Zea mays (maize): 103641667
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Entry
103641667 CDS
T01088
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103641667
03015 mRNA surveillance pathway
103641667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103641667
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103641667
mRNA cycle factors
P-body specific factors
103641667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
103641667
NCBI-ProteinID:
NP_001333590
UniProt:
K7TKJ3
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Position
10:complement(120778484..120790006)
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AA seq
503 aa
AA seq
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MKDPAHRTKVVLRRLPPAIAQQAVVDQVDLRFAGRYDWACFRPGNASQKNHRHSRLYLNF
KRPEDVVEFAEVFNGHVFVNEKGAQFKAFVEYAPSQQVPKSTIKKDGREGTIMKDPEYLE
FLEFISKPTEHLPSAEIQLERKEAERAAAGKEAPVVTPLMMYVRQQRAAKSMVHRPGSRL
SRKLASVVSSSSPKRSSEKRRSSTYVVRDNTKEKPTYIMVPKREEHTQREKDVAGNSGDA
TSGGTSGSGQVAEFKRDKIVILKGRGRIDSNTPNGATQHSSTPIKNVPPSRSRQDQRLEA
SGKIIKTILSNKEARSSNPSEHEQEGHMFNTEKDKRPPRAFNPRTIVKDQVVENAERSHF
DEKANHLHGSVPIGEKVERHARNRDRPDRGVWAARRYDKSTSAGSSHPSSSEFPQMQSHS
GDNILQLADGHGDRKTDTRGQGGSRGVPVENGHRHANRRGLPRGPKETEISASVPDAKNS
KRGSASYGAHERQVWVQKSSSGS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacccggcgcaccgcacgaaggtggtgctccggcggctgccgccggcgatcgcg
cagcaggccgttgtggaccaggtcgacttgcgcttcgctgggcggtacgactgggcgtgc
ttccgccccgggaatgccagccaaaagaaccatagacattctcgactttaccttaatttc
aagcgccccgaggatgttgttgagttcgctgaggtcttcaatgggcacgtatttgtgaat
gaaaagggtgctcagtttaaagctttcgtggaatatgcaccatcacaacaggttcccaag
tcaactatcaagaaggatggccgtgaaggaactattatgaaagatccggagtacttggag
tttcttgagtttatttcaaagcctactgagcatctgcctagtgctgaaattcagctcgaa
aggaaagaagctgaaagggcagctgctggaaaggaggcacctgttgtgacacctcttatg
atgtatgtccgccagcaaagggcagctaagagtatggttcatagacctggaagtagactt
agcagaaaacttgcaagtgtcgtaagcagttccagtcctaaaaggtcttctgagaagcgc
agatcctccacgtatgttgtacgagacaacactaaggagaaaccaacctatatcatggtg
ccaaagagagaggagcatacacaaagggaaaaagatgttgctggaaattcaggcgatgcc
acaagtgggggaacatctggatctggtcaggttgctgagtttaaaagggataaaattgtc
atattgaaaggaagaggaaggattgattctaatacacctaatggagcaactcagcactca
tcaacccctatcaagaatgtgccaccatcgcgttctagacaagaccagcgacttgaagcc
agtggaaaaattattaagactatactatcaaacaaggaagcccgcagttcaaatccttct
gaacatgagcaggaaggtcacatgtttaatactgagaaggataagcggccaccacgggct
ttcaaccctcgtaccattgtgaaagatcaggtagttgaaaatgctgagaggagccatttt
gatgagaaggctaatcatctccatggctccgttcccattggtgagaaggttgaaaggcat
gctagaaacagagatagacccgatcgtggtgtatgggcagctcgccgctatgacaaatct
acatctgcaggtagttcacatccttcgtcgtcagagttccctcaaatgcagtcacattct
ggagataatattttgcaactagcagatggtcatggagacagaaagacagacacaaggggt
caaggtggtagccgtggtgttcctgttgaaaatggacataggcacgccaaccgtcgtggc
cttccacgtggaccaaaggaaactgaaatatctgcaagtgtgcctgatgcgaagaattca
aagaggggctctgctagctatggtgctcatgagagacaagtatgggttcagaagtcaagt
tcaggctcgtga
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