KEGG   Zea mays (maize): 541931
Entry
541931            CDS       T01088                                 
Name
(RefSeq) histone deacetylase HDA101
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
zma  Zea mays (maize)
Pathway
zma03082  ATP-dependent chromatin remodeling
zma03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    541931
   03083 Polycomb repressive complex
    541931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zma03036]
    541931
Enzymes [BR:zma01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     541931
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     541931
   HDAC complexes
    Sin3A-HDAC complex
     541931
    BRAF-HDAC complex
     541931
    REST complex
     541931
    SHIP complex
     541931
    MiDAC complex
     541931
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     541931
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    541931
  Chromatin remodeling factors
   NuRD complex
    541931
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 541931
NCBI-ProteinID: NP_001105064
UniProt: Q94F82
LinkDB
Position
4:complement(239228497..239235491)
AA seq 517 aa
MDPSSAGSGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYG
LLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGL
YSFCQTYAGASVGGAVKLNHGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHH
ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVP
LDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRY
MRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAP
SNMENKNTRQQLDDIRSKLLDNLSKLRHAPSVHFQERVPDTEIPEQDEDQDDPDERHDPD
SDMEVDDHKAVEESSRRSILGIKIKREFGENATRVQDGGRVASEHRGLEPMAEDIGSSKQ
APQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggacccgtcatcggcgggctccggcggcaactccctcccgtccgtcggccccgacggg
cagaagcggcgcgtgtgctacttctacgacccggatgtgggcaactactactacgggcag
ggccatccgatgaagccgcaccgcatccggatgacgcactcgctgctggcgcgctacggc
ctcctcaaccagatgcaggtgtaccgccccaacccggcccgcgaccgcgacctctgccgc
ttccacgccgacgactacatcaacttcctgcgctccgtcacgccggaaacgcagcaggac
cagatccgcctgctcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctc
tacagcttctgccagacctatgcgggcgcctccgtcggcggggccgtcaagctcaaccac
ggccatgacatcgcaatcaactggtcggggggcctgcaccacgccaagaagtgcgaggcg
tcgggcttctgctacgtcaatgacatcgtgctcgccatactcgagctgctcaagcatcac
gagagagttctgtatgtcgatatcgatatccaccatggtgatggagtggaggaggctttc
tacacaacagatagggttatgactgtctcgttccacaagtttggtgattatttcccagga
acaggggatatccgtgacattgggcactcaaaagggaagtactactccctgaatgtccct
ctagatgatgggattgatgatgaaagctaccagtccctttttaagccaatcatgggcaaa
gttatggaggttttccgccctggtgcagttgtgcttcagtgtggtgctgattccttgtct
ggggataggttgggctgcttcaacctctcaatcaaaggtcatgcggaatgtgttaggtat
atgaggtctttcaacgttccattgttgctccttggtggtggtggatataccataagaaat
gttgcacgctgttggtgttatgagactggagttgctcttggccaagagcctgaagacaag
atgcctgttaatgagtactatgaatacttcggtccagattacactcttcatgttgcacca
agtaacatggagaacaaaaatacacgacaacaactggatgatatacgatctaaacttctg
gataatctttcaaaacttcgacatgctcctagtgtccactttcaagagagagttcctgac
acagaaatacctgagcaagatgaagatcaagatgatccagatgaacgacatgatcctgac
tctgatatggaagtggatgaccacaaggctgtggaagagtcatcgaggaggagcattcta
ggtataaaaatcaagagagaatttggtgaaaatgcgaccagagtacaggatggtggcagg
gttgcatctgaacatagaggactggaacccatggcagaagacattggttcctccaagcaa
gctcctcaggcagatgccagtgcaatggccatcgatgaaccaagcaatgtcaagaatgaa
cctgagagctcaactaaattgcaaggccaagcagctgcgtaccacaagccatag

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