Zea mays (maize): 103640981
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Entry
103640981 CDS
T01088
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103640981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103640981
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103640981
Complex C
U5 SnRNP specific factors
103640981
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
Suf
TPR_19
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
PMC2NT
Motif
Other DBs
NCBI-GeneID:
103640981
NCBI-ProteinID:
XP_008662633
UniProt:
K7TYH4
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All DBs
Position
10:complement(27954798..27957931)
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AA seq
956 aa
AA seq
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MSGTTPTPTPTPPPLPPPPAARPVRYDFLNSKPPANYVAGLGRGATGFTTRSDIGPARAA
PDLPDRSAAAAGPAVGRGRGKPPGEDDGDDDGGDEEKGYDENQKFDEFEGNDAGLFSNAD
YDDDDREADAVWESIDQRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRKLADLS
AQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGGTETPW
AQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAEISDIK
KARLLLKSVTQTNPKHPPGWIAASRLEEIAGKLQIARQLIQRGCEECPKNEDVWLEACRL
ASPDEAKAVIARGVMSIPNSVKLWLQAAKLESSDLNKSRVLRKGLEHIPDSVRLWKAVVE
LANEEDARLLLHRAVECCPLHVELWLALARLETYDQARKVLNKAREKLPKEPAIWITAAK
LEEANGNTQSVNKVIERGIRSLQREGMDIDREAWLKEAEAAERAGSVLTCQAIVKNTIGI
GVDDEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEKSHGTRES
LDALLKKAVNYNPRAEVLWLMAAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLE
FENNEPERARMLLAKARERGGTERVWMKSAIVERELGNVGEERRLLEEGLKLFPAFFKLW
LMHGQMEDRLGNGAKAKEVFENGLKQCPSCIPLWLSLATLEEKISGLSKSRAVLTMARKK
NPATPELWLAAIRAELRNGNKKEADALLAKALQECPTSGILWAAAIEMAPRPQRKGKSTD
AIKRSDHDPHVIATVAKLFWLDRKVDKARSWLNRAVTLAPDIGDFWALYYKFELQHGNVD
TQKDVLKRCVAAEPKHGEKWQAITKAVENSHLPVEALLKKAVVVLDVEENANPGGA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaccactccgacccctacacctacaccgccgcctctcccgccgccgccggcc
gctcgccccgtgcggtacgacttcctcaactcgaagccgccggccaactacgtcgcgggg
ctcggccgtggcgcaaccggcttcaccacccgctcggatatcgggccggcccgggccgcg
cccgacctacccgaccgctcggccgccgccgccggccctgccgtcggccgcggccgcggg
aagcctcccggcgaggatgacggcgacgacgacggcggcgacgaggagaagggatacgac
gagaaccagaagttcgacgagttcgagggcaacgacgccggtctcttctccaacgccgat
tacgacgacgacgaccgcgaggcggatgctgtgtgggagagcatcgaccagaggatggac
tcgcgccgcaaggatcgccgcgaggcgcgcctcaagcaggagattgagaagtaccgcgcg
tcaaaccctaaaatcaccgagcagtttgctgatctcaagaggaagctggctgatctgtcc
gcgcaggaatgggagagcataccggaaattggggactactcgctgcgcaacaagaagaag
cggtttgagagcttcgtgcccgtgccggacaccctgcttgagaaggctcggcaggagcag
gagcatgtcacagctcttgaccctaagagccgtgcggctggtggcacagagacgccatgg
gcacagactcctgttactgatctgacggctgttggcgagggtcgtggcactgtgctctcg
ctcaagttagataggctgtcagattcagtttctgggctcactgtagttgatccgaaaggg
tatttgacagacctgaaaagcatgaagattactagtgatgctgagatttctgacatcaag
aaggcgcgtctattgctcaagtcagtgacgcagacaaatcctaagcatccccccggttgg
attgccgcttctaggctcgaagagattgctggcaagcttcagattgctcgacagcttatc
cagcgtggctgtgaagagtgccccaagaacgaagatgtgtggcttgaagcatgccgtttg
gccagtccagatgaggcaaaggctgtaattgcccgtggtgtgatgtcaattccaaattct
gtgaagctatggttgcaggcagcaaaattggagagcagtgatctgaataagagcagggtt
ttgaggaaagggctggagcacattcctgattcagtccggctatggaaggctgtagttgag
cttgcaaatgaagaggatgcaaggttgttgcttcacagggctgtggagtgttgcccgttg
catgtggaactttggcttgcccttgcaaggctggagacctatgaccaagcaaggaaagta
cttaacaaggccagggagaagctccccaaggagcctgccatttggattacagctgcaaag
ctagaggaggctaatgggaacacacaatcagttaacaaggtgattgagagaggtatcaga
tctctacagagagaaggaatggatattgatagggaagcatggttgaaggaagcagaagcc
gcggagcgtgctggatctgttttgacttgccaggctattgtgaagaacactataggcatt
ggtgttgatgatgaggatcggaagcgcacgtgggttgctgatgctgaggaatgcaagaag
cgtggttcaattgaaacagcacgcgccatctatgcacatgcgcttactgtgttccttact
aagaagagtatttggctgaaagcagcacaacttgagaagagccatgggactagggagtca
cttgatgcgctcctcaagaaggctgttaactacaatccacgagctgaagtattgtggctt
atggctgcaaaggagaaatggttggctggagatgtgcctgctgctcgtgcaattcttcag
gaagcttatgctgctatccccaattcagaagagatctggctggctgcattcaagctcgag
tttgagaacaatgagccggagagagcaagaatgctcttggccaaggccagggaaagagga
gggacagagagggtttggatgaaatctgccattgttgagagggaattggggaatgttggt
gaggaaaggagattgttggaggaaggtttgaagctattccctgcattcttcaaattgtgg
ttaatgcatggacagatggaagaccggcttggtaatggagcgaaggccaaggaggttttt
gagaatggcctgaagcagtgccctagttgcatccctctttggctctctctagctacccta
gaggagaagattagtggcttgagtaaatcacgtgctgttctcacaatggctagaaagaag
aaccctgctacacctgaactctggctagcggcaattcgagctgaattgaggaatgggaac
aaaaaggaagccgatgctctactggccaaggcattgcaagagtgtccaacaagtggtatt
ttgtgggctgcagctattgagatggcaccacgcccacagcgtaaaggaaagagcacagat
gctattaagcgaagtgatcatgatccacatgtcattgcaactgtggccaaacttttctgg
cttgacaggaaggttgataaggctaggagttggttaaacagggctgttactcttgctcct
gatattggtgatttttgggcattgtactacaaatttgaacttcagcatggaaatgtggac
acacaaaaggatgttctgaaaagatgtgttgcagcagaaccaaagcatggcgaaaaatgg
caagcaataaccaaggctgttgaaaactcacacctgcctgttgaggctcttctgaagaaa
gctgttgtcgtgcttgatgtagaagaaaacgccaatccgggaggagcctag
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