Zea mays (maize): 103648287
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Entry
103648287 CDS
T01088
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103648287
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103648287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
INTS1_R4
zf-RING_2
PHD
Motif
Other DBs
NCBI-GeneID:
103648287
NCBI-ProteinID:
XP_008670993
UniProt:
A0A1D6FA93
LinkDB
All DBs
Position
2:242634646..242657256
Genome browser
AA seq
1771 aa
AA seq
DB search
MDPDAGGAGAGGRAGFERACRLPNTVHSEVLPSLPLPTLPRELGFDALRDDEPLAAPDRP
DMIMQAANIARILADTDVSHLGFTAADNVEVDPSRCSWLWREVLKHNPDAFKVKAPGPSS
QGPFGGPGYHNQEREKHFEHLTPNMSKTRNGSAFSQDEINSHREHFRNELTPDSVASKKP
KVRKKEINNSVSTSPHSIPNNQEVIATFCEAVEDFCGKAEIPDDGDGGDWLSIPLDDVKV
LVNEITSVRSKRILHEVPMDTVTRLLDVIDRQIRCSQGLSIDVKENSDAFDAEPLVFSAL
ESSHAALAIMTHHDMPKQLYREELIERIIDFSRHQITDCMAASNPTFRALYKPAGNVAND
GDDDEGDLENGQVSKRRRTATNLSMRKSSNRVSASVYSAVQKLCLILGFLKELLTTVRLS
DSCILQLAKTCFTTFLVDNMQLLQLKAIGVICTVFSSYTQHRSYLVDETLHLLRKLQFSK
NAVRTYHLADEDQKQIQMITALLVHLVQFSAIVPDSLKGTVDWTTIVDASSDADYYPIQC
HEAATEACCRFWTDVLQRFTAAKSQDMSETKGIIDNLVQDFLTILNLPEYPAAASILEVL
CVLLLQNAGLKSKDINARCFAIDLLGGIASRLKRDSVVCSEEKLWILQDFTDKGSDGSIF
LKNKCCVCLGGRGINIACNECGRCFHSDCMGAGSQDNLQRDSVCPLCFCKQQLNVLQSYC
QSQIKENGKKTAASASKKSAKPTEVSAVEIVQQILLSYLQEAGSQDDGNLFTRWFYLCIW
NKDDQHSQEKIIYYLARLKSKEILRDSGNGLAISRDSAKKICLALGQKNSFCRGFDKILA
LLLASLRENSPVIRAKALRAVSCIVEADPEVLGDKRVQYAVEGRFCDSAISVREAALELV
GRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTHAFVEIISRV
NDEESSVQDLVCKTFYELWFEEPTGSHKHLVADGSSVPMEIAKKTEQIVDMLRKMPNHQP
LITIIKRNLTLDFLPQSTKAAGINSSMVASIRKRCELICKRLLERILQVEEGAANEMEIH
TLPYIVALQAFCIVDPTLCIPVTDPSKFVVTLQPYLNIQVDNKSSAQLLESIIFVIDAVL
PLIRKPPQNVVEELEKDLKHMIVRHSYLTVVHACIKCLCALSKSAGRGPGLVENLVNIFY
KHLCGANSDSQLLGRSLFCLGLLLRYGYQLMLTSENQLDFPKIINLLQRKYLLKDDFSLK
VRALQTLGYILIAKPEFMLQKDMLNLIETALSSEVDYRFKIQGLQNLYEYLRDAESQLTA
ESTAKPPGQCEINGRSEVPVAAGAGDTNICGGIIQLYWSSILERCLDTNDQVRQSALKIV
EVVLRQGLVHPITCVPHLIALEMDPLEGNSKLAHHLLMNMNEKYPSFFESRLGDGLQLSF
KFFESIVSNHKMSANIKSNPIAFVKPGISRIYRLIRSNRNSRNKFVHSIVRKFESDSRSR
STVSFLVYCAEVLASLPFTCSDEPLYLIYDINRAIHLRAGGVEGNLKRWTSMSQSQEMAG
MPTLPGESHVVMQEEPGGYYDNMGDATERVNDNPCSTSDVDIAKVQGDCHDAIALQLLLK
LKRHLKVVYGLDDARCQAFSLKEPPKSGETFSRQNVSFNIGNTNLSLPSCLQDAASVYQD
FKTVLREDSMDFAVFVPSVQTRKRPTPRNTTSPTPRSMTRVRRTAAPSVTKARGGARGDD
SDDTDDDDWTGGPRVLDFSGGGRVTRQRVQV
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgacgccggcggggctggggccgggggccgggcgggcttcgagcgggcgtgc
cggctgcccaacaccgtccactccgaggtcctgccgtcgctgccgctccccaccctcccg
cgcgagctcggcttcgacgcgctccgcgacgacgagcccctcgccgcgcccgaccgcccc
gacatgatcatgcaggccgccaacatcgcccgcatcctcgccgacaccgacgtctcccac
ctgggcttcaccgcggcggacaacgtcgaagtggatcccagccggtgctcctggctctgg
agggaggtgctcaagcacaaccccgacgccttcaaggtcaaggcgcccgggccgtcttct
caaggtccatttggaggcccaggataccacaatcaagaacgtgagaagcactttgaacat
cttacacctaatatgagcaaaacacgaaatggatctgcattttctcaggatgaaattaac
tcacacagagagcattttcgtaatgaactgaccccagattcagttgcttcaaagaagcca
aaagtaaggaagaaagaaattaacaattctgtttcaacttctccccacagcattcctaat
aatcaagaagttattgctaccttctgtgaggcggtggaggatttctgtggaaaagctgaa
attcctgacgatggtgatggtggtgactggttgtcaatcccacttgacgatgttaaggtt
cttgtgaatgaaattacatctgttcgatccaaaaggatattgcatgaggttcctatggat
acagttacaaggttattagacgtgattgaccgtcagattcgatgttctcaaggtttgtcg
atagatgtgaaggaaaattctgacgcctttgatgctgaacctctggttttctctgctttg
gagtccagtcatgctgcgttggcaattatgacccaccatgatatgccaaagcaactgtat
cgggaagaacttattgagcgtattatcgatttctcaaggcatcagatcacagattgtatg
gcagcaagtaacccaacctttcgagctctctacaaaccagctggaaatgttgcaaatgat
ggagatgatgatgaaggtgatttggaaaatggacaagttagcaaaaggagacgtactgct
actaatttgagcatgagaaaatcttcaaacagagtttctgcttctgtttattctgctgtg
cagaaactatgcttgatattgggttttcttaaggaactgctcacaacagtgcgcttgtca
gatagttgtattctgcaattagcgaaaacatgctttactacattcttggtggataatatg
cagctattacaattgaaagcgattggggttatttgcacggtgttttcatcatacacacag
cacaggagttacttggttgatgaaacacttcaccttcttcgtaagttgcagttttccaag
aatgccgttagaacctaccatctagcagatgaagaccaaaagcaaatccagatgataaca
gcactgttagttcacttggttcagtttagtgctattgttcctgatagcttaaagggaaca
gttgattggaccactatcgttgatgcctctagtgatgctgattattatccaattcaatgc
catgaagcggcaacagaggcttgttgtcgtttttggactgatgtccttcaacgttttact
gctgctaaatctcaagatatgtcggaaaccaaagggataatagacaatcttgttcaggat
ttcctaacgatactaaacttgccggagtatccagctgctgcttctattcttgaggttctc
tgcgtgttgctgcttcagaatgctggattgaaatctaaggacattaatgctcggtgcttt
gctattgatcttcttggtggtattgcatcaagattaaagcgtgattctgtcgtctgtagt
gaagaaaagctttggatattgcaagatttcactgataaaggcagtgacggctcaattttt
ttgaaaaacaagtgttgcgtttgtcttggtggaagaggcataaatatagcctgtaatgaa
tgtggaagatgtttccattcagattgtatgggggctggtagtcaggataacttacagcgt
gatagtgtctgccccttgtgtttttgcaaacaacagctcaatgtgctacagtcgtactgc
cagtcacaaattaaagaaaatggcaaaaaaactgctgcctctgccagtaagaaatctgct
aaaccaactgaggtgtcagcagtggaaattgttcaacaaatactactgagttatctccaa
gaagctggttcacaagatgatgggaacctgtttactcgatggttctatctgtgcatctgg
aacaaagatgaccaacattctcaggagaagatcatttactatcttgctagattaaaatcc
aaggagattctgcgagattctggcaatggtctggcaatttccagagattcagcaaagaaa
atttgcttggcacttggtcagaagaactcattttgtaggggttttgataaaattcttgcc
cttcttttggctagtttgagagaaaattctcctgtaataagagcaaaagcattacgtgcg
gtcagctgtatagttgaagctgatcctgaggtcttgggtgacaaacgtgtccaatatgct
gttgaagggagattttgtgattcagctatttctgttcgtgaagctgcccttgaacttgtt
gggaggcatattgcttcacatcctgatgtgggcctgaagtatatagaaaaagttgctgag
cggataaaggacactggagtcagcgttcgcaagcgtgcaatcaaaattataagggatctt
tgtgcttcaaatccgaacacggacacaactcatgcctttgtggagataatttctcgtgtt
aatgatgaggagtccagtgtacaggatcttgtatgtaaaacattttatgaactatggttt
gaagaaccaactgggagtcataagcacttggttgctgatggaagttcagttccaatggag
atagctaaaaagactgagcaaattgttgacatgttgaggaagatgcccaatcaccaaccc
ctgattaccatcataaaacgtaacttgactcttgatttcctccctcagtcaaccaaggct
gcagggattaactcatccatggtggcatcaattcggaagcgttgtgaattgatatgcaaa
cgcttattagaaagaatattgcaggttgaggagggagctgctaatgagatggaaatccac
acactaccttatattgttgccttgcaagcattctgtattgttgatcccacactctgcatt
ccagtaactgatccttctaagtttgttgtgacactgcaaccataccttaatattcaggtt
gacaataaatcatctgcccagttgcttgaaagtattatttttgtgattgatgctgttctt
ccactcataaggaagccaccacaaaatgttgttgaagaacttgagaaggatctgaaacat
atgatagttcgccattcgtatttgacagttgtacatgcctgtatcaagtgcctttgtgct
ctgagcaagtcagcaggtagaggtccaggattagtggaaaaccttgttaatattttctac
aagcatctgtgtggagctaattcagatagtcagctgttgggtcgatcactgttttgtctt
ggactcctccttcggtatggttatcaattgatgctaacatctgaaaatcagcttgatttt
cccaagatcatcaacttgctccagagaaaatatcttctcaaggatgatttcagcttgaag
gttcgagctttgcagactttgggatacatacttattgcgaagcctgaatttatgctacaa
aaggatatgttgaatctcatagagacagcactctcttctgaggttgattatagattcaag
attcaaggacttcaaaacctctacgagtatcttagagatgctgaaagccaacttactgct
gagagtactgcgaaacctcctgggcagtgtgaaataaatggcagaagtgaagtgcctgtt
gctgctggtgctggagacaccaacatatgtggtggtattatccaattgtattggagttct
attcttgaaaggtgcttggatacaaatgatcaagttcgccagagtgcacttaagattgtt
gaagttgtacttcgtcagggtttagtccaccctattacctgtgtacctcaccttatagca
cttgaaatggacccgctggaggggaattcgaagttggctcatcatctcttgatgaatatg
aatgaaaagtacccttcattttttgaaagtcgcttgggtgatggactgcaattgtcattt
aaattctttgaatccatagtcagcaaccataagatgtccgcaaacataaaatcaaatcca
attgcatttgtcaaacctggcatatctagaatataccgtcttatccgttcaaatcgaaat
tctagaaacaaatttgtccactcgatagttcggaaattcgagtctgatagccggagtcgc
agcacagttagctttcttgtatactgtgctgaagttctcgcctctctgcctttcacatgc
tctgatgaaccactttacttgatctatgatataaatcgagctattcaccttagagctgga
ggagtcgagggcaatttgaaaaggtggacttctatgtctcagtctcaagagatggcgggt
atgccaaccttgccaggagagagtcatgttgtcatgcaagaagagcctggcggatattat
gataacatgggagatgccactgaaagggtgaatgacaatccttgcagtacttcagatgtg
gacattgccaaagttcagggagattgccatgatgcaatagccctccagctacttctgaaa
ttgaagagacatttgaaagttgtttatggtttagatgatgcccgctgtcaggcattttcc
ctgaaggagcccccgaaatctggagaaacattctccaggcagaatgtttcttttaatatt
ggcaacactaacctcagtctgccgagctgcctgcaggacgcagcctctgtttaccaggat
ttcaagacagtgcttcgcgaagattccatggactttgctgtgttcgtcccttcagtccag
actaggaagcgcccaaccccaagaaatacaacgagcccaaccccaagaagtatgacgaga
gtcaggagaacggctgccccgagtgttacaaaagcccgtggtggtgcacgtggcgacgat
tccgacgataccgatgacgacgactggaccgggggtccaagagtgctagacttcagtggg
ggcggccgcgtgacaaggcagagggtccaagtatga
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