KEGG   Zea mays (maize): 542084
Entry
542084            CDS       T01088                                 
Name
(RefSeq) nucleosome/chromatin assembly factor 104
  KO
K10752  histone-binding protein RBBP4
Organism
zma  Zea mays (maize)
Pathway
zma03082  ATP-dependent chromatin remodeling
zma03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    542084
   03083 Polycomb repressive complex
    542084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zma03036]
    542084
Chromosome and associated proteins [BR:zma03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     542084
  Histone modification proteins
   HAT complexes
    HATB complex
     542084
   HDAC complexes
    Sin3A-HDAC complex
     542084
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     542084
    PRC2.2
     542084
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     542084
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    542084
  Chromatin remodeling factors
   NuRD complex
    542084
   NuRF complex
    542084
   NuRF complex (fruit fly)
    542084
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML MIOS_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 542084
NCBI-ProteinID: NP_001105188
UniProt: Q8LPU3
LinkDB
Position
7:complement(184544496..184553736)
AA seq 382 aa
MEEYRNWKKNAAVLYDLVISHPLEWPSLTVQWLPSESSARSHRLVVGTHTSDEAPNNLMV
LDAVLPLPPRLAAAVAASGGAVPFPSVSVSRVAPHRGEVNRARCMPQRPYTVATKTCVDE
VHVYHLGDDDGSGKSGAEVVLKGHEAEGYGLSWSPMKEGWLLSGSYDKKICLWDISSGSG
APVLDAQQVFVAHEDLVEDVAWHLKDEHIFGSVGDDCKLMMWDLRTNKPEQSILAHRKEV
NSLSFNPFNEWILATASGDTTINLFDMRKLSRSLHTFDSHEAEVFQVEWNPNLATVLASS
AADKRVMIWDINRIGDEQSEEDADDGPPELLFVHGGHTDKISELSWNPSEKWAIASVSED
NILQIWEMAESIYCDDLSMQVN
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggaggagtaccggaactggaagaagaacgcggcggtgctttacgacctcgtcatctcc
cacccgctcgagtggccatcgctcaccgtgcagtggctcccatcggagtcctcggcccgc
agccaccggctcgtcgtgggtacgcacacctccgacgaggcccccaacaacctcatggtc
ttggacgcggtgctaccgctcccacctcgcctcgctgcagccgtcgctgcctcgggcggc
gccgtcccgttcccatccgtatccgtctcgcgcgtggcgccacaccgtggcgaggtcaac
cgcgcgcgctgcatgccgcagcgtccctatacggtggccaccaaaacgtgcgtcgacgag
gtgcacgtgtaccatctcggcgatgacgacggcagcgggaagagcggcgccgaagttgtg
ctcaaggggcatgaggcggagggttatggcttgtcatggagcccgatgaaggaggggtgg
ctgctgagcggctcgtatgataagaagatttgcttgtgggacatctcctctgggagtggc
gctcctgttctggatgcacaacaggtgtttgtggctcatgaggatctcgttgaagatgtt
gcttggcacctgaaggatgaacatatatttggatctgttggggatgactgtaagttgatg
atgtgggacttgcgtacaaacaaaccagaacaatctattcttgcacatcgaaaggaggtc
aactctttgtcattcaatccattcaatgaatggatattggctacagcatctggagacaca
actatcaacctatttgacatgcgaaaactatctagaagcttgcatacttttgacagtcat
gaggcggaggtgtttcaggttgaatggaatccaaatttggctactgtattagcttcatct
gccgcagacaagagagtgatgatatgggatattaataggattggcgatgagcagtcagag
gaagacgcagacgacggaccaccggagctgctgttcgttcatggaggccacacagacaag
atatcagagctgtcgtggaatcctagcgagaaatgggccattgccagcgtgtctgaagac
aacatcctgcagatatgggagatggcagaaagcatatactgtgatgacctctccatgcag
gttaactga

DBGET integrated database retrieval system