Zea mays (maize): 542174
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Entry
542174 CDS
T01088
Name
(RefSeq) arginine/serine-rich splicing factor 1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
542174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
542174
Spliceosome [BR:
zma03041
]
Common components
Common spliceosomal components
SR proteins
542174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_3
RRM_Nup35
SelO
RRM_fung
Motif
Other DBs
NCBI-GeneID:
542174
NCBI-ProteinID:
NP_001335615
UniProt:
Q6IVD5
LinkDB
All DBs
Position
10:complement(103941817..103946055)
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AA seq
240 aa
AA seq
DB search
MRPVFVGNLDYDTRHSELDHLFYRYGRVERIDMKSGFAFVYFEDERDGSDAIRALDGYPF
GPGRRRLSVEWSRGDRAARRDGNKPEVNTKPTKTLFVINFDPMDTRVSDIERHFAPFGNI
SSVRIRKNFAFVRFETLEEARKALEATHATMLLDRVISVEYAFRDDDERSDRYDSPRRGG
GYGRRGDSPAYRSRPSPDYGRPASPVYGSYGRSRSPVRDRYRRSPAYRSRSPPANRRAYD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggttttcgtggggaacctagactatgatacccgccactcggagctcgaccac
ctcttctaccgctatggcagggtcgagcgcatcgacatgaagtcaggctttgcttttgtc
tactttgaggatgaacgtgatggcagtgatgccatacgtgctcttgatggttatccattt
ggccctggcagacgcaggctttcagtagagtggtcacggggtgatcgagctgctagacgt
gatggcaacaaaccagaagtaaatactaagccaactaaaacattgtttgtcattaacttt
gatccaatggacacaagagtcagtgatatcgaaagacactttgcaccatttgggaacata
tcaagtgttaggataaggaagaactttgcttttgtccggtttgaaacactagaagaagcc
cgtaaggctcttgaagctactcatgctaccatgcttttggatagggtgatttctgttgag
tatgcctttagggatgatgatgaacggagtgataggtacgacagcccaagaagaggtggt
ggatatggtaggcggggggatagcccagcgtacagatcacgtcctagtccagactatggt
cgcccagcaagtcctgtatatggttcgtatggcaggagcagaagtcctgttcgtgaccgc
tatcggagatctcctgcttaccgatcaagatccccacctgccaaccgaagagcatatgac
taa
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