Zea mays (maize): 103649923
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Entry
103649923 CDS
T01088
Name
(RefSeq) DNA excision repair protein CSB
KO
K10841
DNA excision repair protein ERCC-6
Organism
zma
Zea mays (maize)
Pathway
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103649923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
103649923
03400 DNA repair and recombination proteins [BR:
zma03400
]
103649923
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103649923
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103649923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
103649923
NCBI-ProteinID:
XP_008673826
UniProt:
A0A1D6MP35
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All DBs
Position
3:complement(32344069..32349511)
Genome browser
AA seq
1198 aa
AA seq
DB search
MDEEDDDQRLLHSLGVTSANIEDIEKKILSQVQTEPKRDDEPGAAVDDPSGSSVAPEFDA
QANLHQKLRSVQLEIDAVASTIKRAKNASVDGQDKKKQKQANHTSQDEPHGGALQQALAT
ERLKSLKKAKAQIQKEILQSDPYPSGSDNRKDKMLAMLVEEEPRRKKKSLMPARGPKKTS
APRLKTMSYDDDDDFDAVLDGASAGFMETEREELIRKGLLTPFHKLKGFEKRVELPGPSH
RQNDPSEQAEEAIEASRIARVAQSMQQIAQSRPTTKLLDPESLPRLDAPTAPFQRLGRPL
KRPVPPSSEGRERKRQRNKTKRPLPDKKWRKANSRKESLLETDGEDVGDFATSVSEDDDQ
AAEGGLSPVILEGGLRIPGTIYEQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQV
LSFLGSLHNSGMYKPSIVVCPVTLLQQWQREASRWYPKFKVEILHDSANGSSKKSKAYSD
SDSEGSWDSDQEEVRRAKPAKKWDDLISRVVNSGSGLLLTTYEQLRILGEKLLDIEWGYA
VLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVF
ETEFSVPITVGGYANATPLQVSTAYRCAIVLRDLIMPYLLRRMKVDVNAQLPKKTEHVLF
CSLTAGQRSTYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGN
PERSGKMKVVEQVLKVWKDQGHRVLLFTQTQQMLDILENFLTACDYQYRRMDGLTPAKQR
MALIDEFNNTDEIFVFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQT
RDVMVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMKDLFTLQDDEGNG
STETSNIFGQLSKDVNVGVPNDGQQHQVHIASALSSTSEAEPSNGGNSKVDDNSDQADEE
SSILKSLFGAQGIHSAINHDAIMDANDDQKVRLEAEASQVAQRAAEALRQSRMLRSHDSF
AVPTWTGRSGAAGAPSSVRRKFGSTVNSQLIPSSQPSETSSSRNRSLPVGALSGKALSSA
ELLAKIRGTREASASDALEHQLNVGSSSNLVSSPSGNGGRASNPPNRSMIVQPEVLIRQL
CTFIQHNGGSATSTSITEHFKSRIQSKDMLLFKNLLKEIATLQRGAEGSVWVLKPDYT
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaggacgacgaccagcgcctgctgcacagcctcggcgtcacgtccgccaac
atcgaggacatcgagaagaaaatcctctcgcaggtccaaactgaaccgaagcgcgatgac
gagccaggagcagccgtcgatgaccccagcgggagtagtgttgcgcctgagtttgatgcg
caggccaatctgcaccagaagctgcgttccgtgcaactcgagatcgatgccgtagcttcc
accattaaaagagctaagaacgccagcgttgatggacaagataaaaagaagcagaaacaa
gccaatcacacttctcaggatgaacctcatggaggagcgctccagcaggctcttgccact
gagcgccttaaaagcctcaagaaagctaaagctcagattcagaaagagatattgcagtcg
gacccctacccatctggctcggacaacaggaaagataaaatgctagccatgctggttgaa
gaggagccaaggcgtaagaagaagtcgctaatgccggctcgagggcctaagaaaacgtca
gctcctagactgaaaaccatgagttatgatgacgacgatgacttcgatgcagtgcttgat
ggggcttctgcaggatttatggaaacagaaagggaagaactaatcaggaagggcttgctg
acaccatttcacaaattgaagggctttgagaagcgtgttgaattacctggaccttctcat
aggcaaaatgatccctccgaacaagctgaagaagcaattgaagcttccaggattgctaga
gtcgctcagtcaatgcagcaaattgcacaaagtcgccctacaacaaaattgcttgatcca
gaatctttacctaggctggacgcacctactgctccatttcaaaggcttggaagaccccta
aaacgccctgtacctcctagttcagaaggacgggaaaggaagagacaaaggaataagacc
aagaggcctttgcctgacaagaaatggagaaaagccaattcaaggaaggaatcactattg
gaaactgatggtgaggatgttggggactttgcgacatcagtttctgaggatgatgatcaa
gcagcagaaggtggattatctcctgttattcttgaaggtggtttgagaattcctggcaca
atttatgaacagctatttgattaccaaaaagtgggagtgcagtggctgtgggagttacac
tgtcaaagagccggtggaattattggagacgaaatgggcctgggaaaaactgtgcaagtt
ctatcatttcttggttctttgcataacagcggcatgtacaagcccagcatcgttgtttgt
cctgtaacacttcttcaacagtggcaaagggaggccagtaggtggtatccaaaattcaag
gtggaaatcttacatgattctgcaaatggttcgagtaaaaagagcaaggcatatagtgat
tctgacagcgaaggttcttgggatagtgatcaggaagaggttagacgtgcaaagcctgca
aagaagtgggatgacttgatttcacgggtagtaaattcgggatcaggtttgcttttaacc
acatatgagcagctaagaatcttaggggagaagttgcttgatatagaatggggatatgct
gtgttggatgagggtcatcgtataaggaaccctaacgctgagataacgctggtgtgcaag
caactgcaaactgtgcacaggataatcatgacaggtgcacctattcaaaataaactttct
gagctctggtctcttttcgatttcgtgttcccagggaaactaggtgtgctgcctgtattt
gagactgaattttctgtgccaattactgttggtggttatgctaatgcgacaccattgcaa
gtgtcaacagcatacagatgcgctattgttcttcgtgatcttatcatgccatatcttctt
agacggatgaaagttgatgtcaatgcacagctccccaagaaaacagagcatgttcttttt
tgtagtctaactgcagggcagcgttctacttatcgtgcttttcttgctagttcagaggtg
gaacaaatatttgatggcaatagaaattcactgtatggtatagatgtcctaaggaaaata
tgcaatcatcctgatctactcgagagagaacatgctgctcagaatcctgactatgggaat
cctgaaagaagtggaaagatgaaagtagttgagcaagttctcaaagtctggaaggaccaa
ggtcaccgagttcttctgttcactcaaactcaacaaatgcttgacattttagagaacttc
ctgacggcctgtgactaccaataccgaagaatggatggactaacacctgcaaaacaaagg
atggcactaattgacgagttcaataacacagatgaaatctttgttttcattctgaccaca
aaagttggtggtttgggtacaaacttgactggcgcaaacaggattattatttatgacccc
gactggaacccttcaacagacatgcaggccagagaacgtgcatggcgaattgggcaaact
agagatgtaatggtttacagactgatcacacgtgggacaatagaggagaaagtctatcat
cgacagatatacaagcatttccttaccaacaaagtactgaaaaaccctcagcagaggaga
ttctttaaagccagagacatgaaggatttattcacactacaagatgatgaagggaatggt
tcaactgaaacgtcaaatattttcggccaattgtccaaagatgtgaacgttggagttcca
aatgatggtcaacagcatcaggtacatattgcttcggctttgtcaagcaccagtgaagct
gaaccatctaatggtgggaacagtaaagtggatgataactctgaccaagcagacgaagaa
tcgagcattttgaagagtctttttggtgctcaaggcattcatagtgcgatcaatcatgat
gccataatggatgctaacgatgaccagaaagtgcgcttagaagcagaagcttcacaagtg
gcacaaagggcagctgaagctttacgtcaatcgcgaatgctcagaagccatgacagtttt
gctgttcccacatggaccggaagatctggtgctgctggggcaccctcctctgttcgcagg
aagtttgggtccacagttaacagccagttgatcccttcctcacagccatcagaaacgtcc
agcagcaggaatcgaagtcttccagtgggtgctctgagtggcaaggcactgtcatctgct
gaacttctggctaagattcgtggaacccgagaggcatctgcttcagatgcattggagcat
caactcaacgtaggatcatcttccaatcttgtatcaagtccatctgggaatggtggccgt
gcatctaaccctcctaacagaagcatgatcgtgcaacctgaagtcctgatccgccagttg
tgcaccttcattcaacataacggtgggtctgccacctccacgagcataacggaacacttc
aagagtcgcattcagtccaaggatatgcttctcttcaagaacctgctgaaggagatagca
actttgcaaagaggcgcggaaggttctgtgtgggtgctgaaacctgattacacgtga
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