Zea mays (maize): 542087
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Entry
542087 CDS
T01088
Name
(RefSeq) nucleosome/chromatin assembly factor group C
KO
K10752
histone-binding protein RBBP4
Organism
zma
Zea mays (maize)
Pathway
zma03082
ATP-dependent chromatin remodeling
zma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
542087
03083 Polycomb repressive complex
542087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
542087
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
542087
Histone modification proteins
HAT complexes
HATB complex
542087
HDAC complexes
Sin3A-HDAC complex
542087
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
542087
PRC2.2
542087
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
542087
Heterochromatin formation proteins
Other heterochromatin formation proteins
542087
Chromatin remodeling factors
NuRD complex
542087
NuRF complex
542087
NuRF complex (fruit fly)
542087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
eIF2A
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
542087
NCBI-ProteinID:
NP_001105191
UniProt:
Q8L8G4
LinkDB
All DBs
Position
3:complement(209279817..209286553)
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AA seq
453 aa
AA seq
DB search
MKERGGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIVHPGEVNRIREL
PQNSKIIATHTDSPDVLVWDVEAQPNRHAVLGASESRPDLILTGHQENAEFALAMCPAEP
YVLSGGKDKFVVLWSIQDHISALGDSSSSPGASGSKQSGKIANEKESPKVDPRGIFHGHD
STVEDVQFCPSSAQEFCSVGDDACLILWDARTGTDPAVKVEKAHSGDVHCVDWNPLDVNY
ILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDGFLN
VWDHEKVGKKKNSNVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQ
IWRMSDLIYRPEDEVLTELENFKAHLASCAPRN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaggcggctccagggcggcagtggacgagcgctacgcgcagtggaagtcg
ctcatccccgttctctacgactggtttgccaaccacaacctcgtttggccatccctctcc
tgccggtgggggccacagtttgagaaagctacctacaagaatcgtcaacgcctttaccta
tctgaacagaccgatgggagtgtgcctaatactctggttatcgcaaactgtgaagttgtg
aaaccaagggttgcagctgctgaacatatctcgcagtttaacgaggaagcacgatcacct
tttgtaaagaagtacaagactatagttcatcctggtgaagttaacagaatcagggagctt
ccacagaacagtaagatcatagccacacacactgacagtccagatgtacttgtttgggat
gttgaagcacaaccaaatagacatgctgtcttaggagcttctgaatctcgtcctgatctg
atattaacgggacaccaggaaaatgcagaatttgcgcttgccatgtgtccagcagaacca
tatgtcctgtcaggaggaaaggacaaatttgttgtcttgtggagcatccaagaccacata
tctgcccttggggattcctcgtcttctcccggagcatctggcagcaagcagtctggcaaa
attgcaaatgaaaaggagagtcctaaagttgatcctagaggtatattccatggccatgac
agtactgttgaagatgttcagttctgcccttccagtgcgcaggagttttgtagtgtgggt
gatgatgcttgtcttattctgtgggatgctcgaactggcactgacccagctgttaaggtt
gagaaagctcacagtggagatgttcattgtgttgattggaatccccttgatgttaactat
atcttaactggttctgccgataactctgtccgaatgtgggatcgtcgcaatctgggttcg
ggaggagctggttctccaattcacaaatttgagggccataaagctgctgttctttgtgtt
cagtggtcacctgacagagcatctgtttttggaagttctgcagaagatggtttcttaaat
gtttgggaccatgagaaggttgggaagaagaaaaattctaatgtcccagctgggcttttc
tttcagcatgctggtcatagggataagatcgtagacttccactggaattcgtcagatcct
tggacaattgtcagtgtctcagatgatggtgagagcactggtggaggtggaacactgcag
atatggcgaatgagtgatttgatctaccgcccagaggatgaagttcttacagagctggag
aatttcaaggctcacctggccagttgcgctccgaggaattga
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