KEGG   Zea mays (maize): 103642014
Entry
103642014         CDS       T01088                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
zma  Zea mays (maize)
Pathway
zma03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103642014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    103642014
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103642014
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Zn_ribbon_RanBP SpoIVA_ATPase
Other DBs
NCBI-GeneID: 103642014
NCBI-ProteinID: XP_008663551
LinkDB
Position
10:complement(142498255..142504518)
AA seq 682 aa
MPRKVVSGPDYDDDYDDYDEYDDDDDDDDEYDETRYGNNTPVMTGKETLKNSSSTVSVHW
TCSMCTFSNHESMVYCEMCGVFRETFVKSAKDGLLKDTAVAVSSEPRTSAASKNDSAKAP
VKTRAVNSDGDSMRKHASMSYDKANSTQLPSAGSSLGAEKKKKTPVLSEEVPVERIALLA
SDGFQSKGNQNSGASSSSQNDNVIQKLSSDVGQLNVNKNNVNVTKSCLPDEYKPEKWMLA
DLESRALSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKYMHKNEKESKEKGKGSFAFAW
AMDESSEERERGVTMTVAVAYLETKKFRVVLLDSPGHKDFVPNMISGATQADAAILVVDA
STGSFEAGMDGEGGKSVGQTKEHAQLVRSFGVEQLVVAVNKMDAVDYAKERFDFIKLQLG
SFLRSCNFKDSAITWIPLSAVENQNLIKAPSDARLTSWYQGFCLLDAIDFLQLPSRDVSK
PLIIPICDVIKSQSTGQLAAYGKLETGAIQIGSKVLVLPSGQEATVKAIERDSNSCTVAR
AGDNVAICLQGIDGKQLIPGGVLCHPGFPVPVANHLELKVLVLDITTPILVGSQVEFHIH
HVKEAARVTKIVALLDKTGKPSKSAPRFLKSKQNSVIQVTLDGAVCVQEFSKSRALGRAY
LRSAGRTIAVGVVNRIIGQDQN
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgcctcgcaaagttgtatctggacccgactacgatgatgactatgatgactatgatgag
tatgatgatgatgatgatgatgatgatgagtatgatgaaaccagatatggcaataatact
cctgttatgacagggaaagaaacattgaaaaattcctcaagtacagtgtcggttcattgg
acatgttccatgtgcacattcagtaatcatgaaagcatggtgtactgtgagatgtgtggt
gttttccgtgagacctttgtcaaatctgccaaggatggtctgttaaaagatacagccgtt
gcagtgtcaagtgagcctaggacatctgctgcgtcaaaaaacgattctgccaaggcgcca
gtgaagactcgtgctgtaaattctgatggtgattctatgagaaagcatgctagcatgtct
tatgataaagccaattccacgcagttaccatctgctggtagctcactaggtgctgaaaaa
aagaagaaaacccctgtactttctgaagaagtacctgtggagaggatagctctgttggct
tccgatggttttcagtcaaagggtaaccagaatagcggggctagcagttcttcgcagaat
gacaatgtgatccagaaactctcttctgacgtaggccagctaaatgtaaacaagaacaat
gtgaatgttacgaaatcttgtttgcctgatgagtataagcctgagaagtggatgttagct
gatctggagtcaagggcgttgagccaactgaaccttgcaatagtcggtcatgttgattcc
ggcaagtcgacactatctgggagattactgcatctcttaggaaggatatcaaaaaaatat
atgcacaagaatgaaaaggagtcgaaagaaaaggggaaggggtcatttgcttttgcatgg
gccatggatgagagcagtgaagaaagggaacggggtgtgacaatgactgtggctgtggct
tatttggagaccaagaaattccgtgtggttttgcttgactcacctggtcacaaagatttt
gtgccaaatatgatatctggtgcaacacaagctgatgcagctattcttgtcgttgatgct
tcaactggttcttttgaagctggcatggatggcgaaggaggaaaaagtgttggccagact
aaagagcatgctcagcttgttagaagctttggtgttgaacagcttgttgtcgcagtcaac
aagatggatgctgttgattatgcaaaagaaaggtttgatttcatcaagctacaacttggt
agtttcctgcggtcatgcaacttcaaggactcagctattacctggattcctcttagtgct
gtagaaaaccaaaatttgatcaaagctccttcagatgctcgtttgacctcctggtatcaa
gggttttgcctcttggatgctatagattttctgcagcttccttctcgggatgtttcaaag
cccttgattattccaatctgtgatgttataaagtctcagtcaacaggacaattggcagct
tatggaaaattggaaactggagccatccaaattggttctaaggtgttagttctaccttct
gggcaagaggcgactgtgaaagccattgagcgggactctaattcatgcaccgtagcgaga
gctggtgataatgtggcaatttgtttacagggtattgatggaaaacaactaatacctggc
ggggttctttgtcaccctggtttccctgtgcctgtagctaaccacttggagctgaaggtt
ctagtcctggacatcactactcctattcttgttggctctcaggtggagtttcacatacat
catgtgaaggaggctgcaagagtaacaaaaattgttgcattacttgacaagactggcaaa
ccaagtaaatcggcacctcgatttcttaaatccaagcagaattctgttatacaggtcaca
ctagatggagctgtctgtgttcaggaattctccaagagccgagctcttgggagggcatac
ttgaggtcggctgggcgcaccattgctgttggcgttgttaatcggataattggccaagat
cagaactag

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