Zea mays (maize): 542707
Help
Entry
542707 CDS
T01088
Name
(RefSeq) chaperonin CPN60-2, mitochondrial precursor
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
542707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
542707
03110 Chaperones and folding catalysts [BR:
zma03110
]
542707
03029 Mitochondrial biogenesis [BR:
zma03029
]
542707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zma04147
]
542707
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
542707
Messenger RNA biogenesis [BR:
zma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
542707
Chaperones and folding catalysts [BR:
zma03110
]
Heat shock proteins
HSP60 / Chaperonin
542707
Mitochondrial biogenesis [BR:
zma03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
542707
Exosome [BR:
zma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
542707
Exosomal proteins of other body fluids (saliva and urine)
542707
Exosomal proteins of breast cancer cells
542707
Exosomal proteins of colorectal cancer cells
542707
Exosomal proteins of bladder cancer cells
542707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
CO_dh
Motif
Other DBs
NCBI-GeneID:
542707
NCBI-ProteinID:
NP_001105690
UniProt:
Q43298
A0A1R3MBV7
A0A8J8XYJ2
LinkDB
All DBs
Position
1:complement(240289035..240294654)
Genome browser
AA seq
576 aa
AA seq
DB search
MYRAAASLASKARQAGSSSAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKAQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIINKL
RAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENVEPHMLGSCKKVTVSK
DDTVILDGAGDKKSIEERADQIRSAVENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA
EVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEEAPAPAMGGMGGMDY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggccgctagcctcgcctccaaggcgcggcaagccgggagcagctccgcc
gctcgccaggttggaagcaggcttgcctggagcaggaactatgctgccaaggacatcaag
tttggtgttgaggcccgtgctctgatgttgaggggtgttgaggagttggcagacgctgtc
aaagtgacaatgggtcctaaggggcgcaatgtggttattgagcaaagcttcggtgcaccg
aaagtcacaaaggatggtgtgactgttgcgaagagcattgaatttaaggatagagtaaag
aatgttggtgcgagccttgtgaaacaggttgctaatgcaactaatgacactgctggtgat
ggtaccacatgtgctactgttttgacaaaagcaatatttactgaggggtgcaaatctgtt
gcggctggaatgaatgcaatggatttaaggcgtggaatctcaatggctgttgatgctgtt
gtgaccaatctgaagggcatggccagaatgattagcacttcagaagaaattgcacaggtg
ggtacaatatcagcaaatggagaaagggaaattggtgagcttattgccaaggctatggag
aaggttggcaaagagggtgtgatcactattgcggatggcaacaccctttataatgagctt
gaagttgtggagggtatgaaacttgacagaggttacatctctccgtacttcattaccaac
tcaaaagcccagaaatgtgaactggaagacccattgatcttaattcatgacaagaaagtg
acaaatatgcatgctgtggttaaggttttagaaatggctctaaagaaacaaaggcctcta
ctgattgttgcagaagatgtggaaagtgaagcattaggtactctgattattaacaagctt
cgtgcaggcatcaaggtctgtgctgtcaaagctcctggttttggggaaaacaggaaggca
aacttacaggacctcgctatccttaccggaggagaggtaataactgaagagctaggaatg
aaccttgagaatgttgagcctcacatgctgggttcatgcaaaaaggtgactgtctctaag
gatgacactgttattcttgatggcgctggagacaaaaagtctattgaagagagggcagac
cagattagatcagcagttgagaacagcacttcagattatgacaaggaaaagctccaggaa
cggttggcaaagctctctggaggtgttgctgttctgaagattggaggagccagcgaagca
gaagttggtgagaagaaggatagagtgacagatgcactgaatgctactaaagctgctgtt
gaagagggcattgtaccaggtggtggtgttgctcttctctatgcatcgaaggagctcgat
aagttgcagacagcaaattttgatcagaagattggtgtgcaaatcattcagaatgctttg
aagacacctgtacacaccattgcctccaatgctggggtggagggagcagtagttgtgggc
aagcttttggagcaaggaaacactgaccttggttatgatgctgctaaagacgaatacgtt
gacatggtgaaggctggtatcattgatccgctaaaggtcatcagaactgcattggtggat
gctgctagtgtgtcgtccctgatgaccaccacggaatccataattgtagagatccccaag
gaagaggcaccggctccagcaatgggtggcatgggtggaatggattactaa
DBGET
integrated database retrieval system
