KEGG   Zea mays (maize): 103648088
Entry
103648088         CDS       T01088                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
zma  Zea mays (maize)
Pathway
zma03030  DNA replication
zma03410  Base excision repair
zma03420  Nucleotide excision repair
zma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103648088
   03410 Base excision repair
    103648088
   03420 Nucleotide excision repair
    103648088
   03430 Mismatch repair
    103648088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zma03032]
    103648088
   03400 DNA repair and recombination proteins [BR:zma03400]
    103648088
DNA replication proteins [BR:zma03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103648088
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103648088
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_30 AAA_22 RCF1-5-like_lid AAA_19 RuvB_N nSTAND3 AAA_assoc_2 AAA_5 PTCB-BRCT Gp44_lid BRCT_2 AAA_24 AAA_18 RsgA_GTPase AAA_16 Zeta_toxin Sigma54_activ_2 AAA_14 AAA_17 NTPase_1 Mg_chelatase AAA_33 ABC_tran RNA_helicase TsaE NPHP3_N AAA_2
Other DBs
NCBI-GeneID: 103648088
NCBI-ProteinID: XP_008670813
UniProt: A0A1D6F6S7
LinkDB
Position
2:232786477..232796639
AA seq 985 aa
MSSDIRKWFMKPQDKSAAASGAAGKPSGSAAEKKPVLSIPEKKSAPPALASCDHDTSARR
KTSKYFGSKAEKDSDVQMADASGGKSAAKRKLQKCNDEVKEDSKPFPAKKMFDDEEDDDF
VAPAKKKTPVKPPPSKKLKVESNVEAPAKTTGVDDAEDEDRMDEDAKTPSKGAGRGRGRG
GRGGAGAAPGGRGRGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLDSLE
REEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFDLIRKS
KPAKAPVDKRQNNNSSEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASADKQKP
KIVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQTDSAA
KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKEL
INNATLNYSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQ
KLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHL
QYMSLSQSVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERMDFGMSDPDL
VPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAAC
FASSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANL
DRDALRLDYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHP
SPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPVEESLPEE
NGLASAEDDEDGSSDAENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGDGPRGKKAP
AARSRATGSGGKAAAGGGSAGKRKR
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgtcgtccgacatccgtaaatggttcatgaagccgcaggacaagagcgcggcggcatct
ggagccgccgggaagccctcggggtcggcggctgagaagaagcccgtgctcagcattccg
gagaagaagtcggcgccccccgcattggcgtcctgtgaccatgatacttccgctagaagg
aagacaagcaaatattttgggtcaaaagcagaaaaggactcagatgtccaaatggcagac
gcctctggggggaagagtgcggctaaaagaaaacttcagaaatgcaacgatgaagtcaag
gaggacagcaagccttttccagcaaagaaaatgtttgatgatgaagaagatgacgatttt
gtggcacctgcaaagaagaaaactccagtgaagccaccaccttcaaaaaagcttaaagtt
gaatctaatgttgaagcccctgcaaagactactggtgttgatgatgctgaggatgaggac
aggatggatgaagatgccaagaccccctctaaaggagctggaaggggaaggggaagagga
ggaagaggaggagcaggagctgcccctgggggcagaggtagaggaggtgggagaggtttt
atgaattttggtgagaggaaagatcctcctcacaaaggagaaaaggaggtcccagagggt
gcccctgactgtttatctggtctgacatttgtcataagtggtaccctcgacagtcttgaa
cgtgaggaagcaactgatctaattaagcgttatggtggccgtgtgactggctctattagt
aaaaagacgagctacttattggccgacgaagacattggtggagtcaaatctaacaaagca
aaagatctgggtgttccattcttgactgaagatggtttatttgatttgatccgaaaatca
aagcctgcaaaggctcctgtagacaaacgtcaaaacaacaacagttctgaaaagcttcag
aaatcacagacaaagagctctccagctaaagttgaaaaacgagccgaagcaagtgctgta
ggcaaaagtattgcttcaaacagtaatgctgcaagtgcctccgctgacaaacaaaagccc
aagattgttgaccgtggttctatgcaatggacagaaaaatatcggccaaaagttccaaat
gacatagttggcaatcaatcaatggtcaaacaacttcatgattggttaaaaagttgggat
gcactattccttcattctggccaaaagggtaagggaaagaaacaaactgacagtgcagcc
aaaaaggctgtgttgctgagtggacctcctggtatcggtaagactacaactgctaaagtt
gttagtcagatgcttggtttgcaggccattgaggtaaatgcgagtgatagccgtggtaag
gcagactccaagatcgagaagggtgttggggggagtacatcaaattctatcaaagagctt
atcaacaacgcgactctgaattatagtgacaatcggttaaaacatcccaaagctgtacta
gttatggatgaagttgatggtatgtctgctggagatagaggtggtgttgctgatcttatt
gctagcatcaagatatccaagatccctattatctgcatttgtaatgaccgttatagtcag
aaattgaagaatcttgtgaattactgccttatgctcaacttcagaaagccaacaaaacaa
cagatgggtaaaagattgatggaaattgccaaaaaggaaggtattcaagctcaagagaat
gcaatggaagagcttgctgaaagagtgcacggagatattcgcatggcactcaaccatttg
cagtatatgagcctctcccagtctgtggtcaaatatgatgatataaaggagcgacttaat
agcagttcaaaggatgaagatatttctccttttactgctgttgacaaactttttggtttc
aatggcgggaggttaaggatggatgagagaatggattttggcatgagcgatcctgattta
gttcccttgatcatccaggaaaattatatcaattatcggcctaacaccatcggcaaggat
gaaagtggagttaaaagaatgaatgctttagcccgggctgctgaatctatagcggacggt
gatcttgttaatgtacagataagaagatatcgacagtggcagctgtcacaagctgcttgt
tttgcttcatctatagtacctgccgctttgatgcatgggaacagagaaatccttgaagca
ggtgagcgaaactttaataggtttggtggatggttgggtaagtactcgactactaacaaa
aacagaaggctactggaagatgtccacagtcatattcttgcctcccagcaagcaaacttg
gacagggatgcattgaggttggattatcttactcttatcttgagagagctgactgaccca
ctgaaaaaaatgtcaaaggatgaagctgttcaaaaggtggtagagtttatggatacatac
tctttaagccaggaagacttcgatacaattgttgaagtatccaaatttaagggtcatcca
agtcctatggatgggattcaacctgctgttaaaagtgccttgacaaaggcatacaaacaa
ggaagtagttcccgtgttgttcgagcagcagatctaataaacattccaggcatgaaaaag
cctttaaagaaacgagtggcggcgatcttggagccggtagaagagagcctacctgaagaa
aatggactagcatcagctgaagatgatgaagatggttcttctgatgctgaaaataatgat
gagcttgtgcctgctgactctacgccgaagctggacctgcaaagcgacaagaagaaagga
atccaagtgcagcttgacctgaagagcaatggggatggcccgcgcgggaagaaggcgcct
gctgccaggtcaagagcaaccgggtcaggtgggaaggccgcggcgggaggaggttcggct
gggaagaggaagaggtaa

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