Zea mays (maize): 103639808
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Entry
103639808 CDS
T01088
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103639808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103639808
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103639808
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103639808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103639808
NCBI-ProteinID:
XP_008660734
LinkDB
All DBs
Position
9:23090400..23091217
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AA seq
268 aa
AA seq
DB search
MAPPLVFTSIGASMNAAVRDVWASNFDEELSNLSAVLPRYPCVCLDTEFPGAVHDSDMPR
YMRGPRESYELVKRNVDDLKLLQVGIALSGPAGRFPIAWQFNIRGFDPALHPHAPASIAM
LREQGMDFAMLNEFGIDPEDFAAGFRRSGLACGWLTWTAFSGSYDFGYLAKALTGGQPLP
DTLDGFLALVRRLFGHSVFDVKHLARCCALRGGLEQVATALGVKRAAGRAHCAGSDSLLT
TDVLLLMMDRFFRNVDVLAHAGTIVDLT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccctggtcttcacgtccatcggcgcgtcgatgaacgccgccgtgcgcgac
gtttgggccagcaacttcgacgaagagctctccaacctatcggcggtgctgccgcgctac
ccctgcgtttgcttggacaccgagttccccggcgcggtacacgactcggacatgccgcgg
tacatgcgcggcccgcgggagagctacgagctggtgaagcggaacgtagacgacctcaag
ctgctgcaggtcgggatcgcgctgtcgggccccgccggccggttccccatcgcgtggcag
ttcaacatccggggcttcgaccccgcgcttcacccgcacgcgccggcctccatcgccatg
ctccgcgagcaggggatggacttcgccatgctgaacgagttcggcatcgaccccgaagac
ttcgccgccgggttccgccgcagcggcctcgcctgcgggtggctcacctggaccgccttc
tcgggctcgtacgacttcgggtacctcgccaaggcgctcaccggcggccagccgctgccg
gacacgctggacggcttcctcgccctggtccgtcggctgttcggacacagtgtgttcgac
gtgaagcacctcgccagatgctgcgccttgcgcggggggctggagcaggtggccaccgcg
ctcggcgtcaagcgcgccgccggccgcgcgcactgcgccggctccgacagcctgctcacc
accgacgttctcctgctaatgatggatcgcttcttcaggaacgtcgatgtgctcgcgcac
gccggaaccatcgtagacctcacctag
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