Zea mays (maize): 845226
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Entry
845226 CDS
T01088
Symbol
rpoC1, ZemaCp014
Name
(RefSeq) RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
845226 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
845226 (rpoC1)
03400 DNA repair and recombination proteins [BR:
zma03400
]
845226 (rpoC1)
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
845226 (rpoC1)
Transcription machinery [BR:
zma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
845226 (rpoC1)
DNA repair and recombination proteins [BR:
zma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
845226 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
845226
NCBI-ProteinID:
NP_043016
UniProt:
P16024
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All DBs
Position
Pltd:24733..26784
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AA seq
683 aa
AA seq
DB search
MIDQYKHKQLQIGLVSPQQIKAWAKKILPNGEVVGEVTRPSTFHYKTDKPEKDGLFCERI
FGPIKSGICACGNSRASVRENEDERFCQKCGVEFVDSRIRRYQMGYIKLACPVTHVWYLK
GLPSYIANLLDKPLKKLEGLVYGDFSFARPSAKKPTFLRLRGLFEDEISSCNHSISPFFS
TPGFATFRNREIATGAGAIREQLADLDLRIIIENSLVEWKELEDEGYSGDEWEDRKRRIR
KVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVI
RRNNNLAYLLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVI
EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPLEIAIKLFQLFVIRDLITKRAT
SNVRIAKRKIWEKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPTLVEGRTICLHP
LVCKGFNADFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDMLIGLY
VLTIGNRLGICANRYNSCGNSPNKKVNYNNNNYYKYTKDKEPHFSSSYDALGAYRQKRIG
LNSPLWLRWKLDQRIVGSREVPIEVQYESFGTYHEIYAHYLVVGNRKKEIRSIYIRTTLG
HISFYREIEEAIQGFSRAYSYTI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccaatataaacataaacaacttcaaattggactcgtttcccctcaacaaata
aaggcttgggctaaaaaaatcctacctaatggggaagtcgttggcgaagtcacaaggccc
tccacttttcattataaaaccgataaaccagaaaaagatggattgttttgcgaaagaatc
tttggacccataaaaagcggaatttgtgcttgtggaaactctcgagcgagcgtacgtgaa
aacgaagacgaaagattttgccaaaaatgcggggtagaatttgttgattctcggatacga
agatatcaaatgggatacatcaaactagcatgtccagtgactcatgtgtggtatttgaaa
ggtcttcctagttatattgcgaatcttttagataaaccccttaagaaattggagggccta
gtatatggtgatttctcttttgctaggcccagcgctaaaaaacctactttcttacgatta
cggggtttattcgaagatgaaatttcatcctgtaaccacagtatttctccctttttttct
accccaggctttgcaacatttcgaaatcgggaaattgcaacaggagcaggcgctattaga
gaacaattagcagatttagatttgcgaattattatagagaattctttggttgaatggaag
gaattagaagacgaggggtatagtggagatgaatgggaagatagaaaaagacgaataaga
aaagtttttttgattagacgcatgcaattggcgaaacattttattcaaacaaatgtagaa
ccagaatggatggttttgtgcttattaccggttcttcctcccgaattgagacccattgtt
tatagatctggggataaagtagtgacttcagatattaatgaactttataagagagttatc
cgtcggaacaacaaccttgcctatctattaaaaagaagtgaattagcaccagcagattta
gtaatgtgccaggaaaaattggtacaagaagccgtggatacacttcttgatagtgggtcc
cgcgggcaaccgacgagggatggtcacaataaagtatacaaatcactttcagatgtaatt
gagggtaaagaggggaggtttcgcgagactctgcttgggaaacgggtcgattactcgggg
cgttctgtcattgttgtgggtccttcgctttcattacatcaatgtggattacctctagag
atagcaataaagctttttcagctatttgtaattcgcgatttaatcacgaaacgtgctact
tctaatgtcaggattgctaaaaggaaaatttgggaaaaggaacccattgtatgggaaata
cttcaagaagttatgcggggacatcctgtactgttgaacagagcacctaccctgcataga
ttaggcatacaggccttccaacccactttagtagagggacgtactatttgtttacatcca
ttagtgtgtaagggtttcaatgcggactttgatggggatcaaatggctgttcacctacct
ttatccttggaagctcaggcggaagcccgtttacttatgttttctcatatgaatctcctg
tctcccgctattggagatcctatttgcgtgccaacccaagacatgcttatcggactttat
gtattaacgattggaaaccgtctaggtatttgtgcaaatagatataatagttgcggaaac
tctccaaataaaaaagtaaactacaataataacaattattataagtatacgaaagataaa
gaaccccatttttctagttcctatgatgcactgggagcttatagacaaaaacgaatcggt
ttaaacagtcccttgtggctccgatggaaactagatcaacgcatcgttgggtcaagagaa
gttccgattgaagttcaatatgaatcttttgggacttatcatgagatttatgcccactat
ctagtagtgggaaatagaaaaaaagaaatccgttctatatacattcgaaccactcttggt
catatttctttttatagagaaatagaggaagccatacaaggatttagtcgggcctattca
tacactatctaa
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