Zea mays (maize): 103642764
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Entry
103642764 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC103642764
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103642764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103642764
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103642764
Spliceosome [BR:
zma03041
]
Complex C
Other components
Step II factors
103642764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
GIPC1_GH2
AAA_16
nSTAND3
Cas3-like_C_2
ABC_tran
RNase_II_C_S1
TsaE
Flavi_DEAD
Sigma54_activ_2
PhoH
Filo_VP35
AAA_30
Helicase_RecD
UBA_5
MukF_M
T2SSE
Motif
Other DBs
NCBI-GeneID:
103642764
NCBI-ProteinID:
NP_001355226
UniProt:
A0A804LTX3
LinkDB
All DBs
Position
1:197377875..197381627
Genome browser
AA seq
1161 aa
AA seq
DB search
MSLSRCSHVRAYERGCFVLDRFAAARLGRRRATRTDPPHISLACGPPFDTCRPSTAPPSF
HRSVRPVLPRSCAAQAPTLPCAQPRAPRMAMAAATGAGAVGEGMRRLTQLSLVSKVCSEL
ESHLGVADRVLAEFVVELGRASASAAAFAAALRDHGAELPDYLVRSLHAVITAIPDSAPA
PPASRGAGARGRVDKAAGEDEDQEPGLHQVRRGRVTRVANAGCFVRLDGGREGLVHVSQM
PARGRGRAGATVTLGQEVFVKVVSVDGAKLGLSMLDIDQDTERGLHPMRRPHPAEEDAPR
ANPPADRPRPAGRKKGVSGIFVSDEDDDDKAGPPTRRPTRRMTSPERWEVKQLIAAGVLD
AKNYPVLDEDEEGMLYQEEEVEELEIELNQDEPPFLWGKGRSSSDMSPVRISMNPEGSMS
RAAALQSALTKERRDIRTQEQRGMVDAIPKDLNRSWEDPISSGRYLMQELMGTGLSAQSV
PEWKMTYGKAGTYGQKSRLSIQEQRQSLPIFRLKKELISAVNDNQVLVVIGETGSGKTTQ
VTQYLAEAGYTTRGKIACTQPRRVAAESIAKRVAEEVGCRVGEEVGYSIRFDDCTGPETV
IKYMTDGMLLREILVDGDLSSYSVVMLDEAHERTIYTDILFSLLKQLIKRRNDLKLIVTS
ATLDAEKFSGYFFDCNIFTIPGRTFPVEILHTKQAESDYMDAALITVLQIHLTEPEGDIL
LFLTGQEEIDHACERLHERMKAFGGDIPELIICPVYSALPTEVQSKIFEPAPPCKRKVVV
ATNIAEASITIDGIYYVVDPGFAKLNVYNPKLGLDSLVITPISQASAKQRAGRAGRTGPG
KCYRLYTESAFRNEMPPTTIPEIQRANLGWTVLNMKAMGINDLLSFDFMDPPASQALISA
MEQLYSLGALDEEGLLTRLGRKMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNI
FYRPREKQAQADRKRSNFFQPEGDHLTLLTVYEAWKAKGFSGPWCVENFIQVNSLRRAQD
VRKQLLEIMDKFKLNVISAGNNSTKIGKALTAGFFFHAARKDPSDGYRTLADHQQVYIHP
SSALFHQQPQWVIYHEIVMTTKEYMRDVTAVDPRWLLELAPRSYKSVDPTKISKRKRQER
IEPLYDRYNEPNSWRLSKRRW
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctcacgttgtagtcacgtgcgtgcgtacgagcgagggtgtttcgttttggat
cgttttgcagcggcccgtctcggacgccgacgcgcaacacggacagatccaccacatata
tctctggcctgtgggccgccttttgacacctgcaggccgagcaccgcaccgccttccttc
caccgttccgtccgtcccgtccttccccgttcctgtgcagcacaagcaccgaccctgccg
tgcgcccaaccccgtgcgccgcgcatggctatggcggcggcgaccggcgcaggcgcggtg
ggcgaggggatgcgtcggctcacgcagctctcgcttgtctccaaggtctgctcggagctg
gagtcccacctcggcgtcgcggaccgcgtcctcgccgagttcgtcgtcgaactaggccgc
gcctccgcctccgccgccgccttcgccgccgcgctcagggaccacggcgccgagctgccg
gactacctcgtccgctccctccacgccgtcatcaccgccatcccggacagcgcccccgct
ccccccgcctcacgtggcgctggtgcccgggggcgcgtggacaaggcggcgggagaggac
gaggaccaggagccggggctgcaccaggtgcgccgggggagggtcacccgggtggccaac
gccggatgcttcgttcgcctcgacggcggacgcgaggggctcgtgcacgtctcccagatg
cccgcccgcggccgcggccgcgccggcgctaccgtcacgctcggccaggaagttttcgtc
aaggtcgtctcggtggacggcgccaagctggggctgtcgatgctagacatcgatcaggat
accgagaggggtctccatccgatgcggcgtccgcaccctgcggaggaggacgcgccgagg
gcaaatccgccagctgatcgccccagacccgccgggaggaagaagggggtttctgggatt
ttcgtttccgatgaggacgacgacgacaaggctggtcctccgacgcgcagaccaactagg
cggatgacctcgccggagaggtgggaggtaaagcagctgatcgcggcgggggtgttagat
gccaagaactacccggtgttggatgaggatgaggaggggatgctttatcaggaggaagaa
gtggaggagcttgagattgaactcaatcaggatgagccccctttcttgtggggaaaaggg
cgatcctcatctgacatgtctccagtgaggatttccatgaatcctgaggggtcgatgagc
cgtgcggcagcgctacaatccgcacttactaaggagaggcgtgatattcgcacacaagag
caaagaggaatggttgatgcgatccccaaggaccttaaccggtcatgggaggatcccatt
tcaagtggacggtatctgatgcaggagctgatgggcacaggactatcagcgcagagtgtg
ccggaatggaagatgacatatgggaaggccggaacatatgggcagaagtcgaggctttcg
atccaggagcagagacaaagccttccaatattcaggctgaaaaaggagctgatcagtgct
gttaatgacaaccaagttttggtggttatcggtgagactggctctgggaaaacaacccag
gttacacaataccttgctgaggcagggtatactacaaggggaaagattgcatgtactcaa
cctcgcagggttgctgcagagtcaattgcaaagcgagtagcagaggaggttggctgtcga
gtgggtgaggaagttggttattctatacgctttgatgactgcacagggcctgaaaccgtc
atcaagtacatgacagacggcatgctcctccgagagattttggtggatggagacctgtct
tcttattcagtggtcatgcttgatgaggcacatgagagaaccatctacacagacattctc
ttcagcttgctaaagcagctaattaagcggagaaatgatctcaagttaatagtcacttca
gccactcttgatgcggagaagttctctggttatttttttgattgcaatatcttcacgatt
cctggaagaacgtttccagttgagatactacatacaaaacaggcagagagtgactacatg
gatgctgcactgatcacggtattgcagatccatctgaccgagcccgaaggagatatccta
ttgttcctgactggccaggaagagattgatcatgcttgcgagcgtctccatgagaggatg
aaggcattcggtggggacataccagagcttataatttgtcctgtgtacagtgctcttcct
actgaagttcagtcaaagatattcgaaccggctcctccttgtaagaggaaggtggtcgtg
gccaccaacatagcagaagcatctattaccatagatgggatttactatgttgttgaccct
ggcttcgcaaagctaaatgtctataacccaaaactagggttagattcactggttatcact
ccgatctctcaggcgtcagctaagcaaagagcagggcgtgctggacgcacaggtccaggt
aaatgttaccgcctgtacactgagagtgcctttcgcaatgaaatgccaccaacaacgatt
ccagaaatccagagggccaacttggggtggacggttctgaatatgaaggcaatgggaata
aatgaccttttgtcatttgacttcatggaccctccagcatctcaagcactcatatcggct
atggaacaactgtacagtcttggtgccttagatgaagagggtcttcttactaggctaggg
agaaaaatggctgaatttccacaagaaccacctctttctaagatgctccttgctagtgta
gaccttggatgcagtgatgaaatactgacaatcattgcaatgattcaaactgggaacata
ttctatcgaccaagggagaagcaagcacaagcagatcggaaaagatccaactttttccag
ccagaaggtgatcatctcaccctactcactgtgtatgaggcatggaaggcaaaggggttt
tcaggaccatggtgtgttgagaatttcattcaggtaaactcactaaggagggcacaggac
gtgcggaaacagcttcttgagattatggacaagttcaagctcaatgtcatctctgccggg
aacaattccaccaagatagggaaagccctcactgctggattcttcttccatgctgcaagg
aaggaccccagtgacgggtaccggaccctagctgatcatcagcaagtttacatccacccg
agcagtgccctctttcaccagcagccacagtgggtgatctaccatgaaattgtgatgaca
acaaaagagtatatgagggatgtcacagcggtggacccaagatggctactagagttggca
ccgaggtcgtacaagtcggtggacccaacgaagatcagtaagcggaagcgccaagaaagg
attgaacctctctatgatagatacaatgaacccaactcgtggcgcctgagtaagcgccgc
tggtga
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integrated database retrieval system
