Zea mays (maize): 103641455
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Entry
103641455 CDS
T01088
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
zma
Zea mays (maize)
Pathway
zma03440
Homologous recombination
zma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103641455
03460 Fanconi anemia pathway
103641455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zma04121
]
103641455
03036 Chromosome and associated proteins [BR:
zma03036
]
103641455
03400 DNA repair and recombination proteins [BR:
zma03400
]
103641455
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103641455
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103641455
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103641455
FA (Fanconi anemia) pathway
Downstream FA components
103641455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
103641455
NCBI-ProteinID:
XP_008663017
LinkDB
All DBs
Position
10:complement(98435518..98463650)
Genome browser
AA seq
1545 aa
AA seq
DB search
MPSKWQVWGQPDGSIVWLPVSDAPPNPPRPGPLRPAPRHPPLPDEAPIEETLCPDTAGGC
RISSMADLLLQAREQLIEGDAMDGLAQSVNTAGLFSTGSGRPLAVSQRAVRRASALVGEE
VDEATDNNNKKRKKPFGCDAGLEGELANLHVPFGGGVHKDNFFPMFQSGSGKAVLLNKDS
IQKARAVLEENVENAAGAKQPMFHTSTGRSVLVSKSSIDKARAVLGGRMIAHEGDVGGVD
GMEQFPVSQAGSGRAVSIRNVEGPGRPANQSLIFQTSSGRPVLISKRYVERSRALLMDED
VKNIRQWDTGCQLPIFQTGLGRPVAVKHSSIKKASTILGDGDVKRSGNGHTGVCTTPFQF
ETPKSVLMSSSLIINGMTVTPEENTSVRAEKCFNDDGQLPLFQTGSGRSVTASKGSFKRA
SSVLEPRNIAKELEDESHLNDGYATSIFKTGLGKSILPTENSRERAQFVLEAKEAVKQAV
ISDIGAGFGENPMFHSGKQQFSPENDTSRPRASTPMEQGKFATKGYEDCGSPLPMFQTGS
GKSVLVCESSMQKARAVLEEEEHYKLVKMDKKIAASASPLKTSHARTVNISSTGVSRAAT
LLGLEENTLSTQFFGHVSDKLGTEITVKRGNPEHMLDVASAHAISSGTHKGFIYPTENPT
HMDKHQQFGFSKSSTSYVGEHSIRFSTAGGRSMAISVDALQRAKSLLGDSDLVVSPNGSI
GRSLASAIENLPKPTISPKGDVSNLSYGTRAIGYAVPDTPVTKTSANQFHMGREYRPVNE
IPKVPKPPSRCLSEGDNASNSKDKTQWHHMPAGPLVDITNYMATCSGNTDCLANGKRIIG
GRNSVSPFKRPRSSRFITPIKNNKLSSAGESIVPPMQISPCRTMLSVRYPFQHQRKNYKE
YFGGPPCFKYLTEHVTDDVKLMDARRAEKFRFQHMDTGAEEFQKMLLTCGASLSCATKEW
VSNHYKWIVWKLASLERCYPTRVAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGN
SSPSLMMVLCISAIYSCPYQNNNKLEVNKVDTNEDNSGNQSFSATNRNMSANIELTDGWY
SLDASLDVALLEQLEKRKLFVGQKLRIWGASLCGWSGPVSFHEVSGVVKLVVHINGTYRA
RWNDALGFCKHVGLPLAFRCIKVSGGRVPRTLVGITRIYPILYRERLPDGRFVVRSERME
RKALELYHQRVSKITEDILFEQQENCDSTDDNEEGATICKMLEHAAEPEFILAGMTPEQL
KCFSSYIEKQKIVKQNEVSEKVEKALVVAGLSSRDVTPFLKVRVIGLVNKHSASTSSNKE
GLITIWNPTEMQKDNLVEGQAYSVMGLVPSNYCTEIMYLHARGSSTTWKPLASAQTTDFK
PFFTPRRAIELLKFGEVPISSEFDIAGLILYVGNTYLCNNKKKQWLFLTDGSKFVSGQGC
EEQDCLLAVSFSSATTDEDSTLFSYTLSGNTVGFSNLVKRQKDETRQVWVAEATESSSYT
LSNEIPRKSHLKEAAVLAERWASRSYHKIQELKERVLCIVGNAGV
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaagtggcaggtctggggccagcccgacggcagcatcgtctggctccccgtc
tccgacgcgcccccaaacccgcctcggccgggtccgcttcgtcccgctcctcgtcatccg
ccgctgcccgacgaagcgccaatcgaagaaaccctatgcccggacaccgccggcggatgc
cgtatctcttctatggccgacctactccttcaagcgcgggagcagctgattgaaggcgat
gcgatggatggattggctcagagtgtcaatacggctggactgttctccaccgggtctggg
aggccactggctgtcagccagagagccgtaaggagggccagtgcgttggttggcgaggaa
gtggacgaggctactgataacaataacaagaagagaaagaaaccatttggttgtgatgct
ggtctggagggtgaactggcaaacttacatgttccatttggaggtggtgtgcataaagat
aacttcttcccaatgttccaaagtggatctggtaaggcagtcttgctcaacaaggactca
attcagaaggcaagagctgttctagaagaaaatgttgagaatgcagctggtgccaaacag
ccaatgttccataccagtacgggtagatctgtcctagtcagcaagagctcaatcgataag
gcgagagctgttttagggggtcggatgattgcacatgaaggagatgtaggaggtgtggat
ggtatggaacagtttcctgtgtctcaagctggttcaggtagagctgtatcaatcagaaat
gtggaaggtccaggtagaccggccaatcagtctctgatatttcaaactagttccggaaga
ccagttttgatcagcaaaagatacgtcgagagatctagggctctgctgatggatgaagat
gttaaaaatattcgacaatgggatactggctgccagctcccaattttccaaacaggactt
ggaaggcctgttgctgtgaaacatagttcaattaaaaaggcaagcacaattttgggggat
ggagatgttaaaagaagtggtaatggacataccggtgtttgtaccacacctttccaattt
gaaacaccaaaatccgttttgatgagtagcagtttgattattaatggcatgacagttaca
ccagaagaaaatacttcagtgcgagcagaaaaatgtttcaacgatgatggccaattgccg
ttatttcagactgggtcagggaggtcagtcacagcaagtaagggttcctttaaaagggca
agttctgttctggagccaagaaatattgcaaaggaattggaagatgaatctcatctcaat
gatggttatgccacctcaatatttaaaactggacttggaaagtctatcttaccaactgag
aactcaagagaaagggcacaatttgtattagaggctaaagaggctgtaaaacaagcagta
attagtgacattggagctggctttggtgaaaatccaatgttccattctggaaaacaacag
ttttcacctgaaaatgatacttcaagacctagggccagtacccccatggagcaaggcaaa
tttgcaacaaaaggatatgaagactgtggaagtccattgccaatgtttcaaactggatct
ggaaaatctgtattggtctgtgaaagctcgatgcaaaaggcaagagccgttcttgaggaa
gaagagcactacaagttggttaagatggacaaaaaaattgcagcctcagcttcaccgctc
aagacaagccatgcaagaacagtaaacatatcttcaactggtgtttctagagctgctacc
ttattgggcttggaggagaataccctttcaacacaattttttggacatgtgagtgataag
ttaggtacggagataactgttaagcggggaaatccagaacacatgcttgatgttgcatct
gcacatgcaatttctagtggcactcataagggttttatttatccaacagaaaaccccaca
catatggataaacatcagcagtttggattttctaaaagttctacctcttacgttggtgag
cattctatcaggttcagcactgcaggtggccgatcaatggctatctctgtcgatgcacta
caacgtgcgaaaagccttttgggtgattcagatttagtggtttctccaaatggttcaatt
ggtcgctctttggcatcagctatagagaatctaccaaaaccaactatttctccgaaagga
gatgtatctaacctatcatatggaactagagcaataggatatgctgtacctgacacccct
gtgactaaaacaagtgctaatcagtttcatatgggaagggaatatcgtccagtcaatgaa
attccaaaggtccccaagcctccctccagatgtttatctgaaggcgacaatgcgagtaac
tctaaagacaagacccagtggcaccatatgccagctggaccattggttgacatcactaat
tacatggctacatgttctggaaatacggactgcttagcaaatggaaagagaattattggg
gggagaaactccgtatctccattcaaacggccccgttcttccaggttcatcactccaata
aaaaacaacaaactatcttctgctggagaatccatagtgccaccaatgcagatcagtccc
tgtaggacaatgctatctgtacgttatcctttccaacatcaaaggaaaaattataaagaa
tattttggtggtcctccttgcttcaaatatttgactgaacatgtgactgatgatgtgaag
ctcatggatgcaagaagagctgagaagtttagatttcagcatatggatactggtgcagaa
gagtttcagaaaatgctgctcacatgtggtgcttcattgtcatgtgcaacaaaagaatgg
gtcagtaaccactataaatggattgtgtggaagcttgcttcacttgagaggtgctaccca
actagagttgctggtaaattcttgacggttgacaatgttcttgaggagcttaagtaccgg
tatgacagagaagtgaatcatggtcatcgatcagcaataaagaaaattttagaagggaat
tcttcaccatctttaatgatggtcttgtgcatttcagctatttactcttgtccttaccaa
aataacaataagttggaggttaacaaggtagatactaatgaagacaacagtggcaaccaa
agcttctctgccactaatagaaacatgtctgcaaatattgaattaactgatggatggtat
tcacttgatgcatcattggatgtggcacttctggaacaactagagaaaagaaagcttttc
gtagggcagaagcttcggatatggggagcttctttatgtggttggtctgggcctgtgtca
tttcatgaggtgtctggtgttgtcaaattagttgtccacataaatggcacctatcgtgca
agatggaatgatgccttaggattctgcaaacatgttggactcccactggcattcaggtgc
ataaaagtttctggtggtagagttcctaggacactggttggaatcacaaggatatatcct
attctctaccgggaaaggttgcctgatggtcgttttgttgtgagatctgaaaggatggaa
agaaaggcgctggaactataccaccagagagtatctaagatcacagaagatattctgttt
gaacaacaagaaaactgtgacagtactgatgataacgaggaaggggctacaatttgtaaa
atgctagagcatgccgctgagcctgagtttatacttgcgggcatgactccagagcagttg
aagtgtttctcatcttatatagaaaagcaaaagattgttaagcaaaatgaagtatctgag
aaggttgagaaggcccttgttgttgctggccttagttcaagggatgttacaccatttttg
aaagtgagagtgattggccttgtcaataaacattcagcttccacatccagtaacaaggaa
gggctaataacaatttggaatccgactgagatgcagaaagataatcttgtggagggacaa
gcttattctgttatgggattggtaccttcgaactattgcaccgaaatcatgtacttgcat
gctagaggatcatctacaacatggaagcccttagcatcagctcagactacagattttaaa
ccattctttacccctcgtagagcaattgaactcttgaaatttggtgaggtgccgatttca
agtgaatttgatattgcaggtcttattttatatgttggcaatacttatttatgtaacaac
aagaaaaagcagtggctttttttaacagatggatctaaatttgtctctgggcaagggtgt
gaagagcaagattgtcttctagctgttagcttttcgtccgcaaccactgatgaagactct
acattatttagttacactctctctggaaatacagttggttttagtaatctggtcaaacga
cagaaagacgagacgaggcaagtatgggtagctgaggcaacagagagctcaagctacact
ctttccaacgagattcctagaaaatctcacctaaaagaagctgcagttttggctgagaga
tgggcttctagatcttatcataaaattcaagagctaaaagaaagggttttatgtatagtt
ggcaacgctggtgtctga
DBGET
integrated database retrieval system
