Zea mays (maize): 118472117
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Entry
118472117 CDS
T01088
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118472117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
118472117
03400 DNA repair and recombination proteins [BR:
zma03400
]
118472117
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118472117
Transcription machinery [BR:
zma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
118472117
DNA repair and recombination proteins [BR:
zma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
118472117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-GeneID:
118472117
NCBI-ProteinID:
XP_035815213
LinkDB
All DBs
Position
5:218307084..218317144
Genome browser
AA seq
339 aa
AA seq
DB search
MVREEITGSTQTLEWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGEIEGT
CITRAKFGNVPHEYSTIVGIEESIQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQD
IILPPSVEIVDTTQPIANLREPVDFCIELQIKRDRAYHTELRKNSQDGSYPIDAVFMPVR
NVNYSIFSCGNGNEKHEILFLEIWMNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTSFE
ENKNRLTPPLLTFQKRFTNLKKNKKGIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLS
KTEEDLMQINSFRMEDGKLIWDTLEKHLPIDLPKNKFSL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagaagagataacaggatccactcaaacactagagtggaagtgtgttgaatca
agagtagatagtaaacgtctttattatggtcgtttcattctgtctccgcttagaaaaggt
caagcggatactgtcggtattgccttgcgaagagctttacttggagaaatagaaggaaca
tgtatcacacgcgccaaatttgggaacgtgccacatgaatattccacaatagtaggtatt
gaagaatccatacaagaaattttactaaatttgaaagaaattgtattgagaagtaatctc
tatggagttagagacgcatcaatttgcgtcaaaggtcctagatacataaccgctcaagat
ataatcttaccgccttccgtagaaatcgttgatacgacacaacctatagctaacttgaga
gaacccgttgatttctgtattgagttacagatcaagagagatcgcgcatatcatacggaa
ctcagaaagaactctcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aatgtgaattatagtattttttcttgtgggaatggaaatgaaaaacacgagatacttttt
ttagaaatatggatgaatggaagtttaactcctaaagaagcgctttatgaagcttctcgt
aatttgattgatttatttcttccttttctacacacagaggaagagggcactagtttcgaa
gaaaataaaaacaggttaactccaccccttttaacctttcaaaaaagattcactaatcta
aagaaaaacaaaaaaggaattccattgaattgtatttttattgatcaattagaattgcct
tctagaacgtataattgtctcaaaagggccaatatacatacactattggaccttttgagt
aagactgaagaagatcttatgcaaattaatagttttcgtatggaagatggaaaactgata
tgggacactctagagaagcatctcccaattgatttacctaagaacaagttctcgctttaa
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