Zea mays (maize): 103648088
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Entry
103648088 CDS
T01088
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
zma
Zea mays (maize)
Pathway
zma03030
DNA replication
zma03410
Base excision repair
zma03420
Nucleotide excision repair
zma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103648088
03410 Base excision repair
103648088
03420 Nucleotide excision repair
103648088
03430 Mismatch repair
103648088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zma03032
]
103648088
03400 DNA repair and recombination proteins [BR:
zma03400
]
103648088
DNA replication proteins [BR:
zma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103648088
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103648088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
AAA_22
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
AAA_5
PTCB-BRCT
Gp44_lid
BRCT_2
AAA_24
AAA_18
RsgA_GTPase
AAA_16
Zeta_toxin
Sigma54_activ_2
AAA_14
AAA_17
NTPase_1
Mg_chelatase
AAA_33
ABC_tran
RNA_helicase
TsaE
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-GeneID:
103648088
NCBI-ProteinID:
XP_008670813
UniProt:
A0A1D6F6S7
LinkDB
All DBs
Position
2:232786477..232796639
Genome browser
AA seq
985 aa
AA seq
DB search
MSSDIRKWFMKPQDKSAAASGAAGKPSGSAAEKKPVLSIPEKKSAPPALASCDHDTSARR
KTSKYFGSKAEKDSDVQMADASGGKSAAKRKLQKCNDEVKEDSKPFPAKKMFDDEEDDDF
VAPAKKKTPVKPPPSKKLKVESNVEAPAKTTGVDDAEDEDRMDEDAKTPSKGAGRGRGRG
GRGGAGAAPGGRGRGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLDSLE
REEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFDLIRKS
KPAKAPVDKRQNNNSSEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASADKQKP
KIVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQTDSAA
KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL
INNATLNYSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQ
KLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHL
QYMSLSQSVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERMDFGMSDPDL
VPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAAC
FASSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANL
DRDALRLDYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHP
SPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPVEESLPEE
NGLASAEDDEDGSSDAENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGDGPRGKKAP
AARSRATGSGGKAAAGGGSAGKRKR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacatccgtaaatggttcatgaagccgcaggacaagagcgcggcggcatct
ggagccgccgggaagccctcggggtcggcggctgagaagaagcccgtgctcagcattccg
gagaagaagtcggcgccccccgcattggcgtcctgtgaccatgatacttccgctagaagg
aagacaagcaaatattttgggtcaaaagcagaaaaggactcagatgtccaaatggcagac
gcctctggggggaagagtgcggctaaaagaaaacttcagaaatgcaacgatgaagtcaag
gaggacagcaagccttttccagcaaagaaaatgtttgatgatgaagaagatgacgatttt
gtggcacctgcaaagaagaaaactccagtgaagccaccaccttcaaaaaagcttaaagtt
gaatctaatgttgaagcccctgcaaagactactggtgttgatgatgctgaggatgaggac
aggatggatgaagatgccaagaccccctctaaaggagctggaaggggaaggggaagagga
ggaagaggaggagcaggagctgcccctgggggcagaggtagaggaggtgggagaggtttt
atgaattttggtgagaggaaagatcctcctcacaaaggagaaaaggaggtcccagagggt
gcccctgactgtttatctggtctgacatttgtcataagtggtaccctcgacagtcttgaa
cgtgaggaagcaactgatctaattaagcgttatggtggccgtgtgactggctctattagt
aaaaagacgagctacttattggccgacgaagacattggtggagtcaaatctaacaaagca
aaagatctgggtgttccattcttgactgaagatggtttatttgatttgatccgaaaatca
aagcctgcaaaggctcctgtagacaaacgtcaaaacaacaacagttctgaaaagcttcag
aaatcacagacaaagagctctccagctaaagttgaaaaacgagccgaagcaagtgctgta
ggcaaaagtattgcttcaaacagtaatgctgcaagtgcctccgctgacaaacaaaagccc
aagattgttgaccgtggttctatgcaatggacagaaaaatatcggccaaaagttccaaat
gacatagttggcaatcaatcaatggtcaaacaacttcatgattggttaaaaagttgggat
gcactattccttcattctggccaaaagggtaagggaaagaaacaaactgacagtgcagcc
aaaaaggctgtgttgctgagtggacctcctggtatcggtaagactacaactgctaaagtt
gttagtcagatgcttggtttgcaggccattgaggtaaatgcgagtgatagccgtggtaag
gcagactccaagatcgagaagggtgttggggggagtacatcaaattctatcaaagagctt
atcaacaacgcgactctgaattatagtgacaatcggttaaaacatcccaaagctgtacta
gttatggatgaagttgatggtatgtctgctggagatagaggtggtgttgctgatcttatt
gctagcatcaagatatccaagatccctattatctgcatttgtaatgaccgttatagtcag
aaattgaagaatcttgtgaattactgccttatgctcaacttcagaaagccaacaaaacaa
cagatgggtaaaagattgatggaaattgccaaaaaggaaggtattcaagctcaagagaat
gcaatggaagagcttgctgaaagagtgcacggagatattcgcatggcactcaaccatttg
cagtatatgagcctctcccagtctgtggtcaaatatgatgatataaaggagcgacttaat
agcagttcaaaggatgaagatatttctccttttactgctgttgacaaactttttggtttc
aatggcgggaggttaaggatggatgagagaatggattttggcatgagcgatcctgattta
gttcccttgatcatccaggaaaattatatcaattatcggcctaacaccatcggcaaggat
gaaagtggagttaaaagaatgaatgctttagcccgggctgctgaatctatagcggacggt
gatcttgttaatgtacagataagaagatatcgacagtggcagctgtcacaagctgcttgt
tttgcttcatctatagtacctgccgctttgatgcatgggaacagagaaatccttgaagca
ggtgagcgaaactttaataggtttggtggatggttgggtaagtactcgactactaacaaa
aacagaaggctactggaagatgtccacagtcatattcttgcctcccagcaagcaaacttg
gacagggatgcattgaggttggattatcttactcttatcttgagagagctgactgaccca
ctgaaaaaaatgtcaaaggatgaagctgttcaaaaggtggtagagtttatggatacatac
tctttaagccaggaagacttcgatacaattgttgaagtatccaaatttaagggtcatcca
agtcctatggatgggattcaacctgctgttaaaagtgccttgacaaaggcatacaaacaa
ggaagtagttcccgtgttgttcgagcagcagatctaataaacattccaggcatgaaaaag
cctttaaagaaacgagtggcggcgatcttggagccggtagaagagagcctacctgaagaa
aatggactagcatcagctgaagatgatgaagatggttcttctgatgctgaaaataatgat
gagcttgtgcctgctgactctacgccgaagctggacctgcaaagcgacaagaagaaagga
atccaagtgcagcttgacctgaagagcaatggggatggcccgcgcgggaagaaggcgcct
gctgccaggtcaagagcaaccgggtcaggtgggaaggccgcggcgggaggaggttcggct
gggaagaggaagaggtaa
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