Zea mays (maize): 118475062
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Entry
118475062 CDS
T01088
Name
(RefSeq) DNA-directed RNA polymerase subunit beta''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118475062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
118475062
03400 DNA repair and recombination proteins [BR:
zma03400
]
118475062
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118475062
Transcription machinery [BR:
zma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
118475062
DNA repair and recombination proteins [BR:
zma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
118475062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Peptidase_M23
Motif
Other DBs
NCBI-GeneID:
118475062
NCBI-ProteinID:
XP_035819714
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
MAERANLVFHNKEIDGTAMKRLISRLIDHFGMGYTSHILDQIKTLGFHQATTTSISLGIE
DLLTIPSKGWLVQDAEQQSFLLEKHYYYGAIHAVEKLRQSVEIWYATSEYLKQEMNSNFR
ITDPSNPVYLMSFSGARGNASQVHQLVGMRGLMADPQGQMIDLPIQSNLREGLSLTEYII
SCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIIVRRRDCGTIQGISVSPQNGMTEKLFV
QTLIGRVLADDIYIGSRCIASRNQDIGIGLVNRFITAFRAQPFRAQPIYIRTPFTCRSTS
WICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTADLIRSP
SNGKIQFNEDLVHPTRTRHGQPAFLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVE
SEQVIAEIRAGTSTLHFKEKVQKHIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLW
ILSVSMCRSSIASFSLHKDQDQMNTYSFSVDGRYIFDFSMANDQVSHRLLDTFGKKDREI
LDYLTPDRIVFNGHWNCFYPSILQDNSDLLAKKRRNRLVVPLQYHQEQEKERISCLGISM
EIPFMGVLRRNTIFAYFDDPRYRKDKRGSGIVKFRYRTLEEEYRTQEEEYRTREEEYRTR
EEDSEDEYESPENKYRTREGEGEYKILEDEYRTLEDEYETLEDEYGILEDEYRTLEKDSE
EEYGSLENKYRTREGEGEYEILEEESEEEYGSSEDGSEKEYGTLEEDSEEDSEEDSEDEY
GSPEEDSILKKEGFIEHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGV
DTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPPEREKKDSKE
SKKRKNWVYVQRKKFLKSKEKYFVSVRPAVAYEMDEGINLATLFPQDLLQEEDNLQLRLV
NFISHENSKLTQRIYHTNSQFVRTCLVVNWEQEEKEGARASLVEVKTNDLIRDFLRIELV
KSTILYTRRRYDRTSVGLIPNNRLDRNNTNSFYSKAKIQSLSQHQEVIGTLLNRNKEYPS
LMILLASNCSRIGLFKNSKYPNAVKESNPRIPIRDIFGLLGVIVPSISNFSSSYYLLTHN
QILLKKYLFLDNLKQTLQVLQGLKYSLIDENKRISNFDSNIMLEPFHLNWHFLHHDSWEE
TLAIIHLGQFICENLCLFKLHIKKSGQIFIVNMDSFVLRAAKPYLATIGATVHGHYGKIL
YKGDRLVTFIYEKSRSSDITQGLPKVEQIFEARSIDSLSPNLERRIEDWNERIPRILGVP
WGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVF
LPGELIGLLRAERAGRALDESIYYRAILLGITRASLNTQSFISEASFQETARVLAKAALR
GRIDWLKGLKENVVLGGIIPVGTGFQKFVHRSPQDKNLYLEIQKKNLFASEMRDILFLHT
ELVSSDSDVTNNFYETSETPFTPIYTI
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgggccaacctggtctttcataataaagagatagacggaactgctatgaaa
cggcttattagcagattaatagatcatttcggaatgggatatacatcccatatactggat
caaataaagactctgggcttccatcaagccactactacatcgatttctttaggaatcgag
gatcttttaacaataccctctaaaggatggttagtccaagacgcggaacaacagagtttt
cttttggagaaacactattattatggagctatacacgcggtagaaaaattacgccaatcc
gttgagatatggtatgctacaagtgaatatttgaaacaagaaatgaattcgaattttcga
ataacggatccttctaatccagtctatctaatgtctttttcaggagccagaggaaatgca
tctcaggtacaccaattagtaggtatgagagggttaatggcggatcctcaaggacaaatg
attgatttacctattcaaagcaatttacgcgagggactttctttgacagaatatataatt
tcctgctacggagcccgaaaaggggttgtagatactgctgtacgaacagcggatgctggc
tatcttacacgtagacttgttgaagtagttcaacatattattgtgcgtagaagagattgt
ggtactatccaaggtatttctgtgagtcctcaaaatgggatgacggaaaaactttttgtc
caaacactaattggtcgtgtattagcagacgatatatatattggttcacgatgcattgct
tctcgaaatcaagatattggaattggattagtcaatcgattcataactgcctttcgagca
caaccgtttcgagcacaaccaatatatattagaaccccctttacttgccggagcacatct
tggatctgtcaattatgttatgggcggagtcccactcatggggatctggtcgaattgggg
gaagctgtaggtattattgcgggtcaatcaattggggagccggggactcaattaacatta
agaacttttcatactggtggagtattcacagggggtactgccgaccttatacgatccccc
tcgaatggaaaaatccaattcaatgaggatttggttcaccccacacgtacccgtcatggg
cagcctgcttttctatgctatatagacttgcatgtaactattcagagtcaggatattcta
catagtgtgaatattccgttaaaaagcttgattctagtgcaaaatgatcaatatgtagaa
tctgaacaagtaattgcggagattcgtgccggaacgtccactttgcattttaaagaaaag
gtacaaaagcatatttattccgaatcagacggggaaatgcactggagtactgatgtttac
catgcgcccgaatatcaatatggtaatcttcgtcgattaccaaaaacaagccatttatgg
atattgtcagtaagtatgtgcagatccagtatagcatctttttcgctgcacaaggatcaa
gatcaaatgaatacttattctttttctgttgatggaagatatatctttgacttctcaatg
gctaatgatcaagtaagccatagactgttggatacttttggtaaaaaagatagagaaatt
cttgattatttaacgccagatcgaatcgtgttcaacggtcattggaattgtttctatcct
tccattcttcaagataattcagatttgttggcgaaaaagcgaagaaataggctcgtcgtt
ccattacaatatcatcaagaacaagaaaaagagcgaatatcctgtttgggtatttcaatg
gaaataccctttatgggtgttttacgtagaaatactatttttgcttattttgacgatcca
cgatacagaaaagataaaaggggttcaggaattgttaaatttagatataggaccctggag
gaagaatatcggacccaagaggaagagtataggactcgagaggaagaatatcggactcga
gaggaagactcagaagacgaatatgagagcccagagaacaaatataggacccgagaggga
gagggcgaatataaaatcctagaagacgaatataggactctagaggacgaatatgaaacc
ctagaagatgaatatgggatcctagaggacgaatataggactctagagaaagactcagag
gaagaatatgggagcctagagaacaaatataggactcgagagggagagggcgaatatgaa
atcctagaggaagaatcagaagaagaatatgggagctctgaagatggctcagagaaggaa
tatgggactttagaagaagactcagaagaagactcagaggaagactcagaagacgaatat
gggagcccggaggaagattctatcttaaaaaaagagggttttattgagcatcgaggaaca
aaagaatttagtctaaaataccaaaaagaagtagatcggttttttttcattcttcaagaa
ctgcatatcttgccgagatcctcatccctaaaggtacttgacaatagtattattggagtc
gatacacaactcacaaaaaatacaagaagtcgactaggtggattggtccgagtgaagaga
aaaaaaagccatacagaactcaaaatcttttccggagatattcattttcctgaagaggcg
gataagatattaggtggcagtttgataccaccagaaagagaaaaaaaagattctaaggaa
tcaaaaaaaaggaaaaattgggtttatgttcaacggaaaaaatttctcaaaagcaaggaa
aagtattttgtttcggttcgacctgcagtcgcatatgaaatggacgaagggataaattta
gcaacacttttcccgcaggatctcctgcaagaagaggataatctccaacttcgacttgtc
aattttatttctcatgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaa
ttcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaagagggagctcgtgct
tctcttgttgaggtaaaaacaaatgatctaattcgcgatttcctaagaattgagttagtc
aagtctactattttgtatacacgaagaaggtatgataggacaagtgtaggattgattccc
aataataggttagatcgcaacaataccaattccttttattccaaggcgaagattcaatca
cttagccaacatcaagaagttattggcaccttgttgaatcgaaataaagaatatccatct
ttgatgattttgttggcatccaactgttctcgaattggtttattcaagaattctaaatat
cccaatgcggtaaaagaatcgaatcctagaattcctattcgagatatttttgggctctta
ggcgttattgtacctagtatatcgaatttttcttcatcttactatttattaacgcataat
cagatcttgttaaaaaaatacttgttccttgacaatttgaaacaaaccttacaagtactt
caaggacttaaatactctttaatagacgaaaataaaaggatttcgaattttgacagtaac
atcatgttggagccattccatttgaattggcactttctccatcatgactcatgggaagag
acattggcaataattcaccttggacaatttatttgtgaaaatttatgtctatttaaatta
cacataaaaaaatctggtcaaattttcattgttaatatggactcctttgttctaagagca
gctaagccttatttggccactataggagcaactgttcatggtcattatggaaaaatcctt
tacaaaggagataggttagttacgtttatatatgaaaaatcgagatccagtgatataacg
caaggtcttccaaaagtagaacaaatcttcgaagcgcgttcaattgattcactatcgccg
aatctcgaaaggagaattgaggattggaatgaacgtataccaagaattcttggggttccc
tggggattcttgattggagctgagctaaccatagcccaaagtcgtatctctttggttaat
aagatccaaaaggtttatcgatcccaaggggtacagatccataatagacatatagagatt
attatacgccaagtaacatcaaaagtaagggtttccgaagatggaatgtctaatgttttt
ttacctggggaattaataggactattgcgagcggaacgagcagggcgggctttagatgaa
tcgatctattatcgggcaatcttattgggaataacaagggcttccctgaatacccaaagt
ttcatatctgaagcaagttttcaagaaactgctcgagttttagcaaaagctgccctacga
ggtcgtattgattggttgaaaggtctgaaagaaaacgtagttctgggggggattatacct
gttggtaccggattccaaaaatttgtgcatcgttccccacaagacaagaacctttattta
gaaattcaaaaaaaaaatctattcgcgtcggaaatgagagatattttgtttctccataca
gaattagtttcttctgattctgacgtaacaaacaatttctatgaaacatcagagaccccg
tttacccctatttatacgatttaa
DBGET
integrated database retrieval system
