Zea mays (maize): 103645753
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Entry
103645753 CDS
T01088
Name
(RefSeq) LOW QUALITY PROTEIN: endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
zma
Zea mays (maize)
Pathway
zma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103645753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103645753
DNA repair and recombination proteins [BR:
zma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103645753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Rad17
Cluap1
COXG
SRPRB
Motif
Other DBs
NCBI-GeneID:
103645753
NCBI-ProteinID:
XP_008668677
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Position
2:complement(1534929..1539521)
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AA seq
877 aa
AA seq
DB search
MAATDPTSSAAATAHSGGHRSLLLQPTISLLTGGAGDQADTPGDGVSTGVGRRVRAAGPL
HRHAAGRAACEGGRVPVGRSREESERLIDQTAAAVLLPTPLDFGGVEDVSALVAAAVAGR
ALAVRELCAVGRSIRAVRAVFHQLKRLADEMPDGRYSSLVDILQGCDFLTELVQRIEFCL
DSTLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFLAGGIDNPLVTKRRSRMCV
GVKASHKHLMPGGIVLSSSGSGATYFMEPQDAVELNNREVKLSGEERAEELVVLSLLTSM
IADSQLKIRNLMDNVLELDLACARGSYALWTNSVRPTFTDSYTISQSDQCNDYSIYIEGI
RHPLLLEQSLMAEESTTEASEMPVPLDMWVKKNARIVVISGPNTGGKTATMKTLGLSSLM
SKAGIFFPAKGRPRIPWFDQVLADIGDHQSLEHSLSTFSGHISRLRKIVEMVSKDSLVLI
DEIGSGTDPAEGVALSTSILKYLASRVNLAIVTTHYADLSRLQSVDNRFENAAMEFCVET
LQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVEKLLPDKQKERQGLLYDSLVDE
KELLESQANEAASVLSQVEGLYNEIRLEADDLESRVAALRARETQKVQQELKVVKYRMDT
IIKNFEAQLKNSKLEQYNSLMRKAEAATASVVAAHQPSEIAFDDDDENRISFVSQVGDKV
YVQGLGGETMATVVETLGEDESCMVQYGKIKVRVKRSRIKLVQRGTNNEATTSSSVKAKG
RTPKQRSATTTDVSFGPVVQTSKNTVDLRGKRVSEAAFELRMAVDACRPYQVLFVVHGMG
TGAVKDCAIDVLRKHPRVARFEDESPLNYGCTVAYIQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagatcccacgtcgtcagcagccgcgacggctcacagcggcggccaccga
agcctcctcctacaacctaccatctcgctcctcaccggaggcgccggagaccaggcagat
acgcctggagacggagtcagcactggagtggggcggcgtgtgcgagcggctggcccactt
caccgccacgctgcgggccgcgccgcctgcgagggagggcgcgtccccgtcgggcggagc
cgggaggagagcgagaggctgatcgaccagacggcggcggcggtgctgcttccgacgccg
ctcgatttcggcggcgtcgaggacgtgtccgcgctcgtcgctgcggcggtcgcgggccgc
gcgctggcggtgagggagctttgcgcagttgggcgcagcatccgtgccgtgcgggcagtg
ttccaccagttgaagaggcttgccgatgaaatgccggatggaaggtactcttctcttgta
gatatactacaaggttgtgacttcttaactgagcttgttcaaaggatagagttttgcctt
gattccaccctttctcttgtcctggatcgggcaagcaaaaaactagagataatccgccga
gaaaggaggaggaacatcgaaatgttagaatctctactaaaagatacagctgcaaagatt
tttctagcaggtgggattgataaccctctggtcaccaagcgccgttctaggatgtgtgtt
ggtgtgaaagcttcacacaagcatttgatgcctggtggaatcgttctaagttccagtggc
tctggcgcaacatactttatggagccacaggatgctgttgagctcaacaacagggaagtt
aaactctcaggagaggagagagcagaggaactggtagtattgagcttgcttacctcaatg
attgcagactcccaactgaagatcagaaatttgatggacaatgttttggaattggacctt
gcttgtgctagagggtcgtatgccctatggacaaacagtgtcagaccaaccttcactgat
agttataccattagccaatcagaccagtgcaatgactattcaatttatattgagggcatt
cgccatcctcttctacttgaacagtctcttatggcagaagaatcaactacagaagcatct
gaaatgcctgttccattggacatgtgggtaaaaaagaatgcaaggatagttgtgatctct
ggacctaacactggaggcaaaactgccactatgaagaccttggggctgtcctcgcttatg
tcaaaagctggtatattcttcccagccaaaggaaggcctaggattccatggttcgatcag
gttcttgcagatattggtgatcaccagtcgctggagcacagcctctctacattcagtggg
cacatatcacgtctgcgcaagattgtagaaatggtatcaaaagattctctagttctaatt
gatgagattggcagcggcactgatccagctgaaggtgtagctctttcaaccagcattttg
aagtatcttgcaagtagagtgaatttagcaattgtgacaactcattatgctgatctaagt
cggctccagtcagttgacaaccgattcgagaatgctgcaatggaattttgtgtagaaact
ctacaaccaacataccgaatcttatggggcagtactggtaattccaatgcacttagcatt
gcaaagtcaattggttttgatcaaaaagtgcttgatcgcgcacaagaatgggttgagaaa
ctactgcctgataagcaaaaggagcggcaaggtttactttatgattctctcgttgatgaa
aaagaacttttggaatcccaggcaaatgaagctgcatctgttctttcacaggttgagggg
ttgtacaatgagattcgcttggaagctgatgatctcgaaagcagagtagctgcattgaga
gcaagagagacccaaaaggtacaacaggaattgaaggttgtgaagtatcggatggacacc
ataatcaagaactttgaagctcagctaaagaattcaaaacttgaacaatacaattcgcta
atgaggaaagcagaggctgccactgcttccgtggttgccgctcatcagccaagcgaaata
gctttcgatgatgacgatgaaaaccggatctcgttcgtctcacaagttggagacaaagtg
tatgttcaagggctgggaggagaaacgatggctaccgttgtcgaaactctcggagaagat
gagagttgtatggttcaatacggaaagataaaggttcgagtcaagagaagcaggataaaa
ctggttcaaagaggcacaaataacgaggcaacaacttcctcttctgtaaaagcaaagggc
cgaacaccgaagcagcgatcggcaacgacgacggacgtctccttcggccccgtggtgcag
acgtccaagaacacggtggatctgcgcggtaagcgggtcagcgaggcggccttcgagctc
cgcatggccgtcgacgcgtgcaggccgtaccaggtgctgttcgtggtccatggcatgggc
accggggcggtgaaggactgcgccattgacgtcctccggaagcaccctcgcgtggccagg
ttcgaggacgagagccctctcaactacggctgcaccgtcgcctacatccagtga
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