Zea mays (maize): 542007
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Entry
542007 CDS
T01088
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
542007
03036 Chromosome and associated proteins [BR:
zma03036
]
542007
Transcription factors [BR:
zma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
542007
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
542007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Nop14
YL1
Motif
Other DBs
NCBI-GeneID:
542007
NCBI-ProteinID:
NP_001334293
UniProt:
C0PG86
B6SH59
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Position
8:complement(22409885..22416610)
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AA seq
639 aa
AA seq
DB search
MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY
QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLT
FMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDESRPPAHILWETILKFADVGSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALSK
ELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDEE
SDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQKRKHKGRDD
EGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSG
EEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcaccacttcaacaacatcctcctcggagggcgcggcggcacaaaccct
ggtcagtttaaagtgcattctggtggacttgcatggaagagacaaggtggaggaaagacc
attgagatcgacaaagctgatgtaactgcagttacttggatgaaagtccccagagcatat
cagcttggagtcaggattaaggctggcctgttctacagatttattggcttccgtgaacag
gatgtaagcaacttgaccaacttcatacaaaagaatatgggtgtcacaccagatgaaaaa
cagctttctgttagtggccagaattggggagggattgatatagatggaaacatgctaacc
tttatggttggttcaaagcaagcatttgaggtgtccctaccagatgttgcacaaacccag
atgcaaggaaaaacagatgttctcttagagcttcatgttgatgatactactggagccaat
gagaaagactccctcatggatttgagttttcatgtgcctacttcgaatactcagtttgtt
ggggatgagagtcgccctccggctcatattttatgggagaccatattgaaatttgctgat
gttggttcttctgaagaaccagttgtcacatttgaaggaattgcgatccttacaccaaga
ggacgttatagtgttgaacttcatctgtcatttctgcgactccaaggacaagctaacgat
tttaaaatccaatacagcagtattgttcgcctctttcttttgccgaagtcaaacaatcct
catacatttgttgttatcactcttgatccaccaatccgtaaaggacaaacattgtatcct
cacattgttattcagtttgagacagaggcagtagtggaaagagatctggcattgagtaaa
gaactgttggttgaaaaatacaaggacaggcttgaggaatcttacaagggtctaatacat
gaggtatttaccaaagtccttcgtggtctatctggtgctaaagtcacaaggccaggttct
ttcagaagttgccaagatggatatgcagttaaatcatctctcaaagctgaagatggactg
ttgtatccactggaaaagggtttcttcttcctgccaaagccacctacactcattcttcat
gaggagattgagtttgttgagtttgaacgtcatggtgctgggggtgccagtatatcatct
cactattttgacctccttgtcaaactgaaaaatgaccaagagcatctcttcagaaacatt
caaaggaatgaataccacaacctcttcaatttcatcaatggaaagaacattaaaataatg
aaccttggaggagatggtcaaggtgcaagtggtgtagttacagatgttctacgagacact
gatgatgatgctgttgatccacatctagagcgtattaagaatcaggccggggatgaggaa
agcgatgaagaggatgaagatttcgttgcagacaaggatgatagtggatctcctactgat
gactcaggtgatgaggaatcagatgctagtgatagtggtggtgaaaaggagaaatcatcc
aagaaggaagcaagcagttcaaagccagttcagaaaagaaagcataagggcagggatgac
gaaggacaagagaagaaaaagccaaagaagaaaaaagatccgaatgctccgaaacgagcc
atgaccccgttcatgtatttctcaatggctgagcgaggaaacatgaagagcagcaaccca
gatttgcctacgactgagatcgcaaagaagcttggggagatgtggcaaaagatgtcaggc
gaagagaaacagccttacatccagcaggcccaggtcgacaagaaacgttatgaaaaagaa
tccgctgtctatcgcggtgaagctacagtcgatgtggattctgggaacgagtctgactag
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