Zea mays (maize): 541934
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Entry
541934 CDS
T01088
Name
(RefSeq) nucleosome/chromatin assembly factor C
KO
K10752
histone-binding protein RBBP4
Organism
zma
Zea mays (maize)
Pathway
zma03082
ATP-dependent chromatin remodeling
zma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
541934
03083 Polycomb repressive complex
541934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
541934
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
541934
Histone modification proteins
HAT complexes
HATB complex
541934
HDAC complexes
Sin3A-HDAC complex
541934
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
541934
PRC2.2
541934
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
541934
Heterochromatin formation proteins
Other heterochromatin formation proteins
541934
Chromatin remodeling factors
NuRD complex
541934
NuRF complex
541934
NuRF complex (fruit fly)
541934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
eIF2A
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
541934
NCBI-ProteinID:
NP_001105067
UniProt:
Q94F77
LinkDB
All DBs
Position
8:158507469..158512899
Genome browser
AA seq
453 aa
AA seq
DB search
MKERSGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIVHPGEVNRIREL
PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFALAMCPAEP
YVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDPRGIFHGHD
STVEDVQFCPSSAQEFCSVGDDACLILWDARTGTAPAVKVEKAHSGDVHCVDWNPLDVNY
ILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDGFLN
VWDHEKVGKKKNSNVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQ
IWRMSDLIYRPEDEVLAELENFKAHLASCAPKN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaagcggctccagggcggcggtggacgagcgctacgcgcagtggaagtcg
ctcatccccgtcctctacgactggtttgccaaccacaacctcgtctggccatccctctcc
tgccggtgggggccacagtttgagaaagctacctacaagaatcgtcagcgcctgtaccta
tctgaacagacggatgggagtgtgcctaatactctggttatcgcaaattgtgaagttgtg
aaacctagggttgcagctgctgaacatatctcacagttcaatgaggaagcacggtcacct
tttgtaaagaagtacaaaactatagttcatcctggtgaggttaacagaatcagggaactt
ccacagaacagtaagatcatagccactcacactgacagtccagatgtacttatttgggat
gttgaagcacaaccaaatagacatgctgtcctaggagcaagcgagtctcgccctgatctg
atattaacaggacataaggaaaatgcggaatttgcgcttgccatgtgtccagcagaacca
tatgtcctatcaggaggaaaggacaaatctgttgtcttgtggagcatccaagaccatata
tctgcccttggggattcctcgtcttctcctggagcatctggcagcaagcagtctattaaa
actgcaaatgaaaaggagagccctaaagttgatcctagaggtatatttcatggacatgac
agcacggttgaagatgttcagttctgcccttccagtgcgcaggagttttgtagtgtgggt
gatgatgcttgtcttattctgtgggatgctcgaactggcactgccccagctgttaaggtt
gagaaagctcacagtggagatgttcattgtgttgattggaatccccttgatgttaactat
atcttaactgggtctgccgataactctgtccgaatgtgggatcgtcggaatctgggttca
ggaggagctggttctccaattcacaaatttgaaggccataaagctgctgttctttgtgtt
cagtggtcacctgacagagcatctgtttttggaagttctgcagaagatggtttcttaaac
gtgtgggatcatgagaaggtggggaagaagaaaaattctaatgtcccagccgggcttttc
tttcagcacgctggtcatagggataagattgtagacttccactggaattcgtcagatcct
tggacaattgtcagtgtctctgatgatggcgagagcactggtggaggtggaacactgcag
atttggcgcatgagtgatttgatctaccgcccagaggatgaagttcttgcagagctggag
aatttcaaggctcatttggccagctgtgcaccgaagaattga
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