Zea mays (maize): 103654318
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Entry
103654318 CDS
T01088
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103654318
Enzymes [BR:
zma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103654318
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
103654318
NCBI-ProteinID:
XP_008679383
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Position
4:191520908..191525928
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AA seq
706 aa
AA seq
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MAAAAASDAARSSMPRMAGAAVILLVAVGAATVLHLAAAAAVVVPPPDDAGQHGVTVSVN
QRQVTVDNGVVQVTLSTPQGHIISVRYNGGQQNLLYYYTRGGNTGGYWDVFWDYPGSGRR
PGMIDMLDGSELRVVSSSEEKVELSFRSDYNPSLPNSVRLNIDKRFVMLRGSSGFYCYAI
LEHASGYPALSVAEARIAFKLNAAMFSYMAISDDIQRYMPSEADRVAPRGAPLAYKEAVL
LVDPVEPQFRGEVDDKYQYSLDNRDNAVHGWISGGRTGTTTSPAVGFWVITPSNEFKSGG
PMKRELTSHVGPTSMAVFLGKHYTGNDIMLSLGDGEYWKKVLGPVFIYLNSKSNPGGGGE
GDLRALWDDAKAQARAEAGKWPYSFPESPDYAKAGDRGTVTGTLLVRDAFGSNGGGGGTD
VPAAAAFVGLAAPGGQPGSWATQCKGYQFWTRAAADGRFSIAGVRAGTRYGLYAWVPGFL
GDYAHASTVAVAPGGAVDLGSLLFAPPRSGPTLWEMGVPDRTAAEFFVPDADPRYASKLF
LGEHKYRQYGLWERYAELHPAGSDLVFTVGQSDYSKNWFFAHVTRMVGNVSTPTTRQIRF
SLDHVVANGTYTLRIALAAAQMSRLMVRVNGRASREAVFRTPEFGDGNAIARHGIHGGVQ
WIFEFPIRGYLLRGGENSISITQTMAFGPFLGVMYDYIRMEGPPPA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccgccgcgtctgatgctgcgaggtcgtcaatgccgcggatggcgggggcg
gccgtcatcctgctcgtcgccgttggagcggcgaccgtactgcacctggccgccgccgcc
gcagtcgtcgtcccgccgccggacgacgcaggccagcatggtgttacagtaagcgtcaac
caacgccaggtaactgtggacaacggcgtggtgcaggtgacgctgtcaacgccccagggg
cacatcatcagcgtccgctacaacggcgggcaacaaaatcttctctactactacacccgc
gggggcaacactggagggtattgggacgtgttctgggactaccccgggtcaggtcgtcgg
ccaggaatgatcgacatgttggacggttcagagttgagggtagtatcctcaagcgaagag
aaagtggagctttccttcaggagtgactacaatccatcgctcccaaacagcgtcaggctg
aacatcgacaagaggtttgtgatgctgagaggcagctccggcttctactgctacgccatc
ttggagcacgccagcggctaccctgctctcagcgtcgccgaggcccggatcgccttcaag
ctcaacgcggccatgttcagctacatggcgatctcagacgacatacagaggtacatgccc
agcgaggcagacagggtcgcgccacgtggtgctccactggcctacaaggaggccgtcctg
ctggtggaccccgtggagccacagttcaggggggaggtggacgacaagtaccagtactcg
ctggacaacagggacaacgccgtccatggctggatcagcggcggccgcaccggcaccacc
accagcccggccgtgggcttctgggtcatcacgcccagcaacgagttcaagagtggcggc
cccatgaagcgggagctcacgtcccacgtcggacccacctccatggccgtgtttctcggg
aagcattacactgggaacgacataatgctgagcctaggcgacggcgagtactggaagaag
gtgctgggcccggtgttcatctacctcaactccaagtccaaccccggaggcggcggcgag
ggcgacctccgggctctctgggacgacgccaaggcgcaggcgcgagcggaagccggcaag
tggccgtacagcttcccagagtcgccggactacgccaaggcgggcgacaggggcacggtc
accggcacgctcctggtcagggacgcgttcgggagcaacggcggcggcggtggcactgac
gtgcctgctgcagcggcgttcgtcgggctcgcggcgcccggcgggcagcctggctcctgg
gcgacgcagtgcaagggctaccagttctggacgagggcggcggccgacggccggttcagc
atcgccggcgtccgggccggcacgcgctacggcctctacgcatgggtccccgggttcctc
ggagactacgcgcacgcctccacggtggccgtggcgccaggcggcgccgtggaccttggc
agcctcctgttcgcgccgccgcggtcgggcccgacgctgtgggagatgggcgtcccggac
cggacggcggcggagttcttcgtccccgacgccgaccccaggtacgccagcaagctcttc
ctcggcgagcacaagtacaggcagtacggcctgtgggagaggtacgccgagctgcatcct
gctggaagtgatctggttttcaccgttggtcagagcgactactccaagaactggttcttc
gcacatgtcacaaggatggttggcaacgtcagtacgccgacgacacggcagatacgcttc
agcctcgaccatgtcgtggcaaacggcacctacaccctgcgcattgctcttgcagctgcc
cagatgtccaggctcatggtgcgcgtgaacggtagggcgagcagggaagccgtgttcagg
acgcccgagttcggcgacggcaacgccatcgcgcggcacggcatccacggcggcgtgcag
tggatcttcgagttccccatcagaggctacctgctgcggggaggcgagaacagcatcagc
atcacacagacaatggcgttcgggccattcttgggggtcatgtacgactacatcaggatg
gaagggccaccgccggcatga
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