggtggtgccgcgccacgaggcg
cccgccgtgagtgtcgtccccacgacggggccttcgagggagagagaggagccggcggcg
ggatccgaagccattgccgaagcggacatgtccgccggcgagagcgcggggagcagcgac
caccaggcgacgccggtcgttaccgtcgcgggaggaagtgggggaacctggctcagagct
tcgcccaagacgagagcgaggtctccgtcactgcagacggacagcgacgagtcccctcgg
cccctcgccgactccgccgcattgcccgtggtggccgacgacaagtacgtgtgggcggac
aagtaccggcccaatgtcctcaacgagttcatctgcaacaagaccgtcgccgccgagctc
taccagctggttgttgcacaccagtgcagacatttcatctttgaaggcccgccggcggtt
gggaagagaagcatggtactggcacttataagggatgcttttggcccccatgatctcaag
atagaggaacagacaaagagatttgagctgaagggagaaattagaaagcacatcgatgtc
agagtgaagacctctgagcatcatgtggaggtgagcttggctgatttacatggctacgag
aagtacatcataaccactctgttgagtgaatccatcccatcaccaagctcagtttgtgac
catactaactgcagagtgattgttatccatgatgctgataagctctcgtttgatcttcaa
cattatattggttggtttttggggaggtatgccgggtgcaacaaaatcattttctgctgt
tctgatgcttctaatcttgaagccattaagcatctctgtaaggttgtgactcttcaacca
ccttcatttgacgagataataaatgttctagagtacattgcaacgcaagagagcattgat
ttgcctcgtgatcttgctagaagaattacagtcggcgcaaacaataatctccgacagaca
atacgctcttttgaagctacttggaaggcaaactacccgttcatagacggtcaagttatt
ttgacaggatgggaagaagaaatctctaatgtggccagcaatatcatggaggagccaagt
ccaaagcaactgtttcttgtccggggaaagatcagaaaaatgattgaacatgatgtgtca
cctcatttcattttctctcacctggtcgcggaactgaaaagggacaaggatgaagacttc
cagcacagcgttgatgaattggcctcggacttgaaccattttcaagattccaaagggcag
tgcaaaggaaacaaatcacgggaggcaaactttaaaacgaggtatatgaacatagaaggt
tttaccgctgaggctcatgaccatggtgaaaccatccaatgcttcataaaaattgaagaa
ttcaccgtaaggttcctgagcttctacagatctctagtggcaaaaaactcgaatagaggc
agtgctcaatga
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