Zea mays (maize): 103639442
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Entry
103639442 CDS
T01088
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103639442
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103639442
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103639442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_19
DEXQc_Suv3
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
103639442
NCBI-ProteinID:
XP_008660406
UniProt:
A0A1D6PH86
LinkDB
All DBs
Position
9:153434275..153460780
Genome browser
AA seq
2084 aa
AA seq
DB search
MLAPLPRLTSALRGHYDADQAYLLRKSALQALTLPRPHDEWKFARKIVPGWDDASSEVRQ
AYKQFIGAVVELLSGEAVSEELYQVAQTVYTLFGGDDTEYVGAKKVLSKRNELESLVGYT
VQDSVLKKLAQLAQKLDSLQRASAYESVHRIADDVNENDRIEFGADFDFKPLARFIVDVS
LDAPLESAELGSGPFEKWQYDAWSTSTTSHSTAVRGSVSLRWLKDQCALITKSGGSMLSG
DELAMTLCRVLLSNKAGDQIAGELLDLVGDTAFEIVQDLLLHRKELVDAIQHGLSILKSE
KMTSGNQPKMPTYGTQVTVQTESERQLDKIRRKEERRSKRSADSGNNDIGVDDFSSLLLA
SERKEAFDDVIGSGEGSDSFTVTSLPQGTTRKHMKGYEEVKIPPTPTASLKPNEKLIEIK
ELDEFAQAAFQGYKSLNRVQSRIFQATYYTNENILVCAPTGAGKTNIAMIAVLHEVKQHF
RDGILHKNEFKIVYVAPMKALAAEVTATFSRRLSPLNLVVRELTGDMQLTKNEIEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLIIIDEVHLLNDDRGSVIEALVARTLRQVESMQSMI
RIVGLSATLPTYLEVAHFLRVNPDTGLFFFDSSYRPVPLAQQYIGISERDYTKRSELFNT
LCYEKVVESIKQGHQALVFVHTRKDTGKTARTLIDLAAKAGELELFSSADHPQFPLIKKD
VSKAKSREVVEFFESGFGIHNAGMMRSDRSLMERLFGDGLLKVLVCTATLAWGVNLPAHT
VVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTS
QLPIESQFLGSLKDNLNAEVALGTVTNVREACTWLGYTYLFIRMKTNPLVYGITWEEVMG
DPSMGAKQRTFIIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETYNEML
RRHMSESELITMVAHSSEFENIVVREEEQDELEALARKACPLEIKGGPTDKHGKISILIQ
VYISRAPIDSSSLHSDAQYISQSLARIMRALFEICLRRGWSEMSSLLLQYCKAVDRKIWP
HLHPLRQFDKDLSPQVLWKLEERNVDLDHLYEMEENEIGALIRFSHQGKLVKQYVGYFPY
VNLSATVSPITRTVLKVDLHITPEFVWKDRYHGMSERWWIIVEDSENDTIYHSELFTLTK
KMARGTPTKISFNVPIFEPHPPQYYIHAISDSWLHAETLFTVSFHNLTLPQTQITHTELL
DLKPLPLSALGNKTYEDLYRFSHFNPIQTQAFHVLYHTDNNVLLGAPTGSGKTISAELAM
LHLFSTQPDMKVVYIAPLKAIVRERMNDWRKRLVIQLGKKMVEMTGDFTPDLMALLSADI
IISTPEKWDGISRNWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERS
IRFVGLSTALANARDLADWLGVTDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK
PAYAAICTHSPNKPVLIFVSSRRQTRLTALDIIQLAASDEKPRQFLSIEDNSLDMVLSQV
SDSNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIK
GTEYYDGKTKRYIDYDITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPV
ESNLREHLHDHINAEIVSGTISNKEEAIIYLTWTYLYRRLVVNPAYYGLEDTETNTLNSY
LSRLVETTFEDLEDSGCIKVDDHSVKYLILGKIASQYYLSYLTVSMFGSNIGPNTTLEVF
LHILSAASEFDELPVRHNEDNLNRILSGNVPYPVDQHHLDDPHVKANLLFQAHFSRAELP
ISDYVTDLKSVLDQSIRIIQAMIDVCANSGWLTSALTCMHLLQMIIQGLWFERDYESLWM
LPSMNDDILDHLKSRGVSTVPSLLDLSREELRRVLQPFSASELYQDLQHFPHVDVKVKLH
NEQERSKPPTLNIRLQLKNSRRSASRAFAPRFPKAKQEAWWLVLGNATSSELYGLKRISF
ADRVINTRMELPQTFNVQETKLILVSDCYLGFDLEYSLEHLTKG
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaccgcttccgcgcctgacgagcgcgctccgcggccactacgacgctgatcag
gcctacctcctccgcaagagcgccctccaggctctcaccctccccaggccgcatgacgag
tggaagttcgctcggaaaatcgtgcctggctgggacgatgcttccagcgaagtgcgtcag
gcgtataaacaatttatcggggccgttgtggagttgttgagcggagaggcagtgtctgaa
gaactctaccaagttgcgcagactgtatatactctatttggtggcgatgacacggagtat
gttggtgctaaaaaagtcctttccaaaaggaatgagttggagagccttgtgggctacact
gtacaagactcagttttgaaaaagctagctcagttagctcagaagctcgattcccttcaa
cgagcaagtgcctatgaatctgtacacagaatagcggatgatgtaaatgaaaatgataga
attgaatttggagcagacttcgatttcaagccacttgcccgtttcattgttgatgtttct
cttgacgcacccttagaaagtgctgaattgggcagtggtccatttgaaaaatggcagtat
gatgcttggagcacatccacaactagtcattcaactgctgttaggggttctgtgagtttg
aggtggctgaaagatcagtgtgctttgataactaaaagtggtggctcaatgctctcagga
gatgaacttgcaatgaccttgtgcagagtgctcctatcaaataaagcaggcgatcagata
gctggtgaacttttggacctggttggcgacaccgcttttgaaatagttcaagatcttctt
ttgcataggaaagagctagtggatgcaattcaacatggattgtcgatactgaaatctgag
aaaatgacctcaggtaatcaaccaaagatgccaacttatggtacacaggtaactgtacaa
acagagtctgaacgccagcttgataagattaggaggaaagaggaaagacgtagcaagcgc
agtgcagacagtggcaataatgatattggtgttgatgatttttcatcccttcttttggca
agtgaacggaaggaggcatttgatgacgtgattggtagtggagaagggtcagacagtttt
acagtaacttcccttcctcaaggaaccacaaggaaacacatgaagggttatgaagaagtg
aagattccaccaactccaacagcatcactgaaacccaatgagaagctgattgaaataaaa
gaattagatgagtttgcccaagctgccttccagggatacaagtcactcaatcgtgtgcag
agtcgtattttccaagctacatactacaccaatgagaatattttagtttgtgccccaaca
ggtgctgggaaaacaaatattgcaatgattgcagttcttcatgaggttaaacagcacttc
agggatggtattttacataaaaacgagtttaagatagtctatgttgctccaatgaaggcc
ttggccgcagaggtaacagcaacattcagtcgccgattatctccattgaacctggttgtt
agagaacttacaggagatatgcagttgaccaaaaatgagattgaagaaactcagatgata
gtgactactcctgagaagtgggatgttattacacgcaaaagcagtgacatgtcactttca
atgctggttaagctgatcatcattgatgaagtacaccttttaaatgacgatagaggttca
gtaattgaggcgctagtagctcggactctccgccaggttgagtctatgcaatcaatgatt
cgcattgttggcctatctgctaccctgcctacctacttagaggtcgcacattttttgcgg
gttaatccagacactggacttttcttttttgactcaagctatcgtccagttcctcttgct
cagcagtacattgggatcagtgaaagggattacacaaagagaagtgaattattcaatact
ttgtgttatgagaaggttgttgagtccattaagcaaggtcaccaagcattggtttttgtc
catacccgtaaggatactgggaaaaccgctagaaccctgattgacctagcagcaaaagca
ggggaattggaattattttcaagtgcagatcatcctcaatttccattaatcaagaaagat
gttagtaaagcaaaaagtcgtgaagttgttgaattttttgaatctggatttggtatacac
aatgctggaatgatgcgatctgacagaagtttgatggagcgcttgtttggtgacgggctt
ttgaaagtccttgtttgtacagcaactttggcttggggagtaaacttaccagctcataca
gttgttataaagggcacacagctatatgatcctaaagctggtgggtggcgagacttgggg
atgcttgatgtgatgcagatctttggacgtgctggaaggccacagtttgataaaagtggc
gaaggaattattatcacaacacatgacaaattggcttattacttgaggttattgacaagt
cagcttccaatagagagccagttccttggatctctgaaagataatttaaatgctgaagtt
gctttgggcactgtaacaaatgtcagggaggcttgtacctggcttggctatacatactta
tttataaggatgaagactaatcctctggtgtatgggataacttgggaagaggttatggga
gatccttctatgggtgcaaagcaaagaacatttattattgatgctgcacgagcactggac
aaagctaagatgatgcgctttgatgaaaagagtggtaacttctactgcaccgaacttggt
cgaattgcaagtcatttttaccttcagtactccagtgtcgagacttacaatgagatgctt
cgacgtcacatgagtgaaagtgagttgattactatggtggcccattcctctgaatttgag
aatatcgtagtaagagaagaagaacaggatgaattagaagcccttgcaaggaaagcatgc
cctttagaaattaagggtgggccgactgacaaacatgggaaaatttcaattctcatacag
gtttatatttcccgtgctccaatcgatagctcctctttacattctgatgctcaatacatt
agtcaaagtttggcacgcataatgagggcactatttgagatttgtctgcgtcggggatgg
tctgagatgtcatccttattgttgcaatattgcaaggccgtggaccgcaagatatggccc
catcttcatccacttaggcagtttgataaggatctttctcctcaggtattgtggaaactc
gaggaaagaaatgttgatctggatcatctttatgagatggaggaaaatgaaattggagct
ctgatccggttttctcatcagggaaagttggtcaagcaatacgttggatacttcccgtat
gtcaacctatctgcaaccgtgagcccaatcactaggacagttcttaaagtggacctgcat
ataactcctgaatttgtgtggaaagatcgttatcatggcatgtcagaacgatggtggatc
attgttgaggattctgaaaatgataccatttatcattcagagctattcacattaacgaag
aagatggcaagaggaacacctacaaagatatcttttaatgtaccaatatttgaacctcat
ccgccacagtactatatacatgccatctcagactcatggctacatgctgaaacactcttc
actgtttcttttcataatttgacattgccacagacacaaataacacacacagaactcttg
gacttgaagcctcttccactgagtgctcttggcaacaaaacgtatgaggatctgtacaga
ttttcccatttcaacccgatacaaactcaggcttttcatgttctttatcacactgataac
aatgtactcttgggagctccaactgggagtggcaaaacaatttcggcagaacttgcaatg
ctccatcttttcagtacacaaccagacatgaaggtagtttacattgctcctctaaaggca
atagtacgagaaagaatgaatgattggagaaaacgtcttgtaattcagcttgggaagaag
atggttgagatgactggtgacttcactccagatttgatggccctattgtcagctgacatc
atcatttctacccctgaaaaatgggatgggattagtcgaaattggcatagcagaagttac
gttatgaaggtcgggctcatgatattggatgagatacatcttctgggagctgaccgtgga
cccatccttgaggtcattgtatcaagaatgcgatacatatcatcacaaacagaacgttca
attcggtttgttggtttatcaacggcattagcaaatgctcgtgatttagctgattggttg
ggcgttacagatgacggtctattcaatttcaagcctagtgtgagacctgtacctcttgaa
gtgcatatccagggatatcctgggaaattctattgtccaagaatgaatagcatgaacaaa
ccagcttatgcagccatatgcactcattcacccaataaaccagttctcatttttgtgtca
tcacgtcgacagacaagacttacagctcttgatatcattcagcttgcagcatcagatgaa
aaaccaaggcagttcctgagcattgaagacaactccctagacatggttctttcacaggtt
tctgacagtaatttgaggcatactctgcaatttggcataggtctgcatcatgctggttta
aatgacagagacagatccttggttgaggagcttttttcaaacaataagattcaggtgctg
gtatgtaccagcacattggcgtggggtgtcaatcttccagctcacctggtcataatcaag
ggcactgaatactatgatgggaaaacaaaaagatacatagattatgatatcacagatatt
ctgcagatgatgggtcgtgcaggtcggccgcaatacgaccaacatggcaaagctgttatt
cttgtccatgaaccaaaaaagagcttttacaagaagttcctctacgaaccgtttcctgtg
gaaagtaatctgagggagcacttgcatgaccacataaatgcagaaattgtttctggcacc
atcagcaacaaggaggaggcgattatttatctcacctggacttacctatatcgcagattg
gttgttaatccggcctattatggattggaggatactgaaacaaacacattgaattcttat
ctatcaaggttagtcgaaactacatttgaagatcttgaggacagtggatgcataaaagtg
gatgaccactctgtaaagtacttgattttggggaaaatagcttcacagtattacctgagc
tacctcactgtttcaatgtttgggtcaaatattggccccaacacaacgttggaagtcttt
ctacacatactgtcagctgcatcagaatttgatgagcttcctgtacggcacaatgaggac
aatttgaatcgaatactcagcggaaatgtcccgtatccagttgatcaacaccaccttgat
gatccacatgttaaagccaacttactctttcaggcacatttctccagagcagaattgcca
ataagcgactatgtcactgacttgaaatcagttcttgatcagagcatacgcatcatacag
gcaatgattgatgtatgcgcgaatagtggatggcttacgagtgcattgacttgcatgcat
ctcttgcagatgatcatacagggtctctggtttgagagagattatgaatccctctggatg
ttgccatccatgaatgatgatatattagaccatctcaagagtagaggagtctcaacagtc
ccctccttactagatctttcccgtgaagaattgcgtagggtacttcaaccattttctgcg
tcagagttgtatcaggatctgcaacatttccctcatgttgatgtgaaagttaagcttcat
aatgaacaggagcgatccaaacctccaactttaaacatcaggttgcaattgaaaaattcg
cgacggtcagcatcaagagcatttgcccctagatttcccaaggcaaaacaagaagcttgg
tggcttgtcctggggaatgctacaagttcagagctgtatggtctgaaaagaattagtttt
gcagatcgggtgattaatactcgcatggaattgccacagacgttcaatgtgcaggagacg
aagctgatcttggtgtcggattgctacctaggttttgacttggagtattctcttgagcat
ctcaccaagggttga
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integrated database retrieval system
