Zea mays (maize): 103645755
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Entry
103645755 CDS
T01088
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
zma
Zea mays (maize)
Pathway
zma03022
Basal transcription factors
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103645755
09124 Replication and repair
03420 Nucleotide excision repair
103645755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
103645755
03400 DNA repair and recombination proteins [BR:
zma03400
]
103645755
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103645755
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103645755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Acatn
Motif
Other DBs
NCBI-GeneID:
103645755
NCBI-ProteinID:
XP_020403624
LinkDB
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Position
2:complement(1571587..1591878)
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AA seq
457 aa
AA seq
DB search
MPQVMVVARNFMDMVAALPAGKLDMLYDSAFICEAVLRSLPPLAKKYALQMLYVLAPVTA
AAMEEWVLDEYAAKHKVAIDKLLQLRVFVEVRDRRRDVSYKMNQKFQGNMQKYLVDGGSL
PREPLPLSVTGRLPTPADLEAYALDQWECFLLQLINSSQVEKGSSFSSSMMKTFQRGLLS
SRDGEASKLTENGFQFLLMETNAQLWYIMREYISSAEERGVDPTELISFLLELSFHKLGA
AYSLNTLTDVQRIAIRDLAELGLVKQQQGRKDSWFIPTQLATNLSASLSDSSSNKEGFVV
VETNFRMYAYSTSKLHCEILRLFASLCFLSRVEYQLPNLIVGAVTKESIYGAFENGITAE
QIISFLRQNAHPRVADKIPAVPENVTDQIRLWETDLNRVEMIPSHLYEDFPSKEWFEQCC
DYARDNGYLLWEDPKRMRLIVRGEFHPEMREFLRRQR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggtaatggtggtggcacggaacttcatggatatggtggctgctcttcctgcg
ggcaagcttgatatgctctatgactcagcctttatctgtgaggcagtactcaggtcactt
cccccactggcaaagaagtatgcactgcagatgttgtatgtgctggcaccagtgaccgct
gcagcaatggaagagtgggtgcttgatgaatatgctgccaagcataaggttgccattgat
aagcttctacagctcagggtctttgttgaagtgcgcgacagacgacgggacgtgagctac
aagatgaatcagaagttccagggaaacatgcagaagtatttggttgatggtggaagttta
ccaagggaacctttaccattaagtgtcactggtcgattgcccacaccagcagatctggaa
gcctatgctcttgatcaatgggagtgcttcttgttgcaattgatcaattcatctcaagtc
gaaaaagggtcaagttttagctcctccatgatgaagacgtttcagcgtggtcttctgagt
tcaagggatggtgaagcttcaaagttgactgaaaatggcttccaatttcttctgatggaa
acaaatgcacaactttggtacataatgagagaatacatttcatctgctgaggaacgtgga
gtggaccctacggagctgatatcatttctcttggaacttagctttcataaattgggagcg
gcttatagcttgaacactctgactgatgtccagaggattgccatcagggatcttgcagaa
ttaggactagtcaaacagcagcagggtcgaaaggatagctggttcattcctacccaattg
gctactaatctttcagcaagcttgtcagattcgtcatctaacaaagagggatttgtggtt
gtggagacaaactttcgaatgtatgcatactctacttccaagttgcactgtgaaattcta
cgcctttttgcaagtttgtgttttctttcaagggtggagtatcaacttccaaacctcatc
gtaggagctgttacaaaagaaagtatctatggtgcttttgaaaatgggataactgctgag
cagataatttcatttcttaggcaaaatgctcaccctcgtgttgctgacaagatacccgct
gtcccggagaatgtcacagatcagattaggttgtgggaaactgacctcaacagggttgag
atgattccatcgcatttgtacgaagattttcctagcaaggaatggtttgaacaatgctgt
gattatgcaagggataatgggtacttgctgtgggaggaccccaagagaatgagactaatt
gtacgaggggagttccaccccgaaatgagggagttccttcgcaggcaaagatga
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