Zea mays (maize): 103639350
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Entry
103639350 CDS
T01088
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
zma
Zea mays (maize)
Pathway
zma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103639350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103639350
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103639350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
zf-RING_13
DUF5679
Motif
Other DBs
NCBI-GeneID:
103639350
NCBI-ProteinID:
XP_008660335
UniProt:
A0A1D6PER1
LinkDB
All DBs
Position
9:148416953..148422753
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AA seq
552 aa
AA seq
DB search
MASNQTNQTLRSEHTAGGGISMGSVAPAELVLKAACERCGAASGLYATSCRHTTLCSDCG
MTLALARGRCTVCSAPVTRLIREYDVRVDTSAEKEKTHYIGRFTTGLPPLSNERSAGNRW
TLRKDVPHGQQLTGNMRDKHYSKMPWILEDETGEHQYQGQTEDPPATYYSLTQKGNDMIA
VQVGSWYNFSKIAQYKQLTLEEAEEKMNRRRSSASGYERWMMKAATNGPDAFSSVVKRLD
DVNRGATNGVHPKKGDRNENGNQSDKVDDKEEEGAARKNRLGLTMKDMGEDYEDSGNDIE
FDLDDEIEKGDDWEHEEIFTDDDEVVDVDIEQRPELADPEAAPPEIKQDDNEDELGCSDN
LSKSGQELKRLLRRAAGENESDVDDKSTYEDDLPSPKPAPKLVPKSEPDDSSPAKPTPSG
HAQSATPSSKSTQKRKSGGGDANISNGAPSKKIKMEHETGTLAVKDENPSYLEPTSKASL
SARRESSPITEEEVRTVLRAISPTTSQDLVSRFKTRLITQEDKKAFLGIVTKISRILKHN
GGRYIVLRHEHM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaccaaacgaaccaaaccctacgtagcgagcacaccgcgggcggcggcata
agcatggggagcgtcgcgcccgccgaactggtcctgaaggcggcgtgcgagcgctgcggt
gcagcgtcgggactctacgcgacgtcgtgccggcacaccacgctctgctccgactgtggc
atgaccttggcgctcgcccgcgggcgttgcaccgtgtgcagcgcccccgttaccaggctc
atccgggagtacgatgtccgggtggatacctccgcggagaaggagaagacccactacatc
ggcaggttcaccaccggcttgccgcccttatcgaatgagaggagcgcagggaatagatgg
actcttcgcaaggatgtcccccatggacagcagcttactgggaatatgcgggacaagcac
tacagcaagatgccatggattctggaggatgagacgggggaacatcagtatcagggccaa
actgaggatccacctgccacatactattcgcttacgcaaaaaggcaatgacatgattgct
gttcaagttggttcctggtacaacttcagtaaaattgcacagtacaaacagctgaccttg
gaagaagctgaagagaaaatgaatagaaggagaagcagtgcatctgggtatgaacgatgg
atgatgaaggcagctacaaatggacctgatgcctttagttcagttgtgaagaggcttgat
gatgtaaatagaggggcaacaaacggtgttcaccccaagaaaggagataggaatgagaat
ggaaatcaatctgacaaagttgatgacaaagaagaagagggagctgcaaggaaaaacagg
cttgggcttactatgaaggacatgggcgaggattatgaggatagtggaaacgacatagaa
tttgatttggatgatgaaattgagaaaggtgatgattgggagcacgaggagatcttcact
gatgatgatgaggttgtggatgttgatatagagcaaagacctgagttagctgatcctgag
gctgctcctcctgaaattaaacaggatgacaacgaggatgaactaggctgcagtgacaac
ttgagcaagtccggccaggagctaaagaggctgctccgccgagctgctggggaaaatgag
tctgatgttgacgacaaaagcacatatgaagatgacctaccctcgccaaaacctgctcca
aaacttgtacccaaaagtgaaccagatgatagcagccctgctaaaccaacaccatcaggg
cacgctcagagcgctacaccttcatccaaatccactcaaaagaggaaatcagggggtggt
gatgcaaatatttctaatggtgcaccctcgaaaaagataaagatggaacatgaaaccgga
acattggctgtcaaggatgaaaatccgtcttatttggaaccaacttcgaaagcatctctt
tcagcaagaagagaatcatcacccattacagaggaagaagtcaggacagtacttcgtgca
atttcacccacgacaagccaagatctggtgtcgaggttcaagactcgtctaataactcaa
gaggacaagaaagcatttttgggcattgtgacgaaaatatctcgcatacttaagcacaac
ggcggtaggtatatcgttcttcggcacgaacatatgtga
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