Zea mays (maize): 109942419
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Entry
109942419 CDS
T01088
Name
(RefSeq) homeobox-leucine zipper protein ROC8
KO
K09338
homeobox-leucine zipper protein
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
109942419
Transcription factors [BR:
zma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
109942419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109942419
NCBI-ProteinID:
XP_020399989
LinkDB
All DBs
Position
9:10319179..10323507
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AA seq
699 aa
AA seq
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MDFGDEPEGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIK
FWFQNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVAEDFFDE
QKLRMENARLKEELDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMPGQGLGGPSL
DLDLLSGCSSGLPYHMPAPVTEMERPMMVDMATRAMDELIRLAQAGEQIWVQGMPGDARE
VLDVATYDSLFAKPGGAFRPPEINVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVS
KAQTVDVLVNGLCGRSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLD
GQRDAHYGVPSRSRRMPSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAF
GAHRWLAALQRACERFASLATLGVPHHDVAGVTPEGKRSMMRLSQRMVSSFCASLSSSPL
QRWTLLSGTTDVSVCVSTHRSTDSGQPNGVVLSAATSIWLPVPGDHVFAFVRDENARSQW
DVLSHGNQVQEVSRIPNGSNPGNCISLLRGLNANQNSMLILQESCADASGALVVYSPIDI
PAANVVMSGEDPSGIPLLPSGFAILPDGRPGSSGAGASSSAVPLAAAPPPPGCVVTVAFQ
ILVSNLPSSRLNAESVATVNSLIGTTVQQIKAALNCAGP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggcgacgaacctgagggctccgacagccagcgccagcggaagcggtaccac
cgccacaccccgcgccagattcagcagctcgaggcgatgttcaaggagtgcccgcacccc
gacgagaaccagcgcgccgcgctcagccgggagctcggcctggagccgcgccagatcaag
ttctggttccagaaccgccgcacccagatgaaggcgcagcacgagcgcgcggacaactgc
ttcctgcgcgcggagaacgacaagatccggtgcgagaacatcaccatgcgcgaggcgctc
aagaacgtcatctgccccagctgcggcggcccgcccgtcgccgaggacttcttcgacgag
cagaagctccgcatggagaacgcccgcctcaaggaagagctggaccgggtgtcgagcatc
acgtccaagtacctcggccggccgttcacgcagatgccgccggtgccgaccatgtccgtg
tcgtcgctggacctgtccgtgggcgggatgcccgggcagggcctcggcgggccgtcgctg
gacctcgacctcctcagcggttgctcgtccgggctgccgtaccatatgccggcgcccgtg
acggaaatggagcgccccatgatggtggacatggcgacgcgcgccatggacgagctcatc
cggctcgcgcaggccggcgagcaaatctgggtccagggcatgcccggggacgcgagggag
gtgctcgacgtcgccacctacgacagcctcttcgccaagcccggcggcgcgttccgccca
ccggaaatcaacgtcgaggggtccagggactcgggcctcgtgttcatgagcgccgtcgcg
ctcgtcgacgtcttcatggacacgaataagtggatggaattcttccccggcatcgtgtcc
aaggcgcagaccgtcgatgttctcgtgaacggcttgtgtgggaggagcgagtccttgatc
atgatgtacgaggagctgcacatcatgacgccggtcgtcccgactcgcgagctgagcttc
ctgcgctactgcaagcagatcgaacaggggctgtgggccgtcgccgacgtctccctggac
gggcagcgcgacgcccactacggggtgccgtcccgctcccgtcgcatgccgtcggggtgc
ctcatcgccgacatgtcgaatggctactccaaggtgacctgggtcgaacacttggagatc
gagcacatgctcccgatcaacgtcctctaccgcaacctcgtgctgagcggcgccgcgttc
ggggcgcaccgctggctcgccgcgctgcagcgtgcgtgcgagcggtttgcgtccctggcc
accctcggcgtgccgcaccacgacgtcgccggagtgacgccggaggggaagcggagcatg
atgaggctgtcgcagcggatggtgagcagcttctgcgcgagcctgagctcgtcgccgctg
cagcggtggacgctgctctccggcaccacggacgtgagcgtctgtgtctccacgcaccgc
agcacagactccggccagcccaacggcgtcgtcctcagcgccgccacctccatatggctg
cccgtccccggcgaccacgtcttcgccttcgtccgcgacgagaacgcgcgctcccagtgg
gacgtcctgtcgcacggcaatcaggttcaggaggtgtcgcgcatccccaacggctccaac
cccggaaactgcatctccctgctgagagggctgaacgcgaaccagaacagcatgctgatc
ctccaggagagctgcgcggacgcgtccggggcgctggtggtgtactcgccgatcgacatc
ccggcggcgaacgtggtgatgagcggcgaggacccgtcgggcatccctttgctgccgtcg
ggcttcgccatcctgccggacgggcggccggggtcgtccggcgcgggcgcgtccagcagc
gccgtcccgctcgcggcggcgccgccgcctccgggctgcgtggtcaccgtcgcgttccag
atcctcgtcagcaacctgccgtcgtccaggctcaacgccgagtccgtcgccaccgtcaac
agcctcatcggcaccaccgtgcagcagatcaaggcggcgctcaactgcgccggcccttga
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