Zea mays (maize): 103645297
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Entry
103645297 CDS
T01088
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
zma
Zea mays (maize)
Pathway
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103645297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103645297
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103645297
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
103645297
NCBI-ProteinID:
XP_020402287
UniProt:
A0A1D6KPG6
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Position
1:complement(220325019..220331362)
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AA seq
862 aa
AA seq
DB search
MRRTRSQSASGVNPPPAAGPSAEVAGRRRASPAANGKSPATKVETASPLRDARRKGRPKT
ESKDNASVKPCSAGSCEKNNLEEQTESLDNIDATEMDWEEGHVEHIEDSVELRETMTVEF
NDIPSSTKKKSVRRPSAEEKELAELVHKVHLLCLIARGRVVDKACYDTLIQASVLSLVPC
HLLWSLVDVPNLKAVNLRSLVSWFHRTFCVTAQSTDRGSFESNLAFTIQDHVGTAEEICA
LSVALFRALNLPARFVTNLDVAGLKTDTKVKGTFSQDASRLCTRALPCGSPLSGDNVISS
PALLKDNSQGSASMNQQTGDLGKLKQTSACKRSLYKTLSSIKSDHESSCASTSKDKSSSN
QFPSTSSNNAEVLKRKGDVEFELQLEMALSATAAETQNNKLATHMNQLTVSLQDSSSPLK
KLRQNVEALSSSSAVWSRSAGAPLYWAEVYCGGQASTGRWVHVDVVNNLIDAEQNVEASS
AVCKKPLRYVIAFAGNGAKDVTRRYCLQWHRIAQGRVNSEWWDNVLAPLKQMELAATNNY
EDMELQTRALTEPLPTSQQAYKDHHLYALEKWLHKNQIFHPKGPVLGFCKGHPVYPRSCV
QTLQSRHGWLREGLQVRENELPAKVVTRPKRTFNAQSVQSSGNEDGLKPTLELYGEWQLE
PLQLPHAVNGVVPKNERGQVDLWSDKCLPPGTVHLRLPRLFQVAKRLGIDYAPAMVGFDY
RSGRCLPVFDGIVVCTEFRSAILEAYAEEEEQRRAVEKKQEEAQALSRWYQLLCSIVTRQ
RLKDSYKTPSHGIGNEGLPENDNVHRSTLSSRSSEREPSSSKLQTDHDHDHEFPKEDQSF
DEETFVRTKRCPCGFSIQVEEL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggacgaggagccagtccgccagcggggttaatcctccacccgctgctggacca
agcgcggaggtcgctggtcgccggagggcttcgcctgccgcgaatgggaaatcacctgcc
accaaggtggaaacagcatccccactccgggatgcacgcaggaaaggtagacccaagact
gagtccaaagataatgctagtgtgaaaccttgcagtgctgggagctgtgaaaagaataat
ttggaggagcaaacagaatcgcttgataacattgatgcaactgaaatggactgggaagag
gggcacgtggagcacattgaggattctgttgagctcagagagaccatgactgttgagttc
aacgacataccttcttccactaagaagaagagtgttcggaggcccagtgctgaggaaaag
gagttggctgaacttgttcacaaggtccatttgctttgcctaatagcaaggggtagagta
gttgacaaggcttgctatgatacactcattcaggcctcagttctttctcttgtaccatgc
cacttactatggagtcttgttgatgttccaaacctgaaagctgttaacctacgtagtctt
gtgagctggttccatcgtactttttgtgtaactgcacaatccactgacaggggatctttt
gaatcaaatttggctttcactattcaagatcatgtagggactgctgaagagatttgtgca
ctctctgtggcattattcagggcactcaacttaccagctaggtttgttacaaatctggat
gttgctggactcaagaccgatactaaagtgaagggaacattcagtcaagatgcatctagg
ctttgtacaagggcactaccatgtggttctccattatctggtgataatgtgattagttct
cctgctctactgaaagataattctcaaggtagtgccagcatgaatcaacaaacaggtgat
cttggaaaattgaaacagacctcagcatgcaagaggagtttatataaaactttgtcaagc
ataaaatcagatcatgaaagtagctgtgcttctacatcaaaagataaatcatccagcaac
caatttccttccacttccagtaataatgctgaagtactaaaaagaaaaggggatgtggaa
tttgagttgcaactggaaatggctctttcagctactgctgctgaaactcaaaataataaa
ctagctactcacatgaatcaattgactgttagcttacaagattctagttcaccattgaag
aaattgcgtcaaaatgtggaagctttatccagctcaagtgcagtttggtcaagaagtgct
ggagctccattatattgggctgaggtatactgtggtgggcaagcatcaacaggaagatgg
gtacatgttgatgttgtgaataatctcattgatgctgaacagaatgtagaagcttcttct
gccgtttgcaagaagcctttaagatatgttattgcttttgctggaaatggagccaaggat
gtaaccagaaggtattgcttgcagtggcacagaattgcacaaggcagagtgaattcagag
tggtgggataatgttttggcgccactaaaacagatggaactggcagcaacaaacaactat
gaagacatggaacttcaaaccagagccctaacagagcctcttcctaccagtcaacaggcc
tataaggaccatcacctttatgctctcgagaagtggcttcacaagaaccaaatttttcat
cccaaaggtccagttctcggtttctgtaaaggacatcctgtttatccaagatcctgtgtt
caaacactgcagtcaagacatggatggttgcgggagggcctgcaagtccgagaaaacgag
ttgcctgcaaaggtggttacacgtccaaagaggactttcaatgcccagtcagttcaatca
agtggcaacgaagatggtctaaaaccaaccttggaactatatggtgaatggcaactggaa
ccactgcaacttcctcatgctgtgaatggcgttgtgccaaagaatgaacgaggccaagtt
gatttatggtcagataagtgccttccgcctggtactgtacacttgaggttaccaagatta
ttccaggttgcaaagagacttggcatcgactacgctcctgctatggtcggatttgattat
cgcagtggtcggtgccttccagtctttgatgggattgttgtctgtaccgagttcagaagt
gctatcctggaggcatatgcagaagaagaggagcagagacgagctgtggagaagaagcag
gaggaggctcaagcactctccagatggtatcagctgctctgctccattgtaacaaggcag
aggttgaaggactcctacaaaacaccttcacacgggattggtaacgaaggcctgcccgaa
aatgataatgtccatagaagcactctcagcagccgatcctcagaaagggaacctagttca
agcaaactgcagacagatcatgaccatgaccatgaatttccaaaggaagaccagagcttt
gatgaggagaccttcgtgaggacgaaacgctgcccgtgtggtttttctatccaagtagag
gagttgtaa
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