Zea mays (maize): 103638287
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Entry
103638287 CDS
T01088
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103638287
03400 DNA repair and recombination proteins [BR:
zma03400
]
103638287
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
103638287
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
103638287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
HEAT_GCN1_C
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
103638287
NCBI-ProteinID:
XP_008659464
LinkDB
All DBs
Position
9:complement(40709896..40729366)
Genome browser
AA seq
1835 aa
AA seq
DB search
MAAAEQLKELGEKLQAVAPAPADELAKLLEKAVECLRGIEQSPGSSVMEAIQPSLKAVTR
EELLKHEDDNVKVLLATCFCEITRITAPDAPYNDDILRDIFYLIVGTFGGLSDVNSQSFG
RRVAILETVARYRACVVMLDLECDDLITNMFQTFLGVVSDSHEENIVKSMQAIMILIIDE
SEDVQESLLRVLLSALGQKKTGAAMSARKLARSVIEHSATKLEPYIKKFLTSSWAGNGSS
SNDQIDHQGVVFDLYQCAPKVLKAIVPYITGELLADEVDNRSKSVELLGEIFSLPGASIV
ECFKTLFTEFLKRLTDRVVEIRISVVEYLKRCLISNPSRAEAPEIIKALCDRLLDYEENV
RKGVVAALCDVATHSPYAIPIDTIKVVAERVRDKSQAVKCYTMERLADIYKLYCQRDSDS
STNSDDFEWIPGKILRCLYDKEFRPESIDSILSGSLFSPEYQMKGRVKHWITAATYFDKV
EMKALEQILLHKQRLQQEMLKYISLREPSQEDAPDLQKRIFGCFRNISRLFSDSAKCEEN
LNMLHQLKDADFWKIFTSLLNCSTTFEKAWSLRAELLKILGENHVLYNFVGTLTMRCSYL
LVNKEYAKEILAEASAQKTSGNTKLISSCMNLLTAISSFFPSLLAGLEEDIVELLKEDNE
VLKEGIAHVLSKAGVNIREQLASTSSLDLLLERLCLEGTRRQAKYSVHALAAITKDDGLM
SLSVLYKRLVDLLEEKKVNIPSILQSLGCIAQIAMPIFETRKEEILSFIIKKILDCNDDM
VQNSSNKSEWGDSTHNCLLKIYGIKTLVKSYIPCKDAHAQPGIEKLIDILKNILTYGDIS
PNMVSSAADKAHLRLAAAKAVLRLSKQWDHKVPVDVFYLTLRISQDDFPQVRKLFLCKVL
QYIKERALDAKYACAFMFGVNDYHGPQLEEFKYNLTEVVQICQQVKMRQLSVQADMNLLT
AYPEYIISFLVHALAHDPSSPDIEEHENVKAFGPTYWRLYLILSILLGEEGLQHSVPGMK
KDSFTTIISIFKSIKSSQDVVDGNKNKTLWAICDLGTLIAKRLCQDQTSLSEAQTVPLPP
QLYAPLQDNQNENSVESYGQIWPGCEKVLAHFEAVMTANMDKVESPKHKMLIDMTDEFGN
EVPLGKIVKLLKLRGEKKAEKKQKAPSSSSVNAENDDDVLGLVREINLSNQEDLEELQKG
KPKKRQTDTKNSNKKPLDFSSPKRKRSISKSRPHSAKGSKNSDDRLIHTPNTERTSISLE
TKLKEKNRDDSIDTELLVSPSIRTPVSKGNKGAKRSHIDILSSVPKKSADAESTKRTVEP
RSLNGSLKSQKSKPISGLVQCSTQDSSGTDLVGHRIKVWWPLDKRFYEGTVQSYDSSKKK
HTVLYDDGDVEVLILAKEKWILIESNDSSVKKQKKDLGTNQGRAWEGTSSNKSPPSQPKS
KKRSLPPKKKGQPNDKRRKTAERNNSVEEEGIGAGDNDSDSSSPLAHSDVDKDVNSVGHM
EEVIVSLAEKEKTRKDSKGMEMKEKGGKDSKDVKIKEKAGKESKDVEMKEKIGKESKDVK
IKEKAGKESKDAEVKEKTGKDSKDVETKDKAEKDSKDVEMEEEAGKHSKDVNMKEKAGKE
SKDVEMKEKTGKESKYAKMKEKAGKESKDLEVKEKAGKDSKDVELKHEAGKDSKDVKMKE
KAGKESKDSEMKEKIGKESKDVKMKDKSVKESKDVEMKEKPGKDSKDVKTKEKAGKESKD
LEVKGEAGKESKHGEAKKPGKDSKDVKTKENAAGKESKDAEVKEKAVKDPKDVEMEGMAG
KEPKDVEKLDGHTLSNEESDNDTLSVWKKRTAKAT
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggagcagctgaaggagctgggggagaagctgcaggcggtggcgccggct
cctgcggacgaactcgccaagctcctcgagaaagctgtggaatgcttacgtggaatagag
caatcaccggggtcctcagtgatggaagctattcaaccaagtcttaaggctgttaccaga
gaagaattgctgaagcatgaggatgacaatgtcaaagttctcttggcaacatgtttctgt
gaaattacaagaataactgcacctgatgctccctacaacgatgacattttaagggatata
ttctatctgattgtgggtacatttggcggactcagtgatgttaatagtcaatcctttggc
aggagagttgctattcttgaaacagttgctagataccgagcatgtgttgtgatgttagat
cttgaatgtgatgatcttattacaaacatgtttcaaacatttttaggagttgtcagcgac
agtcatgaagaaaacattgtaaagtcaatgcaggcaataatgatccttattatagatgag
agtgaagatgtacaggagagtcttctacgtgtactgctgtcagcattggggcagaaaaaa
actggtgctgcaatgtctgctcgtaaacttgctcgcagtgtcattgagcattccgctaca
aagcttgaaccttacataaagaagtttctaacgtcatcatgggctgggaatggcagttct
tctaatgatcaaattgatcaccagggagttgtatttgatttatatcagtgtgctccgaag
gttcttaaggcgatcgtgccgtatattactggggagctactggcagatgaagtagataac
aggtctaagtcagttgaattacttggggaaattttttccttacctggagcctctattgtg
gaatgtttcaagactcttttcacagaattcctcaagagactgactgatagagttgttgaa
atccgtatttctgtggttgagtatttgaagagatgtctaatatcaaatccttccagagct
gaagctcctgaaatcatcaaggcactttgtgacagattgttggattatgaagaaaatgtg
cggaagggagtggtggctgcactttgtgatgtagctacccattctccttatgctattcca
attgatacaattaaagtagtagcagagcgtgtccgcgataaatcgcaggctgtgaagtgc
tataccatggagaggttggcagatatttacaagctgtactgccagagggattctgatagc
tcaacaaattctgatgattttgagtggatacctggaaaaatattaagatgtctttatgac
aaagagtttaggccagagtcaatcgactctattttgagtggttcattgttctcaccagag
taccaaatgaagggaagagtgaaacattggattacagctgcgacatacttcgataaagtt
gagatgaaagcccttgaacaaattctcctgcacaagcaaagactgcaacaagaaatgctg
aaatacatatcgcttcgggaaccaagccaggaagatgcccctgatctgcaaaaaagaatc
tttggatgtttccggaacatctctcgcttatttagtgactccgcgaagtgcgaggagaac
ttgaacatgcttcatcagctaaaagatgccgatttctggaaaatattcactagcctgctt
aattgttcaactacatttgagaaggcttggtctcttcgggcagagttgcttaagatactt
ggtgaaaaccatgtgctttataattttgttggcacattaacaatgagatgttcatattta
cttgtaaacaaggagtatgcaaaagagatccttgcagaagcttctgcacagaagacttct
gggaatacaaaactcatctcatcgtgcatgaatcttctaacggcaatatctagtttcttt
ccatctcttttggctggacttgaagaagacattgttgaactcctgaaagaggataatgaa
gtgcttaaagagggtattgcacatgtgttatcaaaggctggtgtcaatattcgtgaacag
ttagcctcaacaagttcccttgatcttctattagagcgtttatgcttagagggtacgcgg
aggcaggctaaatactctgttcatgcacttgctgccattacaaaagatgatggtcttatg
tcactatctgttctttacaagaggcttgtggatttgttggaagagaagaaagtgaatata
ccatctatcttgcaatctttgggttgtatagcccaaatagcgatgccgatttttgaaaca
cggaaagaagagatattaagtttcataattaaaaaaattcttgactgcaatgatgatatg
gttcaaaattcttctaataaatctgaatggggtgatagtacacataattgtttgctgaag
atttatggcatcaaaactttggtgaagagctatataccttgcaaggatgctcatgcacag
ccaggaatagagaagttaattgatattctgaagaatattcttacctatggtgatatatct
ccaaatatggtctcaagtgctgctgataaggcccatttgaggcttgcagcagcaaaagct
gttctccgcttatcaaaacaatgggaccataaagtgcctgttgatgtattttatttgact
ttgaggatttcacaggacgattttcctcaggtgaggaaattatttctttgtaaagtactt
caatatatcaaggaaagggccttggatgcaaaatatgcttgcgccttcatgtttggtgtt
aacgattatcatggcccacagttagaagagttcaagtacaatctgactgaagtggttcag
atatgccaacaagttaagatgcgccaactttcagtccaagcagatatgaatttgttgacg
gcttacccagaatatataatttcctttttggttcatgcccttgctcatgatccttcatcc
ccggacattgaagaacatgaaaatgtcaaagcatttggtccaacttactggcgactttac
ctgattctttcaatcctcctgggggaagaaggtttgcaacatagtgttccaggcatgaaa
aaggatagcttcactacaataatatctatattcaaaagtatcaaatcttcacaggatgtg
gttgatggaaataagaacaagactctgtgggctatatgtgatcttggtactcttattgca
aagaggctatgccaagaccaaacgagtttatcagaagctcaaaccgttccattgcctccc
caactttatgcaccgcttcaggataaccaaaatgaaaattctgtggagagttatgggcag
atttggccgggatgtgagaaagtactggctcattttgaggctgtaatgactgcaaacatg
gataaggttgaatctcccaaacataagatgcttattgatatgactgatgaatttggaaat
gaagttcctcttgggaaaattgtcaaacttcttaaattgcgaggagaaaagaaggcggag
aaaaagcagaaggcaccatctagtagttcagtaaatgccgagaacgatgatgatgtcctg
ggtttagtaagagaaattaacttgagcaaccaagaagatttggaggaattgcaaaagggc
aagcctaagaagcgccagacagatacaaaaaatagtaacaagaagccacttgatttttct
tcacctaaacgcaaaagatcaatttctaagagtagaccacattcagcaaaaggtagtaaa
aacagtgatgaccgtctaatacatactcctaacacagagaggaccagtatctccttggaa
actaaattgaaggagaaaaacagagatgattcaatcgatacggaactgttagtatctccc
agcattagaacccctgtatctaaaggaaataagggtgctaagagatctcatattgatatt
ttgagcagtgttccaaagaagtctgctgatgcagagagtactaagagaactgttgagccg
agaagtctaaatgggtcactcaaaagtcaaaagtcaaaaccgatttctgggttagtacag
tgctcaacacaggactcaagcggtaccgacttggtaggacaccgaataaaagtttggtgg
cctttggataagcgattttatgaaggtactgttcaatcatacgattcatccaagaaaaaa
catacggtgctatatgatgacggagatgttgaagtgcttatattggctaaagagaagtgg
atattgattgaaagtaatgattcatcagtgaagaagcaaaagaaggatcttgggacaaac
caaggaagagcatgggagggaactagcagcaacaagtctccgcctagccaaccaaagtca
aaaaagaggtccttgcctccaaagaagaaagggcaacccaatgataagcgaagaaagact
gcagaaagaaacaattctgtagaagaggagggtattggagctggtgacaatgattcagat
tcatccagtcctcttgcgcactcagatgttgacaaagatgtaaactctgttggccacatg
gaggaagtaatagttagcttagctgagaaagagaagaccaggaaggactccaaaggcatg
gaaatgaaagagaagggagggaaggactccaaagacgtgaaaataaaagagaaggctggg
aaggagtccaaagacgtggaaatgaaagagaagatagggaaggagtccaaagatgtaaaa
atcaaagaaaaggcagggaaagaatccaaagatgcggaagtgaaagagaagacagggaag
gactccaaagacgtggaaacgaaagacaaggcagagaaagactccaaggacgtggaaatg
gaagaggaggcagggaagcactccaaagacgtgaatatgaaagagaaggcagggaaggag
tccaaagatgtggaaatgaaagagaagacagggaaggaatccaaatatgcaaaaatgaaa
gagaaggcagggaaagaatccaaagatctggaagtgaaagagaaggcagggaaggactcc
aaagacgtggaattgaaacatgaggcagggaaggactccaaagacgtgaaaatgaaagag
aaggcagggaaggagtccaaagactcggaaatgaaagagaagatagggaaggagtccaaa
gatgtaaaaatgaaagataagtcagtgaaagaatccaaagatgtggaaatgaaagagaag
cccgggaaggactcaaaagatgtaaaaacgaaagagaaggcagggaaagagtccaaagac
ctggaagtgaaaggggaggcagggaaagaatccaaacatggcgaagcgaagaagccaggg
aaggactcaaaagatgtaaaaacgaaagagaatgcggcaggcaaagagtcgaaagacgcg
gaagtgaaagaaaaggcagtcaaggacccaaaagatgtggaaatggaagggatggcagga
aaggagcccaaagatgtggaaaagctggatggccatactttgagcaacgaggaatcagac
aacgatactcttagcgtgtggaaaaaacgtacagcaaaagcaacatag
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integrated database retrieval system
