Zea mays (maize): 103643972
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Entry
103643972 CDS
T01088
Name
(RefSeq) WD repeat-containing protein PCN isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
zma
Zea mays (maize)
Pathway
zma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103643972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zma03009
]
103643972
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103643972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Pep3_Vps18
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_WDR41
Hira
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_SCAP
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
103643972
NCBI-ProteinID:
XP_008665366
UniProt:
A0A317YKZ4
LinkDB
All DBs
Position
1:280142807..280148343
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AA seq
816 aa
AA seq
DB search
MDKLRVHRCTGDAVEWSPSPIVALAASPCASQVAAAREDGSLELWLVSPGSVGWHNQLTI
QGNDESRVTSLVWGRRGGEATGRLLSSSVDGSVCEWDLFYLQQKIVLDTVGIPIWQMAIE
PSVDAKNTENNSSEFAVNGHPNQNDSSDSDLSNIDDGDNSEDEDGSTNTISSYHVNDFQR
LALACDDGSVRLYNVPESGALTYYRSLPRVSGRTLSVAWSSNAKFVFSGSSDGLIRCWDS
TSFHEMYRITVGLGGASNSPELCVWSLLFLRCGTIVSGDSTGSVQFWDSRHGTLLQAHSY
HKGDVNALTTVPSGNRVFSAGSDGQVILYKISKDEFGASKNVIKEQVQKWVYVGYLRAHT
HDIRALTMAVPICREDALPEEKVVKIRRREKHEFSYHRWAHLGVPMLISGGDDAKLFAYS
AREFTQFSPHNFCPAPQHPLIKLARNSTVNGDYVMLVQSSNFLDVLLVTVQNKLTTPSTS
SSRGDATVRQLVRLKSKGSRKIISSAACANGTLLAYSDGVRPCLFALRHKGGKKYTLDKL
ELPKGLPCSQSMLFTVDSSNLILAGRNGKIYIIDIATREISNVFHPTRRADGAKISREPP
VTKMFLSADGQWLAAVNCYGDIYVFNLEVQRQHWFISRMNGGSVTSGGFCPKNNTLIITT
SKNEVYVFDVETKQLGEWSKRYTHQLPRSFQEFPGEVIGLSFSPQSSSSVIVYSTRAMCY
IDFGLPVVEDVDLPNGSAGAAEKSDTKKIKKARQKRKAHDEESKQEKRNNLSFFAFKEPV
LFVGHLLDSSILIVEKRWMDVVEGFGAPVHRHIYGT
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctccgcgtccaccgctgtaccggcgacgcggtcgagtggtccccctcccct
atcgtcgcgctcgccgcctctccttgcgcctctcaggtcgccgccgcgcgtgaagacggc
tcactcgagctctggctcgtctccccgggctccgtcggctggcacaaccagctcactata
caggggaacgacgagtcgagggtcacatcactggtgtgggggcggagaggaggtgaagcg
accggccggctgctctcgtccagcgttgatgggtcggtttgtgaatgggatctattctac
ctgcagcaaaagattgttctagatactgttggaattccaatctggcaaatggcaattgag
ccttcagttgatgctaaaaatactgaaaataatagctcagagtttgctgtcaatggccat
ccaaaccaaaatgactccagcgattctgacttaagtaacattgatgatggtgataactct
gaggatgaagatggttctaccaacacaatatcttcatatcatgtgaatgatttccagcga
ctggctcttgcgtgtgatgatggttctgtacgattgtataatgtgcctgaatcaggtgca
ttgacttactataggtctcttccaagagtgagcgggcggactctaagtgtggcgtggagt
agtaacgccaaatttgtattttctggcagcagcgatggtttaatcagatgctgggattca
acatctttccatgaaatgtatcgtatcactgttggattgggaggggctagtaactcacct
gaactttgtgtctggtcactattgtttctgaggtgtggaactattgttagtggagatagt
accgggagtgtacagttttgggatagccgccatggaacacttctgcaagctcactcttat
cataaaggcgatgtgaatgcactaacaactgtgcctagtgggaacagggtattttccgca
gggtctgatgggcaggtaattttgtacaaaatatcaaaagatgaattcggtgctagtaaa
aatgtgatcaaagagcaagttcagaaatgggtctatgtgggatatctcagagctcacact
catgatataagggcattaaccatggctgtgcctatctgtagagaagatgcattacctgag
gaaaaggtggtgaagattcgccggcgtgaaaaacatgaattcagctaccacagatgggct
catcttggggttccgatgcttatatctggtggtgatgacgccaagctgtttgcatattca
gcaagagagtttactcagttctcacctcataacttctgccctgcacctcaacaccctttg
ataaagctggctaggaatagcacagtcaatggagattatgtaatgcttgtccagtcttcg
aacttcttggatgttttacttgtgacagttcagaacaagctgacgactccaagtacatca
tcatctagaggagatgctacagtccgacaacttgttcgtttgaaaagcaaggggtccaga
aaaataatttctagtgctgcctgtgccaatggaacacttttggcctattcagatggtgtg
agaccctgcctctttgcactaagacataagggtggaaagaagtacacccttgacaaatta
gagctgccaaaaggattgccctgttctcagagtatgctgtttactgtggactcgtccaat
ttgatacttgctgggcgtaatggaaaaatatacatcattgacattgcaacaagagaaatt
tcaaatgtatttcaccctacaagaagggcagatggagcaaaaatctcaagagaaccacct
gtaacgaagatgttcctaagtgcagacgggcaatggctagctgcggttaactgctatggg
gatatttatgtatttaaccttgaggtgcaaagacaacactggttcatatcccgaatgaat
ggtggttctgttacatctggtggtttttgccctaagaacaacacacttatcataactaca
tctaaaaacgaggtgtatgtatttgatgtggaaacaaaacaactaggtgaatggtccaag
cgatatacgcaccagttgcccagaagtttccaggaatttcctggagaggtcattggccta
tcattttctccgcaaagctcgtcatcggttattgtatacagtaccagggctatgtgctac
attgattttggattgccagtagttgaggatgttgacttgccaaatggatcagctggagct
gcagagaagtcggacacaaaaaaaattaaaaaagcaaggcagaaacgtaaggcccatgat
gaagagtctaaacaagagaaaaggaataacttaagtttttttgcgtttaaagaaccagtg
ctctttgttgggcacctactggacagttcaattttaatagtagagaagcgatggatggat
gtagttgaaggttttggcgcaccggttcacagacatatatatggcacatga
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