Zea mays (maize): 103641317
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Entry
103641317 CDS
T01088
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zma
Zea mays (maize)
Pathway
zma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103641317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103641317
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103641317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF87
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
103641317
NCBI-ProteinID:
XP_008662887
UniProt:
K7TI52
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All DBs
Position
10:85190736..85196459
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AA seq
950 aa
AA seq
DB search
MSQSPGGREGIYYSRQRKPSERNGSVFTPIAAMYPSGHALPDANRNHSLVFGGTSKDWDN
IRQFIASLERASENSSAIASKTGGGKSTNHSVEPAEQKGKGDIIVLDSDDEDGDGNSPEH
NKLASEMNKELGTSVLASNIAERMATNGSQTFETVHAYGGSKNTQIVPYGQGSALVNQFP
LQTSWQPSIQFERVVLTKRPEEQRMQDLVAATIAEKRAETQMFLSLPTERKRRRTDHSLL
MLDSFVPKQRRRKGDTGLAPADLSLDLHQTATSQEPDIAIEEEEKRKNDGDGLEDYWKDF
ALAVESTKLDDVDEAAANEKEDNGKMEDIDCNHDIRIHEDLGHVCRVCGMIVRRADSIID
YQWKKASRRRMNGYGGNSKDADEIDCGTVKLSEDFIVADIAIHPRHAQAMKPHQVEGFNF
LVKNLIGDKPGGCILAHAPGSGKTFLLISFIQSFMARYPSARPLVVLPKGILVIWKKEIQ
RWQVQDIPVYDFYSVKAEKRVEQLQILKSWEDKMGILFLGYKQFSTIVTDDGGSKVTAAC
RDRLLKVPNLLILDEGHTPRNKETDVLESLSRVETPRKVVLSGTLFQNHVEEVFNILNLV
RPKFLRMESSRPIARRIMSQVEIFGRSSKGLADGAFTEAVEGTLLNDENFKRKVHVIRGL
RELTRDVLHYYKGAILDELPGLVDFSVFLKLTPKQKDIVHKLEMHDRFKRSAVGSALYIH
PCLSGLSEVNAENRAHTLRDDSVDSLMDSINVRDGVKANFFMNILSLANSAGEKVLAFSQ
YILPMTFFERLLVKKKGWHVGREIFMISGDTSQEDREAAVDRFNSSADAKVLFGSIRACG
EGISIVGASRVVILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSDEVKVHETAFK
KEVIQKLWFEWSEQCTTENFKLGQVDIDDSGDELLDTRAIRQDIKALYRR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtcaccgggaggacgggaaggcatatattacagcaggcagaggaaaccttcg
gaacgcaacggcagtgtatttacacccatagctgcaatgtatcccagcggtcacgcactt
cctgatgcaaacaggaaccacagtttggtatttggcggtacgagcaaggactgggacaac
atccgtcagttcattgctagtctggaacgcgcctctgaaaactcctctgcgatagccagc
aaaaccggaggtggcaaatcgaccaaccattccgtggagccagccgaacaaaaaggaaag
ggtgacataatagttctcgattcagatgatgaggatggagatggaaacagtccagaacac
aataagttggcatctgagatgaacaaagaactcggaacatctgtattggctagtaatatc
gcagaaaggatggcaactaatgggagccaaacatttgaaaccgtgcatgcttatggaggt
agtaagaacacgcagattgttccgtatggccaaggttctgctctggtgaatcagtttcct
ttgcaaaccagttggcaaccatctattcagtttgagagagttgtgttgacgaaaaggcct
gaggagcagcggatgcaagatcttgtggctgctaccatagcggagaagagggcagaaaca
caaatgttcctatcacttcctacggagagaaagcgaaggagaacagaccatagtttgttg
atgcttgactcatttgtccctaaacaaagaagaagaaaaggtgacacaggtctagcacca
gctgatttgtcattggatttacatcaaactgctacatcacaagaacctgacatagctata
gaggaagaagagaaacgtaaaaatgatggtgatggtcttgaggattattggaaagatttt
gcattggctgttgaaagcacaaagcttgacgatgttgacgaggcggcggcaaatgaaaag
gaagataatggaaagatggaggacatcgactgcaaccatgacattcggattcatgaagat
ttgggccatgtatgccgtgtgtgtggtatgattgtgagaagagctgattcaataattgat
taccagtggaaaaaggcttcaaggagaagaatgaatggctatggaggaaattcaaaggat
gctgatgagatagactgtggtactgtcaaactgtctgaagatttcatagttgcagatatt
gctattcatcctagacacgctcaggcaatgaaaccacatcaggtggaaggtttcaacttt
ttggttaagaatttgattggagacaagcctggaggttgcattcttgctcatgccccaggt
tcagggaaaacatttttgcttataagcttcattcagagcttcatggcaaggtatccatct
gcaaggccccttgttgtgctgcctaaagggatactagttatatggaagaaagaaattcaa
cgatggcaagtgcaggatataccagtgtacgatttctactctgtaaaggctgaaaaaaga
gtagaacagttgcaaatcctcaaatcttgggaggacaagatgggtatactgtttcttgga
tacaagcagttctccacaatcgtcactgatgatgggggcagcaaggtaacagctgcatgc
cgggacaggctgcttaaggttcccaaccttctgatacttgacgagggtcatacacctaga
aataaggagactgatgtactagagtcgctaagtagagtagaaacaccacgcaaagtggtt
ctctcaggtacacttttccagaatcatgttgaggaagtgtttaatatcttgaatcttgtc
cgcccaaagtttcttaggatggaatcgtcacgccctattgccagacgtataatgagtcag
gttgaaatatttggcagaagttcaaaagggcttgctgatggcgcattcactgaggcagtt
gaaggaaccttgttgaacgatgaaaacttcaagagaaaagttcatgttattagaggtctt
agagaactaacaagggatgtgcttcactattataagggcgctatattagatgaactacct
ggcttagtagacttcagtgtgtttttgaagctcacacccaagcagaaggacattgttcac
aagttggaaatgcatgataggttcaaaagaagtgcagtagggagtgcactgtacatccat
ccttgtctttcaggactttcagaggttaatgctgagaacagggctcacaccttgagagat
gattcagttgatagtctgatggattccatcaatgtgagagacggcgtgaaggccaatttt
ttcatgaatatcctgtcacttgctaattccgcaggagagaaagtacttgcttttagccaa
tatatacttcccatgaccttctttgaaaggctgctggttaagaagaagggctggcatgtg
gggagagagattttcatgatctctggcgacactagccaagaagacagagaagcggcagtg
gaccgtttcaacagctccgctgatgcgaaggttctgttcggttcgatcagggcatgtgga
gagggcatttccatcgtcggcgcgtcgagagtcgtcattctggacgttcacctgaaccca
tctgtcacccgtcaggcgatcgggcgcgcgttcaggcctggccagcagaagaaagtgttc
gtgtacaggctcgtagctgccgactctgacgaggtgaaggtccacgagacggcgttcaag
aaagaagtcatacagaagctgtggtttgaatggagcgagcagtgtaccacggaaaacttc
aagcttggtcaagtcgatatcgacgactctggggacgagctattggataccagagcgatc
cgccaggatatcaaggcgctgtacagaaggtag
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