KEGG   Zea mays (maize): 118471938
Entry
118471938         CDS       T01088                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
zma  Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:zma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zma03400]
    118471938
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    118471938
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 Helicase_C zf-C3HC4_4 DEAD Prok-RING_4 zf-RING_5 RING_XB3-XBAT31 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 118471938
NCBI-ProteinID: XP_035823203
LinkDB
Position
4:108958335..109001072
AA seq 1034 aa
MVKEREEQVAIVRMVLGEGTPEMDIIRALHMAGDDPTKAINILLDLNKAAPPLPPSPSPF
PCPSPSPSPGKPAKALVDSTPPCKAPTRPMPTAEKPKSTTSNGGSEEHWWLVGSAEMVGL
STCKGRRITSGDVVTFSFPNATTAVGKSRPSRPALASCSSEIMRFSTPSHGEVGRIPNEW
ARCLLPLLKENKLKVKGSCKSAPEVLTIMDTVLLSVSIYINSSMFHDQKQSSPKAARFAP
DDSTFHPLPALFKLIGLAPFIKAAFTPEDLYSRKRPTETKSSIGSPAAKLTSGRLRLSSD
GNEDDHGEETVSDSDLDDIIGISDSCALEERAPPDSLMCDLRSYQKQALHWMLQLEKGSS
SQDAATTLHPCWEAYKLEDKRELVLYLNVFSGDATTEFPSTLQLSRGGILADAMGLGKTI
MTIALLLSDSSKGCITTQNAAQTPREASGLGESHDAVKKLANPFSFSKHKKPKAPLIGGS
NLIICPMTLISQWKAEIEAHTKPGTANIYVHYGQNRPKDASIIGQSDIVLTTYGVVSSEF
SIDGSTENGALYSVHWFRVVLDEAHMIKSSKSLISLAAAALTADRRWCLTGTPIQNNLED
LYSLFRFLKVEPWRNWALWNKLVQKPYEEGDERGLKLLQSILKPIMLRRTKNCTDKEGRP
ILNLPPANIEVKYCVLSEAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQ
CCDHPFLVMSRGDTKEYADLNKLAKRFLRGGNGAVNGDSCIPSRAYIEQVVQELQKDEGE
CPICLEAFEDAVLTPCAHRLCRECLLSSWRSATAGLCPVCRMSMSKQDLITAPTDNRFQI
DVEKNWVESSKISALLQELEALRSSGAKSIVFSQWTAFLDLLQIPLSRNNFSFARLDGTL
NLQQREKVIKEFSEDKGILGAQTTQAAATPHTKHIQSHRCRAQYKVRATPTSLDGPHTAK
RTRRHLHLKPGSEGGLRCAIVAMPQHTHTLGNNDSSPAILIQHPPPVFARPPKQFRPEEG
VSPHVIVAEPLPLT
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggtgaaggagcgggaggagcaagtggccattgtgcgcatggtgcttggcgagggtaca
ccggagatggacatcatccgtgctctccacatggccggcgacgaccccaccaaggccatt
aacatcctcctcgacctcaacaaggctgcgccacctctcccgccgtcgccgtctcccttt
ccctgtccatcgccctccccttcgccggggaaacccgccaaagccctcgtcgactcaacc
ccaccatgcaaagcccctacccggcccatgcccacggcagagaaacctaagtccactaca
agcaacggtggcagcgaggagcactggtggctggtggggagcgccgagatggtggggctg
tccacctgcaagggaaggcgaattacctcaggggacgtggtcaccttcagcttccccaat
gccacaaccgccgtgggcaagagccgtccgagccgtcccgccctagcttcctgctcctcc
gagatcatgcgcttctccaccccgagccacggggaggtgggtcgcatccccaatgagtgg
gcaaggtgcctccttccccttctcaaagagaacaagttaaaagtcaagggctcgtgcaaa
tcagctcccgaggtgcttaccattatggacactgtcctcttgtcagtgagtatatatatc
aacagctcaatgtttcatgatcaaaagcaatcgtcacccaaagcagctcgatttgctcca
gatgactccacatttcaccccctacctgcacttttcaaattgataggacttgctcctttt
attaaggccgcttttactccagaagatctttattccaggaagcggccaactgaaacaaag
agcagtatagggtctcctgctgcaaagctgacatccggcagattgaggttgtcttctgat
ggaaacgaagatgatcatggtgaagaaactgtttcagattcagatttggatgatataatt
gggatctcagacagctgtgcactagaggaaagggctccccctgattctctgatgtgtgat
ctacgctcttatcaaaagcaggcacttcattggatgctgcagcttgagaaaggtagttct
tcccaggatgccgctacaacccttcacccttgttgggaagcatacaaacttgaggataag
agggaactcgttttgtacttgaacgtgttttcaggcgatgctacaactgaatttcctagt
acattacaactttctagaggaggaattctggcagatgcaatgggactggggaagactatt
atgacgatagctcttcttctttctgattctagcaaaggatgcatcacaactcagaatgct
gctcagacccctagagaagctagtgggttgggtgaatcgcatgatgctgtgaagaagctt
gctaaccctttctcttttagcaaacacaagaaacctaaggccccacttattggaggaagc
aatctaattatctgtccaatgacactaattagtcagtggaaggcagagattgaagctcat
actaagccaggcactgcgaatatatatgttcactatggacaaaacaggccaaaagatgca
agcatcattggtcagagtgatattgtcctgactacatatggtgttgtgtcatcagagttt
tcaatcgatggttcaacagaaaatggggctttgtactctgtacattggttcagagttgtg
cttgacgaagcacacatgataaaatcttctaaaagtttgatatccctagctgcggctgct
ctgactgcagatcggcgctggtgtctcactggtacaccaattcagaacaatttggaggat
ttatacagccttttccggtttctgaaagttgaaccatggaggaactgggctttgtggaat
aaacttgtacagaaaccatatgaagaaggtgatgaaaggggcttaaagctactgcagtcc
attttgaagccaataatgctgagaaggactaaaaattgcacagacaaggagggcaggcca
atccttaatttaccccctgcaaacattgaagtaaaatactgtgttttatctgaggctgag
aaggatttctatgaagctctatttcgaagatctaaggtaaaatttgatcaatttgttgag
caaggaagggttctgcacaactatgcttcaattttggagttacttttgcgcctaaggcaa
tgctgtgatcatccattccttgttatgagtcgtggggatacaaaagagtatgcagaccta
aacaagcttgcaaagcgttttctgcgtggtggtaatggtgctgttaatggtgattcttgc
atcccctctagagcttatatcgaacaggttgtccaagaattgcaaaaggatgaaggggag
tgccctatttgtcttgaagcctttgaggatgcagtattaactccctgtgctcatcgttta
tgccgagagtgtctcttatctagttggcggagtgcgacagcaggcctttgtcctgtctgt
agaatgtcaatgagcaagcaggaccttataactgctcctactgataaccgctttcaaatc
gatgtcgaaaaaaattgggttgaatcttccaagatatctgctctcctgcaggagttggaa
gctcttcgcagttcaggcgccaagagtatcgtgtttagccagtggactgcttttttagat
ctgttgcaaattccactttctaggaataatttctcatttgctaggctggatgggacgttg
aatcttcagcaaagggagaaagttataaaggagttctcagaggacaaaggcattttggga
gcccaaacaacacaagcagcggcaaccccacacacaaagcatatccagagtcatcgttgc
cgagctcaatacaaggtacgagcaactccgacttcgctagacgggccgcacacagccaaa
agaacacgacgacacctacaccttaaacctggctcagaaggaggactgagatgcgccatc
gttgccatgcctcaacacacccacactctaggcaacaacgattcttcaccagcgatcttg
atccaacacccacctccggtttttgcccgacctccaaaacaattcagaccagaggaaggg
gtttcgcctcatgtcatcgttgccgagccacttcccctaacgtga

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